Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1727 ATGCGATTTCTTGTTATTATTCTTCTTCTGCAACTTCACTTTTCCCCTTCCTTCTCTGCCCTCCTAACCGAATACCAGGCCCTTCTCTCCTTCAAAAACTCCATTTCCGATGACCCTCGTTCTTCTCTCTCCTCCTGGAATGCCGCCGCCGCCCCCCACTGTACTTGGGCTGGCGTCACATGCGACGTCCACGGCCGCGTCGTCGGCCTCAACCTCTCTTCCCTCAACCTCACCGGCACCCTTTCCCCTGACCTTGCCTCTCTTCGACTTCTCACCAATGTTTCCTTCGGTCTCAACAAGTTCTCCGGCGGAATCCCGCCAGAGTTTGCATCGATTGCTTCTCTCCGGCATCTCAATCTCTCTAGCAACGTCCTCAATGGGTCGATTCCTCGCGAGTTTTCGCAGCTGAAGAATCTACTGGTTCTTGACGTTTATAACAACAACTTGACCGGCGATTTCCCCAGAGTGGTCACTGAAATGCCCAACCTCCGCCATTTGCACCTTGGGGGAAATTTCTTCACCGGTCGAATCCCTCCGGAGGTCGGACGCTTGCAGTTCTTGGAGTTTTTGGCGATTCACGGCAATGACCTTGAAGGTCCGATACCGGCGGCGATCGGAAACTTGACGAAGCTTCGGGAACTCTTCATTGGTTACTACAATACCTTCGTCGGTGGAATACCGGCGGCGATAGGGAACTTATCGGAGTTAGTTTGGTTAGATGCGGCGAGCTGTGGGTTGACCGGAAAGTTCCCGCCGGAGCTCGGAAAGTTACAGAAACTCAGTAAACTGTTCCTTCAACAAAATGCTCTGTCTGGGCCATTACCGGAGCTAGGAGGGTTGAAGAGCATAGAAGCGTTGGATATATCATGCAATATGCTTGTTGGTGAAATACCCATCTCTTTTGCAGAGTTTAAGAACTTGAGGCTATTGCAACTTTTCGACAACAAGCTCTCCGGAGAGATTCCGGGATTCTTAGGCGACCTGCCAAAGCTGGAGATATTGCAGTTATGGAACAACAATTTCACAGGTTTGATTCCTCGAAATTTGGGGAAGAACGGAATGCTTCGGACTCTTGATCTTGCTTTCAACCAGTTGACAGGTACAATTCCTCCTGAAATTTGCCATGGGAATCAGCTTGAAATTTTGATCCTTATGGGCAATTCCTTGTCTGGTTCGATCCCAGAATTGTTAGGAAACTGTATTTCACTTACGCGTATACTTCTATGGGGCAACGCTCTCAATGGATCAATTCCAAAGGGGCTTTTGAGTTTGCCAAAACTCACTCAGGTTGATTTGCACGACAATTTTCTCTCTGGAGAACTTCCCATTGCCAATTCAGTCTCAGTTAGCCTTCTTCAGATTACTTTATCGAACAATATGCTCTCTGGATCCTTGCCGCCCACCATCGGCGGCCTTTTGGCCATTCAGAAGCTTCTTCTCGATGGGAATAAGTTTTCCGGTCAGATTCCTTCGAATATTGGGAGATTACAGCAACTATCTCGGATAAATTTCAGTCAGAACAAGTTCTCTGGTAGAATTGTGCCGGAGATAAGTGAGTGCAAGCACTTGATCTTCCTTGATCTCAGTGGAAATGAGCTTTCTGGTCAAATCCCTAACAATATTACCAACATGAAATTATTGACTTATATGAATCTCTCAAGAAACCATTTGGTTGGATCCATTCCTGCTTCAATAGTTAATATGCAGAGCTTAACTTCTGTAGACTTTTCATATAACAATCTCTCTGGTTTGGTTTTGGGAACTGGGCAATTTGGTTACTTCAATTACACGTCATTTCTAGGCAACCCTTATCTCTGTGGAGCATATTTGGGGCCTTGCAAAGATGGGGTTGCCACTAGCAATCAACAAGAACATATGAAAGGCTCCCTCTCAACTCCTCTGAGGCTGCTGCTAGTTTTTGGATCCTTTTTTTGTTTAATTGCCGTGACAGTTGCATTGATCTTCAAAGTTCGGTCATTGAAGAGAGCAAGGGAGTTTCAAGGATGGAGATTAACAGCCTTCCAACGCTTGGGTTTCTCGGTTGATGAGATCTTAAATTGCCTTAAGAAGGGAAATGTTATTGCAAAAGGAGGTTATGGCACAGTATATGAAGGAGTGATGCCAAGTCGTGATCAGGTCACTGTGAAAAGCCTTCCAAAGATGAGCAATGGGGGTTCTAATGACCACGGATTCGATGCCGAGATACAAGCTCTCGGAAGGATTCGACACCGTCACATCGTTAGATTATTGGGTTTCTGCTCGAACCATGACACTAATCTTTTGGTATATGAGTACATGCCTAATGGGAGCCTCTATGAGGTTCTCCATGGCAAGAAAGGAGGTCACTTGCTCTGGGATACAAGGTACAAGATAGCCATTGGAACTGCGAATGGACTTTGCTACCTTCACCACCATTGCTCTCCGCCGATTGTTCATCGAGATGTGAAATCAAACAACATTATGCTAGACACCAACTTCGATGCTCAGCTTGCCAATTCCGGGCTCGCAAAGTTCTTACAAGATTCAGGCACATTGGATAGATCAGCTCTTGTGCCAGAACATGTCTACACACAGAATGCCGACGAGAAGTGGGATGTATATACCTTCGGCATCGTCCTCTTGGAACTTGTTAGCGGTAGGAATCCAACCGGAGAATTAAGCGACAGCATCGACATAGTTCAATGGGTTAGAAGAATGATAGACTTGGAAAAGGAAGGTATACATAAAATCGTCGATCAAAGACTCTCCTCCGTCCCCCTCGACGAGGTGATGCACGTACTCAATGTCGCCATGCTCTGCACTGAAGAAGAGGCAGCAAAGCGTCCCACGATGCGGGAAGTCGTGCGAATGTTAACGGAGCATCAGCAACAATCATTCAGAAACGAGGATAGAGAATGA 2898 46.48 MRFLVIILLLQLHFSPSFSALLTEYQALLSFKNSISDDPRSSLSSWNAAAAPHCTWAGVTCDVHGRVVGLNLSSLNLTGTLSPDLASLRLLTNVSFGLNKFSGGIPPEFASIASLRHLNLSSNVLNGSIPREFSQLKNLLVLDVYNNNLTGDFPRVVTEMPNLRHLHLGGNFFTGRIPPEVGRLQFLEFLAIHGNDLEGPIPAAIGNLTKLRELFIGYYNTFVGGIPAAIGNLSELVWLDAASCGLTGKFPPELGKLQKLSKLFLQQNALSGPLPELGGLKSIEALDISCNMLVGEIPISFAEFKNLRLLQLFDNKLSGEIPGFLGDLPKLEILQLWNNNFTGLIPRNLGKNGMLRTLDLAFNQLTGTIPPEICHGNQLEILILMGNSLSGSIPELLGNCISLTRILLWGNALNGSIPKGLLSLPKLTQVDLHDNFLSGELPIANSVSVSLLQITLSNNMLSGSLPPTIGGLLAIQKLLLDGNKFSGQIPSNIGRLQQLSRINFSQNKFSGRIVPEISECKHLIFLDLSGNELSGQIPNNITNMKLLTYMNLSRNHLVGSIPASIVNMQSLTSVDFSYNNLSGLVLGTGQFGYFNYTSFLGNPYLCGAYLGPCKDGVATSNQQEHMKGSLSTPLRLLLVFGSFFCLIAVTVALIFKVRSLKRAREFQGWRLTAFQRLGFSVDEILNCLKKGNVIAKGGYGTVYEGVMPSRDQVTVKSLPKMSNGGSNDHGFDAEIQALGRIRHRHIVRLLGFCSNHDTNLLVYEYMPNGSLYEVLHGKKGGHLLWDTRYKIAIGTANGLCYLHHHCSPPIVHRDVKSNNIMLDTNFDAQLANSGLAKFLQDSGTLDRSALVPEHVYTQNADEKWDVYTFGIVLLELVSGRNPTGELSDSIDIVQWVRRMIDLEKEGIHKIVDQRLSSVPLDEVMHVLNVAMLCTEEEAAKRPTMREVVRMLTEHQQQSFRNEDRE 965
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 73183948 73187515 - Tan0007418.1 Tan03g1727 747231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1727 965 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 766 959 - -
Tan03g1727 965 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 657 765 - -
Tan03g1727 965 Pfam Leucine rich repeat 114 171 IPR001611 GO:0005515(InterPro)
Tan03g1727 965 Gene3D Ribonuclease Inhibitor 350 617 IPR032675 -
Tan03g1727 965 Gene3D Ribonuclease Inhibitor 278 349 IPR032675 -
Tan03g1727 965 Pfam Protein tyrosine and serine/threonine kinase 689 951 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1727 965 SMART LRR_typ_2 112 136 IPR003591 -
Tan03g1727 965 SMART LRR_typ_2 328 352 IPR003591 -
Tan03g1727 965 SMART LRR_typ_2 353 376 IPR003591 -
