Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1568 ATGAGAAGGGCCAGCTGCTCCCCATTACTCTCTTTTTCTCTACCACTTCCTTCTTTCTCTCCACGCCTCTCCGCCGCCGTCACGGCTGGGAGCTCCGGTCGGGATAATGAACCATTATCCCCCACATTTCTTCTGTCCCTTTCCCTTTCCCTTCCACTTCTCTTTTCTATTATACTGTTCGCTTTTGCCGCCTCTGGGTTTGCCGTTCAAATTCCGCCGCCAGCGGTTGTTCCACCGGAAGACTTGCTGCTGCCGTCCGACGCCGTTTCGCTTCTTTCGTTCAAGTCTAAAGCTGACTTGGACAACAAGCTTCTTTACACTCTCAATGAGCGGTTTGACTACTGTCAATGGCAGGGCGTGAAGTGCGTCCAGGGTCGTGTTGTTCGTCTGGTTCTTCAATCGTTTGGTCTCCGAGGAATATTGGCCCCGAATACAGTGTCTAAGCTCGACCAGCTTCGAATCCTCAGCCTGCATAATAACTCGCTCGAGGGACCCATTCCTGACCTATCCGGACTCTTCAATCTGAAATCTCTGTTCCTTGGCCGAAACTCCTTCGTTGGGTCTTTTCCGCCGTCGATTCTCACTCTTCACCGGCTTCAGACTCTTGATCTTTCCTATAACAACTTCACCGGTCCGCTTCCGGTGAGGCTTTCCTCGTTGGACCGGCTCATTACACTCCGGCTCGAATGGAATGGTTTTAGTGGAAGTATTCCGCCCTTAAATCAGTCATTTCTTGAGATCTTCAACGTAACGGGGAACAATCTAACCGGGCAAATTCCGGTGACCCCCACTCTCTCGCGTTTCAACACGTCGTCGTTTTTCTGGAACCCAGATCTCTGTGGCGAGATCGTCAACAAGGCATGCCATTCACCGGCTCCTTTCTTTGAAGCTTCCAATGCCACTGCCCCATCTCCCCCTTCCGTCCAAAGCGCACAGTCGCAGGACGTAGTTCTCTCTCCAGTCTCTCATGCTAAGCACAAGGAAACCGGTATGATTTTGGGGCTTTCCGTTGGCGCCGCAGTTTTAGTAGCAGGTCTTTTATGTTTCTTCGTAGCAGCCAGAACCCAAAGAAGACAAACTGTATCAAAGCCAGCAATGGCGCAATTTGAACCCGAAATTGCATTTTCCACAGCTTCCGCAATCGACGAGCGAGTCGACAGGAAGGGCGAATTTCAAGCGAAAGTGAAAGAAATGGAAGAAATTCCAAAAGCCCAGAAGAGTGGTAGTCTTATATTTTGTGAAGGGGAGGCAGAATTATTCAGCTTAGAGCAGTTAATGAGGGCTTCGGCGGAGCTACTCGGTAGAGGCACAATGGGAACTACATACAAAGCCGTGCTCTGCAACCAGCTAATCGTAACGGTGAAGCGTCTTGATGCTACTAAGACCGCCACAACGAGCAGCGAAGTGTTCGACCGGCATTTGGAAGCAGTGGGTGCGCTTCGTCATCCCAATTTGGTGCCAGTTAGGGCCTACTTTCAAGCCAGGGGAGAGAGATTAGTGGTTTACGATTACCAACCTAACGGCAGTCTTTACAACCTCATTCACGGTTCAAGATCAGCAAGGGCTAAGCCTTTGCATTGGACATCATGCTTGAAGATTGCAGAAGATTTAGCTCAGGGCATTGCTTTTATACATCAAGCTTCTAAGTTGATCCATGGCAACTTGAAGTCTACCAATGTTCTCCTAGGAGCAGATTTTGAGGCCTGTCTCACAGACTATGGCCTTTCTGTTCTGGCAGAGTCCCCTGAAGATCCAGATTCTTCACGCTACCAAGCCCCTGAAACTCGCAATTCCAGCCGCAATGCCACCCACAAGAGCGATGTCTATGCCTTTGGCATCCTCTTGCTGGAGCTTTTGACAGGAAGTCATCCTTCACACCATCCATTTCTTGAGCCAACTGATATTCCAGAATGGGTAAGGGCAGTTAGGGAAGATGATGGTGGGGATAGTAACCAACTTGGAATGCTTACTGAGGTGGCTAGCATCTGTAGTACTACATCCCCTGAACAGAGGCCCCCGATGTGGCAAGTTTTGAAAATGATACTGGAGATTAAAGAGAGTGTCATGATAGAGGACAGTGAATCTAGTGGCTTTTAA 2097 49.45 