Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1577 ATGGATGATGGAACTTCTAATAGTTCAACACAATCTGCAGTCAACAATCCAGCTCCAACAGTCCATAGGCAAAATAGTAAAGGAGACCATTTGACATCTATTTTATCTACGTCTGGAATATCTTCTTGGGCTAAGAGTTTTAGAAATTCACAACCACCTGAAGCAGCAGAAAATGACTCTAAGGCAGGAAATGGTGGGATGTCAGCAATTGCTCGTTTCAGTAGTGGCTTTGGATTGCGGATACCTTCAATGTCTCCTGTACGAGATGATGGTGTTGCAGATACCAAATCAGCAACGCAATCTGGTGTTTTTGAATCATTCACGAAAGGTTTAGTTGACACATCTCAGAATGCAGTAAAGGCTATGCAGGTAAAGGCACGCCATATTGTCTCTCAGAACAAACGAAGATATCAGGAAGGAGAATTTGATTTGGATATGACATATATCACCGAAAATATAATTGCTATGGGGTTTCCTGCTGGTCACATGAGCTCTGGTTTATTTGGATTCCTTGAGGGATTTTACAGAAATCATATGGAAGAAGTGATCAGATTTTTTGAATCTCATCATAAGGGAAAATACAAAGTTTACAATCTTTGCTCAGAGCGTTTGTATGATGCCTCATTATTTGAGGGGAAGGTTGCACATTTCCCGTTTGATGATCATAATTGTCCTCCTATCCATCTCATAAAATCATTTTGTCAAAGTGCATATGCGTGGTTAAAGGAGGATATTGAGAATGTGGTTGTTGTTCATTGTAAAGCTGGTATGGCAAGAACAGGGCTAATGATTTGCAGCCTCCTTTTATTCCTAAAGTTTTTCCAATCATCAGCAGAGGCAATTGATTATTACAATCAGAAAAGATGCGTAGATGGAAAGGCTTTGGTTCTTCCTAGCCAGATTAGATATGTCAAATATTTTGAGCACATTTCAACACATTTCAACGGAAATACTCCACCTGGACGGAGGTGCATGCTGAGAGGTTTTCGGCTTCACAAGTGCCCGTATTGGGTTAGGCCTTCCATTACAATATCAAATCACAGTGAGATTTTGTTCTCAACAAAAAACCATCCAAAGACAAAGAATTTAATGCCAGAAGATTTCTGGATTAGGGCACCAAAGAAAGGATTTGTTGTCTTTGCACTGCCAGGGGAGCCTGGTTTGACAGAGTTATCTGGGGACTTCAAGATTCATTTTCATGACCGACATGGAGATTTTTATTGTTGGTTAAATACAACAATGACAGAAAACAAAGTATTATTAAGTGACACAGATCTTGATGGTTTTGATAAGAGAAAACTTCCTACCCCTGGATTCCAGGTCGAAGTAGTGATGATAGACTATAATGGTACTTTGCCAACACGATTGAAAACTGATTCTGATGGCAAAGGATCTGATCGTCGCTCCATTCATGATCGGGCATCAGATCATGAAGCCGCACAATCCAGCAAAAACAAAATTCCTGAGGGTGAAGAAAATGATGACGATGTATTCTCTGATAGTGATGAAGAAAATTGTGACACAAAAACCAGTCTAGCTCAATCAACTTCTGGAAATGCAAAAGCTGAACATTCATCAACAGCTATTGCTTCTGAAAAAATTGGGAGCTTAGCGCATGAAACTAATCATTTGTCACTCGGGAACAGGAAAACCTACAAATCAATGCTCCAAAGACTCAAACTTTGA 1686 39.26 MDDGTSNSSTQSAVNNPAPTVHRQNSKGDHLTSILSTSGISSWAKSFRNSQPPEAAENDSKAGNGGMSAIARFSSGFGLRIPSMSPVRDDGVADTKSATQSGVFESFTKGLVDTSQNAVKAMQVKARHIVSQNKRRYQEGEFDLDMTYITENIIAMGFPAGHMSSGLFGFLEGFYRNHMEEVIRFFESHHKGKYKVYNLCSERLYDASLFEGKVAHFPFDDHNCPPIHLIKSFCQSAYAWLKEDIENVVVVHCKAGMARTGLMICSLLLFLKFFQSSAEAIDYYNQKRCVDGKALVLPSQIRYVKYFEHISTHFNGNTPPGRRCMLRGFRLHKCPYWVRPSITISNHSEILFSTKNHPKTKNLMPEDFWIRAPKKGFVVFALPGEPGLTELSGDFKIHFHDRHGDFYCWLNTTMTENKVLLSDTDLDGFDKRKLPTPGFQVEVVMIDYNGTLPTRLKTDSDGKGSDRRSIHDRASDHEAAQSSKNKIPEGEENDDDVFSDSDEENCDTKTSLAQSTSGNAKAEHSSTAIASEKIGSLAHETNHLSLGNRKTYKSMLQRLKL 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 72002527 72007906 + Tan0010329.3 Tan03g1577 747081

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1577 561 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 249 288 IPR000387 GO:0016311(InterPro)
Tan03g1577 561 Gene3D Protein tyrosine phosphatase superfamily 120 317 IPR029021 -
Tan03g1577 561 ProSiteProfiles Phosphatase tensin-type domain profile. 135 314 IPR029023 -
Tan03g1577 561 ProSiteProfiles C2 tensin-type domain profile. 321 448 IPR014020 -
Tan03g1577 561 MobiDBLite consensus disorder prediction 459 492 - -
Tan03g1577 561 SMART PTEN_C2_2 319 447 IPR014020 -
Tan03g1577 561 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 120 317 - -