Tan03g1727 965 SMART LRR_typ_2 257 280 IPR003591 -
Tan03g1727 965 SMART LRR_typ_2 472 496 IPR003591 -
Tan03g1727 965 SMART LRR_typ_2 160 184 IPR003591 -
Tan03g1727 965 SMART LRR_typ_2 568 591 IPR003591 -
Tan03g1727 965 SUPERFAMILY Protein kinase-like (PK-like) 681 952 IPR011009 -
Tan03g1727 965 SUPERFAMILY L domain-like 353 612 - -
Tan03g1727 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1727 965 SMART serkin_6 688 951 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1727 965 Gene3D Ribonuclease Inhibitor 177 277 IPR032675 -
Tan03g1727 965 Gene3D Ribonuclease Inhibitor 22 176 IPR032675 -
Tan03g1727 965 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 23 133 - -
Tan03g1727 965 Gene3D Phosphorylase Kinase; domain 1 658 765 - -
Tan03g1727 965 ProSiteProfiles Protein kinase domain profile. 688 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1727 965 Pfam Leucine Rich Repeat 451 472 IPR001611 GO:0005515(InterPro)
Tan03g1727 965 Pfam Leucine Rich Repeat 355 375 IPR001611 GO:0005515(InterPro)
Tan03g1727 965 Pfam Leucine Rich Repeat 378 400 IPR001611 GO:0005515(InterPro)
Tan03g1727 965 Pfam Leucine Rich Repeat 547 568 IPR001611 GO:0005515(InterPro)
Tan03g1727 965 Pfam Leucine Rich Repeat 475 496 IPR001611 GO:0005515(InterPro)
Tan03g1727 965 Pfam Leucine Rich Repeat 330 351 IPR001611 GO:0005515(InterPro)
Tan03g1727 965 Pfam Leucine Rich Repeat 306 328 IPR001611 GO:0005515(InterPro)
Tan03g1727 965 Pfam Leucine Rich Repeat 522 544 IPR001611 GO:0005515(InterPro)
Tan03g1727 965 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 134 220 - -
Tan03g1727 965 Gene3D Transferase(Phosphotransferase) domain 1 766 965 - -
Tan03g1727 965 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 332 617 - -
Tan03g1727 965 SUPERFAMILY RNI-like 69 411 - -
Tan03g1727 965 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 955 IPR050647 -
Tan03g1727 965 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1727 Tan-Chr3:73183948 Tan03g2898 Tan-Chr3:82018236 1.90E-106 dispersed
Tan03g1727 Tan-Chr3:73183948 Tan03g1728 Tan-Chr3:73213135 2.90E-22 tandem
Tan01g1453 Tan-Chr1:14636184 Tan03g1727 Tan-Chr3:73183948 1.00E-59 wgd
Tan02g2519 Tan-Chr2:93824280 Tan03g1727 Tan-Chr3:73183948 9.50E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67343 PF07714 PK_Tyr_Ser-Thr 6.70E-37 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1727 - - - 0.0