Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1600 ATGGAAAATCTTCTCTCTCACCTTCTCCTCTGTCTCCTTCTGTTCTCTGTTCAGGTCCTCTCTCTGCTATCCAGTCCTCCAGTTAAGTATTTTGTCAACTGTGGATCACGGACCACCATCGTCGATGACACTGGCCGGAATTTCATCGGCGACTTGGATACCAGCGTTACCTTCGGCTTCAGGTTCACTTCAGGAACTTCCCGCGCACTCGAGACGGACACTTCATCTCTTTACGATTCCGTAAGGATTTTCAATCAGCCAGCGTTTTACGAATTTGCAATCGACCAAGATGCTGTTCATATTGTACGCATTCGTTTCTCCCCGTTCAATTTTCGCACCGATTTATCGACAGCCCTTTTCAATGTTTCGGCTACTGGGTTCTCTCTTCTAAAAAATGTCACCGCCACCAACATCATCGGTAACGATCTTGCTTCAATTAAGGAATTCTTCTTGAAATTAAAACCAGGAAAACTTCGGATTAATTTTTTACCCAAATCTTCATCTATTGCGTATGTAAATGCCATTGAAGTGTTCCCCACCCCACCAAACTTCATCTCGTCGGAGGCTCTGCCACTTATCTCAGATGGAAGAAACGACGGTATGCCTGAGGTCTTACCTTCTCCAATTTTACATACAATTTACAGAGTCAATGTCGGAGGTCCTGAAATTACCCCCAACGGTGACAGACTGTGGAGGAAATGGGAACAGGACCACGCTTATCTGCTGAATCCGAGCTCCGCAAAGAACAGCGACCTCTATGCCACAAGTCCCAGTTATGAGAACGAAGATGACGATTATTTTGCACCCGAGTTGGTATACAGAACGGCCAAGGAGATGAACAATACAACTTCCAGCTCCCCGATTCGGTGGTCTTTTCCTTCGAGAAAACATGCTCGCCATCTTCTCCGTGTTCATTTCTGTGATATAATCGGTAAGTCCTTTGACAATTTTCTCGTCTTCAATTTGTTTATTGGTGATAGGTTCAGTCAGAAAATCAATCCTGGAGGGGGGGCTGTTCCATTTCATTATGATTTCTTGGTGGATTCCGGTGAAAGTGGGCTTGTTAACGTCGGTGTTGGACCTCTGGGTACAAATGAATCTGTACAGTTCAATGCTTATTTAAATGGGGTTGAGATTATGGAAGTCTTGGATGAACATAGCAAAGATCCTGACATCATTGACCCTGAGGAAACGAAGAAGAAGAAGAAGAAGAAGAAGAAATATGTGGGTGTGGGTTTGCCTGTTGGGAGTTTTGGTTTGTTTTGCATTTTAGGTTGTATGATCTGGTTTGGTTGGAAATGGAGGAGGCCAAAAACGGCAAGCAGCTCTCCCATCCTTAACTTGAATCTTGAGCTGAAACTTTCTCTTGCTGAAATCAAAACCGTCACAAATAATTTCAACCAGAAATTCATTGTTGGCGAGGGTGGTTTTGGGAAAGTCTACAAGGGAATTATGAGCAACGGCATGAAAGTAGCTGTGAAGCGAAGTCAGCCCGGGCATGGACAAGGTATTTCTGAGTTCGAGAGAGAAATCACGACCTTGTCGCGAATTTGCCATCGACACCTCGTTTCGTTTATAGGGTATTGCAATGAGGAACTCGAGATGATTTTGGTTTATGAATTCATGGAGAATGGAACTTTGAGGGAGCACCTTTACAACTCAAAGCTCCCTCCTTTGAATTGGAAGAAAAGACTTGAAATCTGCATTGGTGCAGCTAGAGGCTTGCATTACCTACACAAAGGCTCAACTACAGGAATCATTCACCGTGATGTCAAATCAACAAATATTTTGCTTGATGAGAACCTTGTTGCTAAAGTTTCTGACTTTGGTCTTTCAAGAGCAGGGTCACTGGATGAAACTCATGTCAGCACAGATATTAAAGGGACTTTCGGATATCTTGATCCTGAGTATTTTCGAACCCAACAATTGACAGAGAAATCCGATGTCTACTCATTTGGAGTACTTCTTTTGGAGGTTTTATGTGCAAGACTAGCTTTAGATCCAACACTTCCAAGAGAGCAAATAAATCTAGCAGAATGGGGATTAAGGTGCAAGAAAATGGAGTTGTTTGAAGAGATCATTGATCCAAAATTGAAGGGTGAAATTGATCCCAACTCCTTGAGAAAGTTCAGTGATACAATAGAAAAGTGCTTAGAAGATAATGCTACTAATAGGCCTACAATGGCAGATGTGGTATGGGACTTGGAGTATGCATTGCAACTTCAACAAAGTGCACCCTCGAGAATGCCCCATAAGGACAGTGAAACCTCTTCAACAATCACTCAACGTATTGTTTTTATTGATTCTTCCATTCTAAGGGATCGTCAAGATCTAAATACTCACTTAACCGCTACTGAAGTTTTCTCTCAGATGAAGGCAACTGATGGCAGATAA 