Tan03g1577 561 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 122 528 IPR051281 GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)
Tan03g1577 561 MobiDBLite consensus disorder prediction 508 527 - -
Tan03g1577 561 Pfam Polymorphic toxin system, DSP-PTPase phosphatase 214 269 - -
Tan03g1577 561 ProSitePatterns Tyrosine specific protein phosphatases active site. 251 261 IPR016130 GO:0016311(InterPro)
Tan03g1577 561 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 143 309 IPR029021 -
Tan03g1577 561 MobiDBLite consensus disorder prediction 1 64 - -
Tan03g1577 561 CDD PTP_PTEN 145 308 IPR045101 GO:0016791(InterPro)
Tan03g1577 561 MobiDBLite consensus disorder prediction 1 57 - -
Tan03g1577 561 MobiDBLite consensus disorder prediction 454 527 - -
Tan03g1577 561 Pfam PTEN2, C2 domain 321 449 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1577 K01110 - - csv:101213277 982.245
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1575 Tan-Chr3:72002527 Tan03g1577 Tan-Chr3:72002527 0.00E+00 dispersed
Tan03g1577 Tan-Chr3:72002527 Tan03g1590 Tan-Chr3:72130673 0.00E+00 dispersed
Tan03g1576 Tan-Chr3:72002527 Tan03g1577 Tan-Chr3:72002527 0.00E+00 tandem
Tan03g1577 Tan-Chr3:72002527 Tan03g1578 Tan-Chr3:72002527 0.00E+00 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan03g1590 . 33 605 Protein tyrosine phosphatase (PTP) family AT3G50110 60.7 2.2e-188 656.4
Tan03g1575 . 33 457 Protein tyrosine phosphatase (PTP) family AT3G50110 72.1 3.3e-184 642.5
Tan03g1577 . 33 457 Protein tyrosine phosphatase (PTP) family AT3G50110 72.1 3.3e-184 642.5
Tan02g0941 . 19 610 Protein tyrosine phosphatase (PTP) family AT3G50110 57.1 5.9e-181 631.7
Tan03g1576 . 33 482 Protein tyrosine phosphatase (PTP) family AT3G50110 68.1 5.0e-180 628.6
Tan03g1578 . 33 482 Protein tyrosine phosphatase (PTP) family AT3G50110 68.1 5.0e-180 628.6
Tan02g1430 . 9 395 Protein tyrosine phosphatase (PTP) family AT5G39400 64.6 3.3e-148 522.3
Tan11g0955 . 1 854 Protein tyrosine phosphatase (PTP) family AT3G10550 68.6 0.0e+00 1168.3
Tan11g0955 . 1 854 Protein tyrosine phosphatase (PTP) family AT5G04540 66.0 0.0e+00 1114.8
Tan09g1556 . 1 1271 Protein tyrosine phosphatase (PTP) family AT5G58160 54.6 0.0e+00 1093.2
Tan01g3567 . 1 1386 Protein tyrosine phosphatase (PTP) family AT5G58160 50.8 5.5e-303 1038.1
Tan09g1557 . 2 1202 Protein tyrosine phosphatase (PTP) family AT5G58160 53.8 2.5e-287 986.1
Tan01g3002 . 87 393 Protein tyrosine phosphatase (PTP) family AT1G71860 66.1 1.2e-119 427.2
Tan01g3003 . 87 328 Protein tyrosine phosphatase (PTP) family AT1G71860 61.6 8.6e-86 314.7
Tan09g2433 . 13 904 Protein tyrosine phosphatase (PTP) family AT5G23720 64.8 4.3e-313 1071.2
Tan06g2562 . 33 172 Protein tyrosine phosphatase (PTP) family AT3G06110 57.1 2.9e-42 169.1
Tan06g2563 . 33 172 Protein tyrosine phosphatase (PTP) family AT3G06110 57.1 2.9e-42 169.1
Tan02g0125 . 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 76.9 3.5e-70 261.9
Tan02g0126 . 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 76.9 3.5e-70 261.9
