Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1590 ATGGATAATGGAACTTCTAATAGTTCAACACAATCTGCAGTCAACAATCCAGCTCCAACAGTTCATAGGCAAAATAGTAAAGGAGACCATTTGACATCTATTTTATCTACGTCTGGAATATCTTCTTGGGCTAAGAGTTTTAGAAATTCACAACCACCTGAAGCAGCAGAAAATGACTCTAAGGCAGGAAATGGTGGGATGTCAGCAATTGCTCGTTTCAGTAGTGGCTTTGGATTGGGGATACCTTCAATGTCTCCTGTACGAGATGATGGTGTTGCAGATACCAAATCAGCAACGCAATCTGGCATTTTCGAATCATTCACGAAAGGTTTAGTTGACACATCTCAGAATGCAGTAAAGGCTATGCAGGTAAAGGCACGCCATATTGTCTCTCAGAACAAACGAAGATATCAGGAAGGAGAATTTGATTTGGATATGACATATATCACCGAAAATATAATTGCTATGGGGTTTCCTGCTGGTCACATGAGCTCTGGTTTATTTGGATTCCTTGAGGGATTTTACAGAAATCATATGGAAGAAGTGATCAAATTTTTTGAATCTCATCATAAGGGAAAATACAAAGTTTACAATCTTTGCTCAGAGCGTTTGTATGATGCCTCATTATTTGAGGGGAAGGTTGCACATTTCCCGTTTGATGATCATAATTGTCCTCCTATCCATCTCATAAAATCATTTTGTCAAAGTGCATATGCGTGGTTAAAGGAGGATATTGAGAATGTGGTTGTTGTTCATTGTAAAGCTGGTATGGCAAGAACAGGGCTAATGATTTGCAGCCTCCTTTTATTCCTAAAGTTTTTCCAATCATCAGCAGAGGCAATTGATTATTACAATCAGAAAAGATGTGTAGATGGAAAGGCTTTGGTTCTTCCTAGCCAGATTAGATACGTCAAATATTTTGAGCGCATTTCAACACATTTCAACGGAAATACTCCACCTGGACGGAGGTGCATGCTGAGAGGTTTTCGGCTTCACAAGTGCCCGTATTGGGTTAGGCCTTCCATTACAATATCAAATCACAGTGAGATTTTGTTCTCAACAAAAAACCATCCAAAGACAAAGAATTTAATGCCAGAAGATTTCTGGATTAGGGCACCAAAGAAAGGATTTGTTGTCTTTGCACTGCCAGGTGAGCCTGGTTTGACAGAGTTATCTGGGGACTTCAAGATTCATTTTCATGACCGACATGGAGATTTTTATTGTTGGTTAAATACAACAATGACAGAAAACAAAGTATTATTAAGTGACACAGATCTTGATGGTTTTGATAAGAGAAAACTTCCTACCCCTGGATTCCAGGTCGAAGTTGTGATGATAGACTATAATGGTACTTTGCCAACACGATTGAAAACTGATTCTGCTGGCAAAGGATCTGATCGTCGCTCCATTCATGATCGGGCATCAGATCATGAAGCCGCACAATCCAGCAAAAACAAAATTCCCGAGGGTGAAGAAAATGATGACGATGTATTCTCTGATAGTGATGAAGAAAATTGTGACACAAAAACCAGTCTAGCTCAATCAACTTCTGGAAATGCAAAAGCTGAACATTCATCAACAGCTATTGCTTCTGAAAAAGTTGGGAGCTTAGCGCATGAAACTAATCATTTGTCACTCGGGAACGAGAAAAACCTACAAATCAATGCTCCAAAAGACTCAAACTTTGATGGCATGATACAACCGTCAGGCCTTGAGACCCCAAATTTCGACTCAGCAAGGGCAAGCGCTTTCAAGGCAATAGCCGCTGATGCGTCAGTTTTCACTTTTGGGGATGAAGAAGACTTTGATAGTGAATGA 1818 39.88 MDNGTSNSSTQSAVNNPAPTVHRQNSKGDHLTSILSTSGISSWAKSFRNSQPPEAAENDSKAGNGGMSAIARFSSGFGLGIPSMSPVRDDGVADTKSATQSGIFESFTKGLVDTSQNAVKAMQVKARHIVSQNKRRYQEGEFDLDMTYITENIIAMGFPAGHMSSGLFGFLEGFYRNHMEEVIKFFESHHKGKYKVYNLCSERLYDASLFEGKVAHFPFDDHNCPPIHLIKSFCQSAYAWLKEDIENVVVVHCKAGMARTGLMICSLLLFLKFFQSSAEAIDYYNQKRCVDGKALVLPSQIRYVKYFERISTHFNGNTPPGRRCMLRGFRLHKCPYWVRPSITISNHSEILFSTKNHPKTKNLMPEDFWIRAPKKGFVVFALPGEPGLTELSGDFKIHFHDRHGDFYCWLNTTMTENKVLLSDTDLDGFDKRKLPTPGFQVEVVMIDYNGTLPTRLKTDSAGKGSDRRSIHDRASDHEAAQSSKNKIPEGEENDDDVFSDSDEENCDTKTSLAQSTSGNAKAEHSSTAIASEKVGSLAHETNHLSLGNEKNLQINAPKDSNFDGMIQPSGLETPNFDSARASAFKAIAADASVFTFGDEEDFDSE 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 72130673 72134570 + Tan0016659.1 Tan03g1590 747094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1590 605 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 249 288 IPR000387 GO:0016311(InterPro)
Tan03g1590 605 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 120 317 - -
Tan03g1590 605 ProSiteProfiles Phosphatase tensin-type domain profile. 135 314 IPR029023 -
Tan03g1590 605 Gene3D Protein tyrosine phosphatase superfamily 120 317 IPR029021 -
Tan03g1590 605 ProSiteProfiles C2 tensin-type domain profile. 321 448 IPR014020 -
Tan03g1590 605 MobiDBLite consensus disorder prediction 1 34 - -
Tan03g1590 605 Pfam Polymorphic toxin system, DSP-PTPase phosphatase 214 269 - -
Tan03g1590 605 Pfam PTEN2, C2 domain 321 449 - -
Tan03g1590 605 SMART PTEN_C2_2 319 447 IPR014020 -
Tan03g1590 605 MobiDBLite consensus disorder prediction 508 532 - -
Tan03g1590 605 CDD PTP_PTEN 145 310 IPR045101 GO:0016791(InterPro)
Tan03g1590 605 ProSitePatterns Tyrosine specific protein phosphatases active site. 251 261 IPR016130 GO:0016311(InterPro)
Tan03g1590 605 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 122 530 IPR051281 GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)
Tan03g1590 605 MobiDBLite consensus disorder prediction 460 492 - -
Tan03g1590 605 MobiDBLite consensus disorder prediction 454 534 - -
Tan03g1590 605 MobiDBLite consensus disorder prediction 44 63 - -
Tan03g1590 605 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 143 310 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0941 Tan-Chr2:11624401 Tan03g1590 Tan-Chr3:72130673 7.90E-199 dispersed
Tan02g1430 Tan-Chr2:54750054 Tan03g1590 Tan-Chr3:72130673 1.70E-35 dispersed
Tan03g1577 Tan-Chr3:72002527 Tan03g1590 Tan-Chr3:72130673 0.00E+00 dispersed
Tan03g1578 Tan-Chr3:72002527 Tan03g1590 Tan-Chr3:72130673 0.00E+00 dispersed
Tan03g1590 Tan-Chr3:72130673 Tan03g1575 Tan-Chr3:72002527 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1590 K01110 - csv:101213277 1053.51