Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1648 ATGATGCAATTCAGCGAGATTCCCCCACGGTTGCACCAAACGACGACCACTACCATTTCTTCTTCTTCTCCTTCTTCTTCTTCATTTTCAGAGATGTCCATGAATAATAAAAACCAAATTACGATGGGGCAGTTTCGAAGGCGCCCATGGCCTGGATTATTCCCTTGTTCGTCCAAGGCTCTTGGGAGTTGCTTGGGCGACGCCAATTGCATGGAACAGTTATTGGTTCACTGTGCCAACGCCATTGAATCCAACGACGCCACTCTCGCCCAACAAATCCTTTGGGTTCTCAACAACATTGCCCCTCCCGATGGCGACTCCAACCAACGCCTTACCTCCGCTTTCTTACGCGCTCTCGTCACACGCGCTGCCAACACCGGCAGCTGTAAGATCCTCGCCGCCATCACCACCGCCTCCTCCTCCTCCTCCCTCACTACCCACAACTTCTCCCTCATGGACCTCGCCTCCTTCGTCGATTTAACCCCCTGGCACCGCTTTGGCTTCACCGCCGCCAATGCCGCCATTCTAGACGCACTCGATGGCTACTCCGCCGTCCACGTCGTCGATTTCAGCCTAATGCATTGCATGCAAATCCCAACTCTCATCGACGCCATTGCTACTCGGTTCGAGGTCCCCCCTCTACTCAAACTCACCACCGTAGTCGTCGCCGTAAAAGACGCCCCGCCGTTGCTCGACCTGTCGTACGACGAATTAGGTGCGAAATTGGTGAATTTCGCCAGGTCAAAAAACGTGAGTATGGAATTTAGAGTGGTCCCGTCTTGCTACTCAGACGGTTTCGCGAATTTAATCGAACAAATCCGAGTGCAACACTTAATTTACGGACCCGAAAATAACGAAGCGCTGGTTTTAAACTGTCACATGATGCTCCATTACATCCCTGACGAAACATTTGACCAAAACCCAAACCCATCTCCCAATTTCGACATGTCGTCGTCTTCAATTCGATCCATGTTTCTCACAGCAATCCGTAGCTTAGACCCAACGATTGTGATTGTAGTCGACGAGGACGCCGATTTCACGTCGAGTAAATTAGTGAGCCGATTGAGATCGGCGTTCAATTACCTCTGGATTCCGTACGACTCTATGGATTCATTTCTTCCGAGGAGCAGCAAGCAGAGGGAGTGGTACGAGGCCGATATTTGTTGGAAGATTGAGAATGTGATAGCTCACGAAGGGATTCAGAGAGTTGAAAGATTAGAGCCGAAGGGGCGGTGGGTTCAACGAATGCTAAACTCCAAATTCCGAGGAGTTCCGTTCGGAGACGACGCCGTTTCGGAGGTGAAGACGATGCTCGACGAGCATGCTGCGGGATGGGGCTTCAAGAAAGAAGACGACCACCTCCTCCTCACGTGGAAAGGCCACGACGTCGTTTTCGCCACCGCTTGGGTACCTTGCTAA 1419 51.59 MMQFSEIPPRLHQTTTTTISSSSPSSSSFSEMSMNNKNQITMGQFRRRPWPGLFPCSSKALGSCLGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTSAFLRALVTRAANTGSCKILAAITTASSSSSLTTHNFSLMDLASFVDLTPWHRFGFTAANAAILDALDGYSAVHVVDFSLMHCMQIPTLIDAIATRFEVPPLLKLTTVVVAVKDAPPLLDLSYDELGAKLVNFARSKNVSMEFRVVPSCYSDGFANLIEQIRVQHLIYGPENNEALVLNCHMMLHYIPDETFDQNPNPSPNFDMSSSSIRSMFLTAIRSLDPTIVIVVDEDADFTSSKLVSRLRSAFNYLWIPYDSMDSFLPRSSKQREWYEADICWKIENVIAHEGIQRVERLEPKGRWVQRMLNSKFRGVPFGDDAVSEVKTMLDEHAAGWGFKKEDDHLLLTWKGHDVVFATAWVPC 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 72577461 72579008 - Tan0011014.1 Tan03g1648 747152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1648 472 ProSiteProfiles GRAS family profile. 62 470 IPR005202 -
Tan03g1648 472 MobiDBLite consensus disorder prediction 8 33 - -
Tan03g1648 472 MobiDBLite consensus disorder prediction 1 33 - -
Tan03g1648 472 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 469 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Tan03g1648 472 Pfam GRAS domain family 71 469 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0295 Tan-Chr2:2496942 Tan03g1648 Tan-Chr3:72577461 3.50E-100 dispersed
Tan03g1648 Tan-Chr3:72577461 Tan03g1662 Tan-Chr3:72716270 3.90E-44 dispersed
Tan03g1648 Tan-Chr3:72577461 Tan05g1662 Tan-Chr5:46198852 1.70E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27001 PF03514 GRAS 7.40E-92 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1648 - - - 0.0