Tan04g0664 . 96 376 Protein tyrosine phosphatase (PTP) family AT3G52180 70.5 8.7e-116 414.1
Tan04g1399 . 4 282 Protein tyrosine phosphatase (PTP) family AT3G10940 68.0 3.8e-111 398.7
Tan04g1400 . 4 282 Protein tyrosine phosphatase (PTP) family AT3G10940 68.0 3.8e-111 398.7
Tan07g1359 . 141 589 Protein tyrosine phosphatase (PTP) family AT3G01510 73.9 7.6e-207 717.2
Tan05g0689 . 9 210 Protein tyrosine phosphatase (PTP) family AT2G32960 59.9 2.6e-74 276.2
Tan05g0690 . 9 210 Protein tyrosine phosphatase (PTP) family AT2G32960 59.9 2.6e-74 276.2
Tan02g0134 . 1 241 Protein tyrosine phosphatase (PTP) family AT2G32960 56.0 6.3e-73 271.6
Tan02g0133 . 1 211 Protein tyrosine phosphatase (PTP) family AT2G32960 55.3 1.6e-71 266.9
Tan09g0602 . 14 170 Protein tyrosine phosphatase (PTP) family AT2G32960 50.8 2.8e-52 203.0
Tan05g0691 . 9 151 Protein tyrosine phosphatase (PTP) family AT2G32960 53.4 9.9e-42 167.9
Tan05g0692 . 9 151 Protein tyrosine phosphatase (PTP) family AT2G32960 53.4 9.9e-42 167.9
Tan01g2070 . 1 333 Protein tyrosine phosphatase (PTP) family AT2G35680 56.8 1.7e-102 370.2
Tan08g0099 . 12 263 Protein tyrosine phosphatase (PTP) family AT2G35680 54.0 1.2e-79 294.3
Tan08g0100 . 12 263 Protein tyrosine phosphatase (PTP) family AT2G35680 54.0 1.2e-79 294.3
Tan08g0101 . 12 263 Protein tyrosine phosphatase (PTP) family AT2G35680 54.0 1.2e-79 294.3
Tan08g0102 . 12 195 Protein tyrosine phosphatase (PTP) family AT2G35680 70.7 2.3e-75 280.0
Tan08g0102 . 27 198 Protein tyrosine phosphatase (PTP) family AT5G56610 52.9 2.2e-43 172.9
Tan01g2070 . 37 209 Protein tyrosine phosphatase (PTP) family AT5G56610 50.9 1.4e-42 170.2
Tan05g0689 . 43 211 Protein tyrosine phosphatase (PTP) family AT4G03960 78.1 1.5e-77 286.6
Tan05g0690 . 43 211 Protein tyrosine phosphatase (PTP) family AT4G03960 78.1 1.5e-77 286.6
Tan02g0133 . 42 211 Protein tyrosine phosphatase (PTP) family AT4G03960 75.9 1.8e-75 279.6
Tan02g0134 . 42 241 Protein tyrosine phosphatase (PTP) family AT4G03960 64.5 1.0e-70 263.8
Tan09g0602 . 12 183 Protein tyrosine phosphatase (PTP) family AT4G03960 57.0 2.7e-55 212.6
Tan05g0691 . 43 151 Protein tyrosine phosphatase (PTP) family AT4G03960 72.5 9.0e-43 171.0
Tan05g0692 . 43 151 Protein tyrosine phosphatase (PTP) family AT4G03960 72.5 9.0e-43 171.0
Tan09g0602 . 12 196 Protein tyrosine phosphatase (PTP) family AT3G02800 71.9 2.3e-78 289.3
Tan05g0689 . 40 206 Protein tyrosine phosphatase (PTP) family AT3G02800 61.1 1.5e-56 216.9
Tan05g0690 . 40 206 Protein tyrosine phosphatase (PTP) family AT3G02800 61.1 1.5e-56 216.9
Tan02g0133 . 47 200 Protein tyrosine phosphatase (PTP) family AT3G02800 61.0 8.0e-55 211.1
Tan02g0134 . 47 230 Protein tyrosine phosphatase (PTP) family AT3G02800 51.1 4.6e-50 195.3
Tan04g0328 . 1 188 Protein tyrosine phosphatase (PTP) family AT3G55270 65.6 1.4e-62 238.8
Tan04g0329 . 1 188 Protein tyrosine phosphatase (PTP) family AT3G55270 65.6 1.4e-62 238.8
Tan04g0330 . 1 188 Protein tyrosine phosphatase (PTP) family AT3G55270 65.6 1.4e-62 238.8
