Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1585 ATGGCCGTGGAGCTCATGCCCGAGGCCTACTACCCACTCTCCTCCACCGCCCAAAACATGGAAGCCAACGCCGTCCAAGAAGCCGCCTCCGGCCTCGAAAGCGTCGAGAAGCTCATCCGATTGCTTTCCAATGCTCACCAACACCACTCCTTACCCTCTATTCAATCCCCAATTCCAAATCCAAATCCAAATCCTTCCAATTCCAATTCCAATTCTAATTCCGCCCTCGATTTCCCCACCGACTGTCGCGCCGCCGCCGATGCCGCCGTCTCCAAGTTCAAGAAGGTCATTTCTCTTCTGGGCCGTAGCCGGGTCGGCCACGCCCGCTTCCGGAGAGCTCCTCTCCCTCAAAGCCCCCAAGTCCACTACGCCACTCCCATCCAGCAGATCCCTCCTCAGCCTCAACTTCCCCTCCCCGACGGCGACCTTCATAAGAAAGAGCCTCTCACTACCAGTGTCAATTTCTCTTATTCCTCCGCTCATAACTCCTTCATCTCCTCCTTGACCGGCGATGGAGACAGCAAGCAGCCCTCCTCCTCCTCGCCCTTTCAGATTACCAACCTCTCCCAGGTCTCCTCCGCCGGAAAACCCCCCCTCTCTACTTCCTCCCTCAAGAGGAAGTGTAGCTCCGACAACTTGGGATCGGGCAAGTGCGGCGCTGCTTCTTCCTCCGGCCGATGTCACTGTTCCAAGAAAAGAAAACTGAGGGTGAAGAGAGTCGTGAGGGTTCCGGCGATAAGCTTGAAAATGGCGGACATCCCACCGGACGATTATTCATGGAGAAAATATGGTCAAAAGCCCATTAAAGGCTCCCCACATCCCAGGGGATATTACAAGTGTAGCAGCGTCAGAGGTTGCCCAGCCCGGAAACACGTAGAACGGGCCGTAGACGATCCGGCGATGTTAGTGGTCACTTACGAAGGAGAACACAATCACACCCTCACCGTACCCGAAACCTCCAATCTCATCCTCGAGTCCTCGTAG 984 55.69 MAVELMPEAYYPLSSTAQNMEANAVQEAASGLESVEKLIRLLSNAHQHHSLPSIQSPIPNPNPNPSNSNSNSNSALDFPTDCRAAADAAVSKFKKVISLLGRSRVGHARFRRAPLPQSPQVHYATPIQQIPPQPQLPLPDGDLHKKEPLTTSVNFSYSSAHNSFISSLTGDGDSKQPSSSSPFQITNLSQVSSAGKPPLSTSSLKRKCSSDNLGSGKCGAASSSGRCHCSKKRKLRVKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPAMLVVTYEGEHNHTLTVPETSNLILESS 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 72085689 72087214 - Tan0010560.1 Tan03g1585 747089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1585 327 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 25 318 IPR044810 GO:0003700(InterPro)
Tan03g1585 327 MobiDBLite consensus disorder prediction 125 147 - -
Tan03g1585 327 SMART WRKY_cls 254 314 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g1585 327 MobiDBLite consensus disorder prediction 168 219 - -
Tan03g1585 327 Pfam WRKY DNA -binding domain 256 312 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g1585 327 MobiDBLite consensus disorder prediction 168 226 - -
Tan03g1585 327 ProSiteProfiles WRKY domain profile. 249 315 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g1585 327 MobiDBLite consensus disorder prediction 49 76 - -
Tan03g1585 327 Pfam Plant zinc cluster domain 205 252 IPR018872 -
Tan03g1585 327 SUPERFAMILY WRKY DNA-binding domain 251 313 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g1585 327 Gene3D WRKY domain 238 315 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g1585 327 FunFam WRKY transcription factor 65 238 315 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4742 Tan-Chr1:113264247 Tan03g1585 Tan-Chr3:72085689 3.40E-78 dispersed
Tan01g4743 Tan-Chr1:113264247 Tan03g1585 Tan-Chr3:72085689 4.80E-33 dispersed
Tan03g1570 Tan-Chr3:71954948 Tan03g1585 Tan-Chr3:72085689 2.30E-120 dispersed
Tan03g1585 Tan-Chr3:72085689 Tan05g1564 Tan-Chr5:34512686 6.60E-59 dispersed
Tan09g1752 Tan-Chr9:69067801 Tan03g1585 Tan-Chr3:72085689 5.50E-54 transposed
Tan03g1585 Tan-Chr3:72085689 Tan05g1563 Tan-Chr5:34512686 2.20E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26999 PF03106 WRKY 4.30E-26 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1585 - - - 0.0