MRRASCSPLLSFSLPLPSFSPRLSAAVTAGSSGRDNEPLSPTFLLSLSLSLPLLFSIILFAFAASGFAVQIPPPAVVPPEDLLLPSDAVSLLSFKSKADLDNKLLYTLNERFDYCQWQGVKCVQGRVVRLVLQSFGLRGILAPNTVSKLDQLRILSLHNNSLEGPIPDLSGLFNLKSLFLGRNSFVGSFPPSILTLHRLQTLDLSYNNFTGPLPVRLSSLDRLITLRLEWNGFSGSIPPLNQSFLEIFNVTGNNLTGQIPVTPTLSRFNTSSFFWNPDLCGEIVNKACHSPAPFFEASNATAPSPPSVQSAQSQDVVLSPVSHAKHKETGMILGLSVGAAVLVAGLLCFFVAARTQRRQTVSKPAMAQFEPEIAFSTASAIDERVDRKGEFQAKVKEMEEIPKAQKSGSLIFCEGEAELFSLEQLMRASAELLGRGTMGTTYKAVLCNQLIVTVKRLDATKTATTSSEVFDRHLEAVGALRHPNLVPVRAYFQARGERLVVYDYQPNGSLYNLIHGSRSARAKPLHWTSCLKIAEDLAQGIAFIHQASKLIHGNLKSTNVLLGADFEACLTDYGLSVLAESPEDPDSSRYQAPETRNSSRNATHKSDVYAFGILLLELLTGSHPSHHPFLEPTDIPEWVRAVREDDGGDSNQLGMLTEVASICSTTSPEQRPPMWQVLKMILEIKESVMIEDSESSGF 698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 71923317 71927117 - Tan0004563.1 Tan03g1568 747072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1568 698 ProSiteProfiles Protein kinase domain profile. 427 689 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1568 698 Gene3D Transferase(Phosphotransferase) domain 1 506 696 - -
Tan03g1568 698 Pfam Leucine Rich Repeat 151 168 IPR001611 GO:0005515(InterPro)
Tan03g1568 698 Pfam Leucine Rich Repeat 198 220 IPR001611 GO:0005515(InterPro)
Tan03g1568 698 MobiDBLite consensus disorder prediction 580 601 - -
Tan03g1568 698 Gene3D Ribonuclease Inhibitor 242 291 IPR032675 -
Tan03g1568 698 Gene3D Ribonuclease Inhibitor 85 241 IPR032675 -
Tan03g1568 698 SUPERFAMILY L domain-like 87 281 - -
Tan03g1568 698 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 86 686 IPR046959 -
Tan03g1568 698 FunFam Probable inactive receptor kinase At5g67200 86 196 - -
Tan03g1568 698 FunFam Leucine-rich repeat receptor-like protein kinase 198 290 - -
Tan03g1568 698 SUPERFAMILY Protein kinase-like (PK-like) 431 685 IPR011009 -
Tan03g1568 698 Gene3D Phosphorylase Kinase; domain 1 392 504 - -
Tan03g1568 698 Pfam Protein tyrosine and serine/threonine kinase 431 679 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1568 698 ProSiteProfiles Leucine-rich repeat profile. 151 173 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1568 Tan-Chr3:71923317 Tan04g1641 Tan-Chr4:32025416 5.40E-111 dispersed
Tan03g1568 Tan-Chr3:71923317 Tan08g0198 Tan-Chr8:1771376 4.70E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67336 PF00069 Pkinase 2.50E-29 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1568 - - - 0.0