Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g1578 | ATGGATGATGGAACTTCTAATAGTTCAACACAATCTGCAGTCAACAATCCAGCTCCAACAGTCCATAGGCAAAATAGTAAAGGAGACCATTTGACATCTATTTTATCTACGTCTGGAATATCTTCTTGGGCTAAGAGTTTTAGAAATTCACAACCACCTGAAGCAGCAGAAAATGACTCTAAGGCAGGAAATGGTGGGATGTCAGCAATTGCTCGTTTCAGTAGTGGCTTTGGATTGCGGATACCTTCAATGTCTCCTGTACGAGATGATGGTGTTGCAGATACCAAATCAGCAACGCAATCTGGTGTTTTTGAATCATTCACGAAAGGTTTAGTTGACACATCTCAGAATGCAGTAAAGGCTATGCAGGTAAAGGCACGCCATATTGTCTCTCAGAACAAACGAAGATATCAGGAAGGAGAATTTGATTTGGATATGACATATATCACCGAAAATATAATTGCTATGGGGTTTCCTGCTGGTCACATGAGCTCTGGTTTATTTGGATTCCTTGAGGGATTTTACAGAAATCATATGGAAGAAGTGATCAGATTTTTTGAATCTCATCATAAGGGAAAATACAAAGTTTACAATCTTTGCTCAGAGCGTTTGTATGATGCCTCATTATTTGAGGGGAAGGTTGCACATTTCCCGTTTGATGATCATAATTGTCCTCCTATCCATCTCATAAAATCATTTTGTCAAAGTGCATATGCGTGGTTAAAGGAGGATATTGAGAATGTGGTTGTTGTTCATTGTAAAGCTGGTATGGCAAGAACAGGGCTAATGATTTGCAGCCTCCTTTTATTCCTAAAGTTTTTCCAATCATCAGCAGAGGCAATTGATTATTACAATCAGAAAAGATGCGTAGATGGAAAGGCTTTGGTTCTTCCTAGCCAGATTGTTAGCCATTCAGTTCCTTGTTTTGTGTGTGTGTGTGTTTTTAACTTTATTCTGATGCCTCTTTACTTGATACAGAGATATGTCAAATATTTTGAGCACATTTCAACACATTTCAACGGAAATACTCCACCTGGACGGAGGTGCATGCTGAGAGGTTTTCGGCTTCACAAGTGCCCGTATTGGGTTAGGCCTTCCATTACAATATCAAATCACAGTGAGATTTTGTTCTCAACAAAAAACCATCCAAAGACAAAGAATTTAATGCCAGAAGATTTCTGGATTAGGGCACCAAAGAAAGGATTTGTTGTCTTTGCACTGCCAGGGGAGCCTGGTTTGACAGAGTTATCTGGGGACTTCAAGATTCATTTTCATGACCGACATGGAGATTTTTATTGTTGGTTAAATACAACAATGACAGAAAACAAAGTATTATTAAGTGACACAGATCTTGATGGTTTTGATAAGAGAAAACTTCCTACCCCTGGATTCCAGGTCGAAGTAGTGATGATAGACTATAATGGTACTTTGCCAACACGATTGAAAACTGATTCTGATGGCAAAGGATCTGATCGTCGCTCCATTCATGATCGGGCATCAGATCATGAAGCCGCACAATCCAGCAAAAACAAAATTCCTGAGGGTGAAGAAAATGATGACGATGTATTCTCTGATAGTGATGAAGAAAATTGTGACACAAAAACCAGTCTAGCTCAATCAACTTCTGGAAATGCAAAAGCTGAACATTCATCAACAGCTATTGCTTCTGAAAAAATTGGGAGCTTAGCGCATGAAACTAATCATTTGTCACTCGGGAACAGGAAAACCTACAAATCAATGCTCCAAAGACTCAAACTTTGA | 1761 | 39.13 | MDDGTSNSSTQSAVNNPAPTVHRQNSKGDHLTSILSTSGISSWAKSFRNSQPPEAAENDSKAGNGGMSAIARFSSGFGLRIPSMSPVRDDGVADTKSATQSGVFESFTKGLVDTSQNAVKAMQVKARHIVSQNKRRYQEGEFDLDMTYITENIIAMGFPAGHMSSGLFGFLEGFYRNHMEEVIRFFESHHKGKYKVYNLCSERLYDASLFEGKVAHFPFDDHNCPPIHLIKSFCQSAYAWLKEDIENVVVVHCKAGMARTGLMICSLLLFLKFFQSSAEAIDYYNQKRCVDGKALVLPSQIVSHSVPCFVCVCVFNFILMPLYLIQRYVKYFEHISTHFNGNTPPGRRCMLRGFRLHKCPYWVRPSITISNHSEILFSTKNHPKTKNLMPEDFWIRAPKKGFVVFALPGEPGLTELSGDFKIHFHDRHGDFYCWLNTTMTENKVLLSDTDLDGFDKRKLPTPGFQVEVVMIDYNGTLPTRLKTDSDGKGSDRRSIHDRASDHEAAQSSKNKIPEGEENDDDVFSDSDEENCDTKTSLAQSTSGNAKAEHSSTAIASEKIGSLAHETNHLSLGNRKTYKSMLQRLKL | 586 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 72002527 | 72007906 | + | Tan0010329.4 | Tan03g1578 | 747082 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g1578 | 586 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 249 | 288 | IPR000387 | GO:0016311(InterPro) | |
Tan03g1578 | 586 | ProSiteProfiles | C2 tensin-type domain profile. | 346 | 473 | IPR014020 | - | |
Tan03g1578 | 586 | CDD | PTP_PTEN | 145 | 333 | IPR045101 | GO:0016791(InterPro) | |
Tan03g1578 | 586 | Pfam | PTEN2, C2 domain | 346 | 474 | - | - | |
Tan03g1578 | 586 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 135 | 339 | IPR029023 | - | |
Tan03g1578 | 586 | MobiDBLite | consensus disorder prediction | 479 | 552 | - | - | |
Tan03g1578 | 586 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 148 | 288 | IPR029021 | - | |
Tan03g1578 | 586 | Gene3D | Protein tyrosine phosphatase superfamily | 120 | 342 | IPR029021 | - | |
Tan03g1578 | 586 | FunFam | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 | 120 | 312 | - | - | |
Tan03g1578 | 586 | Pfam | Polymorphic toxin system, DSP-PTPase phosphatase | 214 | 269 | - | - | |
Tan03g1578 | 586 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 251 | 261 | IPR016130 | GO:0016311(InterPro) | |
Tan03g1578 | 586 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
Tan03g1578 | 586 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 122 | 301 | IPR051281 | GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER) | |
Tan03g1578 | 586 | MobiDBLite | consensus disorder prediction | 484 | 517 | - | - | |
Tan03g1578 | 586 | MobiDBLite | consensus disorder prediction | 533 | 552 | - | - | |
Tan03g1578 | 586 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Tan03g1578 | 586 | SMART | PTEN_C2_2 | 344 | 472 | IPR014020 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1576 | Tan-Chr3:72002527 | Tan03g1578 | Tan-Chr3:72002527 | 0.00E+00 | dispersed | |
Tan03g1578 | Tan-Chr3:72002527 | Tan03g1590 | Tan-Chr3:72130673 | 0.00E+00 | dispersed | |
Tan03g1577 | Tan-Chr3:72002527 | Tan03g1578 | Tan-Chr3:72002527 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g1578 | K01110 | - | csv:101213277 | 968.378 |