Tan04g0331 . 1 188 Protein tyrosine phosphatase (PTP) family AT3G55270 65.6 1.4e-62 238.8
Tan02g1430 . 9 395 Protein tyrosine phosphatase (PTP) family AT5G39400 64.6 3.3e-148 522.3
Tan02g0941 . 31 610 Protein tyrosine phosphatase (PTP) family AT3G19420 66.2 1.4e-219 760.0
Tan03g1590 . 31 605 Protein tyrosine phosphatase (PTP) family AT3G19420 62.7 2.6e-197 686.0
Tan03g1575 . 31 454 Protein tyrosine phosphatase (PTP) family AT3G19420 73.4 2.3e-190 662.9
Tan03g1577 . 31 454 Protein tyrosine phosphatase (PTP) family AT3G19420 73.4 2.3e-190 662.9
Tan03g1576 . 31 479 Protein tyrosine phosphatase (PTP) family AT3G19420 69.3 3.5e-186 649.0
Tan03g1578 . 31 479 Protein tyrosine phosphatase (PTP) family AT3G19420 69.3 3.5e-186 649.0
Tan03g1590 . 33 605 Protein tyrosine phosphatase (PTP) family AT3G50110 60.7 2.2e-188 656.4
Tan03g1575 . 33 457 Protein tyrosine phosphatase (PTP) family AT3G50110 72.1 3.3e-184 642.5
Tan03g1577 . 33 457 Protein tyrosine phosphatase (PTP) family AT3G50110 72.1 3.3e-184 642.5
Tan02g0941 . 19 610 Protein tyrosine phosphatase (PTP) family AT3G50110 57.1 5.9e-181 631.7
Tan03g1576 . 33 482 Protein tyrosine phosphatase (PTP) family AT3G50110 68.1 5.0e-180 628.6
Tan03g1578 . 33 482 Protein tyrosine phosphatase (PTP) family AT3G50110 68.1 5.0e-180 628.6
Tan09g1556 . 1 1271 Protein tyrosine phosphatase (PTP) family AT5G58160 54.6 0.0e+00 1093.2
Tan01g3567 . 1 1386 Protein tyrosine phosphatase (PTP) family AT5G58160 50.8 5.5e-303 1038.1
Tan09g1557 . 2 1202 Protein tyrosine phosphatase (PTP) family AT5G58160 53.8 2.5e-287 986.1
Tan11g0955 . 1 854 Protein tyrosine phosphatase (PTP) family AT3G10550 68.6 0.0e+00 1168.3
Tan11g0955 . 1 854 Protein tyrosine phosphatase (PTP) family AT5G04540 66.0 0.0e+00 1114.8
Tan05g0144 . 42 247 Protein tyrosine phosphatase (PTP) family AT3G44620 57.9 3.3e-69 259.2
Tan01g2161 . 22 318 Protein tyrosine phosphatase (PTP) family AT2G35320 63.3 1.2e-110 397.1
Tan03g0829 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0830 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0831 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0832 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0833 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0834 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0829 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0830 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0831 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0832 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0833 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0834 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0829 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0830 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0831 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0832 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0833 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0834 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001006 4 2 3 3 2 2 3 2 2 2 2 2 3 2 2 3 2 4 3 2 2 2 2 2 2 2 2 11 6 2 83