2394 42.77 MENLLSHLLLCLLLFSVQVLSLLSSPPVKYFVNCGSRTTIVDDTGRNFIGDLDTSVTFGFRFTSGTSRALETDTSSLYDSVRIFNQPAFYEFAIDQDAVHIVRIRFSPFNFRTDLSTALFNVSATGFSLLKNVTATNIIGNDLASIKEFFLKLKPGKLRINFLPKSSSIAYVNAIEVFPTPPNFISSEALPLISDGRNDGMPEVLPSPILHTIYRVNVGGPEITPNGDRLWRKWEQDHAYLLNPSSAKNSDLYATSPSYENEDDDYFAPELVYRTAKEMNNTTSSSPIRWSFPSRKHARHLLRVHFCDIIGKSFDNFLVFNLFIGDRFSQKINPGGGAVPFHYDFLVDSGESGLVNVGVGPLGTNESVQFNAYLNGVEIMEVLDEHSKDPDIIDPEETKKKKKKKKKYVGVGLPVGSFGLFCILGCMIWFGWKWRRPKTASSSPILNLNLELKLSLAEIKTVTNNFNQKFIVGEGGFGKVYKGIMSNGMKVAVKRSQPGHGQGISEFEREITTLSRICHRHLVSFIGYCNEELEMILVYEFMENGTLREHLYNSKLPPLNWKKRLEICIGAARGLHYLHKGSTTGIIHRDVKSTNILLDENLVAKVSDFGLSRAGSLDETHVSTDIKGTFGYLDPEYFRTQQLTEKSDVYSFGVLLLEVLCARLALDPTLPREQINLAEWGLRCKKMELFEEIIDPKLKGEIDPNSLRKFSDTIEKCLEDNATNRPTMADVVWDLEYALQLQQSAPSRMPHKDSETSSTITQRIVFIDSSILRDRQDLNTHLTATEVFSQMKATDGR 797
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 72240893 72243768 - Tan0021574.1 Tan03g1600 747104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1600 797 ProSitePatterns Protein kinases ATP-binding region signature. 472 494 IPR017441 GO:0005524(InterPro)
Tan03g1600 797 FunFam receptor-like protein kinase FERONIA 434 541 - -
Tan03g1600 797 Gene3D Transferase(Phosphotransferase) domain 1 542 762 - -
Tan03g1600 797 Pfam Malectin-like domain 32 382 IPR024788 -
Tan03g1600 797 SMART serkin_6 466 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1600 797 FunFam Receptor-like protein kinase FERONIA 542 757 - -
Tan03g1600 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1600 797 Pfam Protein tyrosine and serine/threonine kinase 471 734 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1600 797 ProSiteProfiles Protein kinase domain profile. 466 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1600 797 Gene3D - 210 384 - -
Tan03g1600 797 Gene3D - 27 180 - -
Tan03g1600 797 PANTHER OS07G0166700 PROTEIN 452 742 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Tan03g1600 797 Gene3D Phosphorylase Kinase; domain 1 432 541 - -
Tan03g1600 797 SUPERFAMILY Protein kinase-like (PK-like) 454 735 IPR011009 -
Tan03g1600 797 CDD STKc_IRAK 472 736 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1600 Tan-Chr3:72240893 Tan04g0002 Tan-Chr4:110126 0.00E+00 dispersed
Tan03g1600 Tan-Chr3:72240893 Tan03g1602 Tan-Chr3:72263489 0.00E+00 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67337 PF12819 Malectin_like 8.80E-26 CL0202 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1600 - - - 0.0