Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1646 ATGGGTCGCTTCAATCTCCTTATTGCATTCTCCCTTCTTTCTCTCTTCTTCTTCCCTTCCCCCACGCTTGCCCAACTTCGACAAAACTTCTACGCCAACATCTGTCCAAATGTCGAAACCATTGTCCGCAACGAAGTTACTAAAAAATTTCAGCAAACTTTCGTCACTGTTCCGGCCACTCTCCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGCCTCAGTCATTATTGCTTCCACCGCATCGAACAAGGCCGAGAAGGATCATCCCGATAACCTCTCGTTGGCCGGAGATGGATTTGACACCGTCATCAAGGCTAAAGCCGCCCTTGATGCCATCCCTCAATGCCGAAACAGAGTCTCCTGTGCGGATATTCTCACTTTGGCCACTCGGGACGTCATCGCACTGTCCGGCGGACCGTCGTACGCGGTGGAGCTGGGAAGATTAGACGGGCTGGTTTCTAGAGCCTCCGACGTGGACGGGAGACTCCCAGGGCCGACCTTTAATCTCAATCAGCTCAATTCTCTGTTTGCTGCTAATGGCCTTACGCAACAGGACATGATCGCTCTCTCAGCGGCTCACACCGTCGGATTTTCGCACTGCGGGAAGTTCGCGAACCGAATTTACAGCTTTGCCCCGGGGAATCCAGTGGACCCGTCACTAAACAAAACGTATGCAACCCAGCTACAACAGATGTGCCCGAAGAACGTGGACCCCAGAGTGGCGATCAACATGGACCCAATCACGCCCAGAGCATTTGACAACATATACTTTAAAAATCTCCAGCAGGGAATGGGCCTTTTCACCTCGGACCAGGTTCTGTTCACCGACGCTAGGTCCAGGCCCACAGTGAACGCGTGGGCCGGCAATTCCCAGGCCTTTAATAGGGCCTTTATTGAAGCCATGACCAAATTGGGCCGGGTCGGCGTCAAGACCGGTAGAAACGGGAACATTCGACGCGATTGTGGAGCTTTCAATTGA 987 52.58 MGRFNLLIAFSLLSLFFFPSPTLAQLRQNFYANICPNVETIVRNEVTKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASTASNKAEKDHPDNLSLAGDGFDTVIKAKAALDAIPQCRNRVSCADILTLATRDVIALSGGPSYAVELGRLDGLVSRASDVDGRLPGPTFNLNQLNSLFAANGLTQQDMIALSAAHTVGFSHCGKFANRIYSFAPGNPVDPSLNKTYATQLQQMCPKNVDPRVAINMDPITPRAFDNIYFKNLQQGMGLFTSDQVLFTDARSRPTVNAWAGNSQAFNRAFIEAMTKLGRVGVKTGRNGNIRRDCGAFN 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 72558800 72560756 + Tan0009288.1 Tan03g1646 747150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1646 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Tan03g1646 328 Pfam Peroxidase 42 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 FunFam Peroxidase 29 173 - -
Tan03g1646 328 PANTHER - 13 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 FunFam Peroxidase 166 307 - -
Tan03g1646 328 Gene3D - 29 328 - -
Tan03g1646 328 CDD secretory_peroxidase 25 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan03g1646 328 SUPERFAMILY Heme-dependent peroxidases 25 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 ProSiteProfiles Plant heme peroxidase family profile. 25 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1646 328 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
Tan03g1646 328 Gene3D Peroxidase, domain 2 166 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3732 Tan-Chr1:102087098 Tan03g1646 Tan-Chr3:72558800 1.10E-111 dispersed
Tan03g1646 Tan-Chr3:72558800 Tan05g1654 Tan-Chr5:45181190 5.10E-144 dispersed
Tan11g0586 Tan-Chr11:5212357 Tan03g1646 Tan-Chr3:72558800 3.20E-45 dispersed
Tan03g1646 Tan-Chr3:72558800 Tan05g2038 Tan-Chr5:70579068 3.30E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1646 K00430 - csv:101206860 600.897