Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan03g1601 | ATGGCAGATTACTCTTTGCTTTACCTTTTTCTCTCTCTAATCTCTCTCCTCTTCGCTTTCAAGCTCCGCCGTCGCAGAAACTTACCTCCCAGTCCGCCGTCTCTTCCCATCATCGGCCACCTCCATTATTTGAAAATCCCCGTCCACCGAACTTTCCAGAAGCTCTCTGCAAAATACGGACCAGTGATCTCTCTCTGGTTCGGATCTCGCCTCGTCGTGGTCGTCTCCTCCTCGGCCGTGGTGGAGGAGTGCTTCACTAAGAACGACGTCGTTCTGGCGAACCGTCCTCGGTTGCTACTCGGCAAACACATCGGCTACAACCACACTACGATGGTGGCGTCACCGTACGGCGACCACTGGCGGAACCTGCGGCGAATCGGCGCGATCGAGATCTTTTCGGCGTCTCGGCTGAACAAATTCGCCGGAATCAGGAGGGACGAAGTGGAGCGGTTACTGAGGAAGCTTTCGAGGAATAATTCGGTCCATGGATTTTCGAAGGTCCATATGCAATCGGCGATTTCGGAACTGACGTTCAACATATCGATGAGAATGGCGGCCGGAAAGAGGTATTTCGGTGAGGACGTGACGGACGAGGAGGAGGCGAAGCAGTTCAGAGAGTTGATTAAACAGATTGTGGCGTTGGGAGGAGTATCGAATCCGGGAGATTTCATTCCGATGCTGAACTGGATTCCGAACGGCTACGAGAGGAAGGTTTCGAGGCTTGCGAAGAGGATGGACGCATTCTTGCAGGGACTGATCGACGAACATCGGAGCAACAAGGAAGAAGGAAGGAACACGATGATCGATCACTTGCTATCTCTGCAAGAATCGGAGCCTGCGTACTATGGAGATCAAATAATCAAAGGAATTATTCTGGTGTTACTATTAGCAGGAACCGACACATCAGCTGTAACAATTGAATGGGCACTATCTCACTTACTGAACAATCCCGGAGTACTAAAAAAGGCAAGAGAAGAGCTGGACAATGAAATAGGCCAAGAACGACTAGTAGAAGAATCAGACGTACCCAAATTACCCTATCTTCAAGGAATAATCTCCGAGACTCTGCGGCTGAACCCAGCTGCTCCAATGCTAGTGCCGCATCTCACTTCAGACGATTGCACAATAAGCGGGTACGAAATACCACGTAACACAATCGTATTGGTTAATGCATGGGCCATCCATAGAGATCCTAACCAATGGGAAGAGCCCACGCGATTCAAACCAGAAAGACATGCAAATTCAGAAGGTGAAGTTCGAAGGTTGGTTCCTTTTGGAGTTGGACGACGAGCCTGCCCGGGGTCGGGCATGGCGCAGCGGGTGGTGGGCTTGGCTCTTGCCGCGCTGATTCAGTCCTACGAGTGGGACAGGATCGGCCAAGAGGAGGTGGACATGGCCGAGGGAAGAGGCGTCACCATGCCTAAGGTTGTCCCACTGGAAGCCATGTGCAAACCTCGTCCTATCATCCACAACCTTTTAATTTAA | 1485 | 51.25 | MADYSLLYLFLSLISLLFAFKLRRRRNLPPSPPSLPIIGHLHYLKIPVHRTFQKLSAKYGPVISLWFGSRLVVVVSSSAVVEECFTKNDVVLANRPRLLLGKHIGYNHTTMVASPYGDHWRNLRRIGAIEIFSASRLNKFAGIRRDEVERLLRKLSRNNSVHGFSKVHMQSAISELTFNISMRMAAGKRYFGEDVTDEEEAKQFRELIKQIVALGGVSNPGDFIPMLNWIPNGYERKVSRLAKRMDAFLQGLIDEHRSNKEEGRNTMIDHLLSLQESEPAYYGDQIIKGIILVLLLAGTDTSAVTIEWALSHLLNNPGVLKKAREELDNEIGQERLVEESDVPKLPYLQGIISETLRLNPAAPMLVPHLTSDDCTISGYEIPRNTIVLVNAWAIHRDPNQWEEPTRFKPERHANSEGEVRRLVPFGVGRRACPGSGMAQRVVGLALAALIQSYEWDRIGQEEVDMAEGRGVTMPKVVPLEAMCKPRPIIHNLLI | 494 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 72245494 | 72250420 | - | Tan0022758.1 | Tan03g1601 | 747105 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan03g1601 | 494 | PRINTS | P450 superfamily signature | 432 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PRINTS | P450 superfamily signature | 297 | 314 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PRINTS | P450 superfamily signature | 423 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PRINTS | P450 superfamily signature | 350 | 361 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PANTHER | CYTOCHROME P450 82C3-RELATED | 14 | 486 | IPR050651 | - | |
| Tan03g1601 | 494 | SUPERFAMILY | Cytochrome P450 | 29 | 486 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | CDD | CYP81 | 60 | 479 | - | - | |
| Tan03g1601 | 494 | FunFam | Cytochrome P450 family protein | 20 | 489 | - | - | |
| Tan03g1601 | 494 | Pfam | Cytochrome P450 | 29 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | Gene3D | Cytochrome P450 | 18 | 482 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PRINTS | E-class P450 group I signature | 306 | 332 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PRINTS | E-class P450 group I signature | 390 | 414 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PRINTS | E-class P450 group I signature | 80 | 101 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PRINTS | E-class P450 group I signature | 349 | 367 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PRINTS | E-class P450 group I signature | 56 | 75 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PRINTS | E-class P450 group I signature | 432 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PRINTS | E-class P450 group I signature | 286 | 303 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PRINTS | E-class P450 group I signature | 176 | 194 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | PRINTS | E-class P450 group I signature | 422 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1601 | 494 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 425 | 434 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g4719 | Tan-Chr1:113052083 | Tan03g1601 | Tan-Chr3:72245494 | 5.10E-141 | dispersed | |
| Tan01g4725 | Tan-Chr1:113107501 | Tan03g1601 | Tan-Chr3:72245494 | 6.60E-146 | dispersed | |
| Tan03g1601 | Tan-Chr3:72245494 | Tan05g1591 | Tan-Chr5:38367440 | 1.00E-175 | dispersed | |
| Tan03g1601 | Tan-Chr3:72245494 | Tan03g1603 | Tan-Chr3:72272251 | 1.00E-204 | proximal | |
| Tan01g4718 | Tan-Chr1:113047462 | Tan03g1601 | Tan-Chr3:72245494 | 1.90E-137 | wgd | |
| Tan03g1601 | Tan-Chr3:72245494 | Tan05g1578 | Tan-Chr5:36876420 | 3.30E-86 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan03g1601 | K13260 | - | csv:101211829 | 828.935 |