Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1728 ATGCGTCTTCTTTTTCTTCTTCTTCTCCTCTGTCTTCTGCAACTTCACATTCACCATTCTGTTTCTGCTCGTGTTTCTGAGTACCGAGCCCTTCTCTCCCTCAAAACCTCCATTTCCGGCGACCCCAAATCCTCACTCTCTTCGTGGAACGCCTCTACCAGTCACTGTACTTGGTTTGGTGTCACTTGCGATGTTCGTCGCCATGTCACTGCTATAGACCTCTCTGGTCTCGGCCTTTCCGGTTCTCTTTCACCTGATGTTGCCTTTTTGAGGTTTCTTACTAATCTTTCTCTTGCTGCCAATGAGTTTTCTGGCCCAATCCCGACGGAGATTTCTTCAATCTCTTCGCTTCGGTTCCTTAACCTGTCTAATAATGTGTTCGATGGGTCGTTCCCTTCGCGCCTTTCGCAGCTTCAGAATCTGCAGGTTCTTGACTTGTATAACAACAATATGACTGGGGATTTTCCCATTGTGGTCACTGAAATGATGAACCTCCGTCATTTGCATTTGGGTGGGAATTTCTTCGCCGGACGGATCCCGCCGGAGGTCGGTCGGATGGAGTCCTTGGAGTATTTGGCGGTTTCTGGTAACGAACTTTCCGGTCCGATACCGCCGGAGATTGGAAACTTGACGAACCTTCATGAGCTCTACATTGGCTACTTCAACGCCTACGACGGTGGTATTCCAGCAGAGTTTGGGAATTTGTCGGAGTTGGTACGGTTGGATGCGGCGAACTGTGGGCTCTCTGGCCGGATTCCGCCGGAGCTCGGAAAGCTGAAGAACCTCGATACTCTGTTTCTTCAAGTGAATGCTCTATCTGGGCCATTGACGACGGAGATTGGAGGGTTGAAAGGCTTGAAATCGTTGGATTTGTCGAATAATATGCTTGTGGGTGAGATTCCCAACTCGTTCGCTGAGCTCACGAACTTGACGCTGTTGAATCTGTTTAGAAACAGGCTTCATGGGGCGATTCCTTCCTTTATTGGCGACTTGCCGAAGCTGGAGGTGTTGCAGTTATGGGAGAACAATTTCACGGAAGCGATTCCACAGAACCTGGGGAAGAACGGAATGCTTCAGATTTTGGATCTTTCTTCGAACAAGCTGACTGGAACTCTTCCTCCCGATATGTGCTACGGTAATCGCCTTCAAACTCTGATCGGATTGAGTAATTTCTTGTTTGGTCCAATCCCAGAGTCGCTGGGAAAATGCGTTTCGCTTAATCGTATTCGTATGGGGGAAAATTTCCTCAATGGATCCATTCCAAAGGGGCTTCTGAGTCTGCCGAAGCTCACTCAGGTTGAGTTACAGGACAATTACCTCACCGGCGAGTTCCCAATAACCCATTCAATCTCAGTGAATCTCGGCCAGATTAGTCTTTCGAACAACCGCCTCTCTGGGTCGATTCCGCCGACAATCGGCAACTTCTCCGGCGTCCAGAAACTGCTTCTCGACGGAAACAAGTTCTCCGGTCAAATCCCACCCGAGATAGGGCGGTTACAGCAACTTTCAAAGATTGATTTCAGTAACAATAAGTTATTGGGTCCAATCGCTCCGGAGATTAGCCAATGCAAGCTTCTAACCTTCGTCGATCTCAGCCGGAACGAGCTCTCGGGTGAAATTCCGAACGAGATTACCAGTATGAGGATATTGAATTACCTAAATCTCTCAAAAAATCATTTAGTCGGTGGAATCCCAGCTTCCATAGCCAGCATGCAGAGTTTAACCTCTGTGGATTTCTCATACAACAACCTCTCTGGTTTAGTTCCTGGAAGTGGGCAATTCAGTTACTTCAATTACACATCGTTTTTGGGCAATCCCGATCTCTGCGGCCCATATTTAGGACCATGCAAAGATGGGGTTGCCAATAGCAATTACCAGCAACATGTAAAAGGTCCCCTCTCTGCTTCCCTCAAGCTCCTCCTTGTAATTGGTCTGCTTCTTTGCTCAATTGCATTTGCAGTTGCTGCCATCATCAAAGCTCGATCATTAAAGAGAGCTAGTGACTCTCGGGCTTGGAAATTAACATCCTTCCAACGCCTAGATTTCACAGTCGATGATGTTCTTGATTGCTTGAAAGAGGATAACATCATTGGAAAAGGAGGGGCTGGAATTGTCTATAAAGGGGCGATGCCAAGTGGTGACCAGGTCGCCGTTAAAAGACTGCCGGCCATGAGCCGAGGGTCGTCCCACGACCATGGATTCAACGCTGAGATACAGACTCTTGGGAGGATTCGACACAGACACATCGTTAGGCTATTGGGATTTTGTTCAAACCATGAGACTAATCTTTTGATTTATGAGTATATGCCTAATGGGAGCTTGGGGGAAGTTCTTCATGGCAAAAAAGGAGGTCACTTGCAGTGGGATACAAGGTATAAGATTGCCATTGAAGCTGCTAAAGGGCTTTGCTATCTTCACCATGATTGCTCGCCACTCATTGTTCATCGAGATGTGAAATCAAACAACATACTTCTTGACACTAATTTTGAAGCTCATGTTGCTGATTTTGGCCTGGCCAAGTTCTTGCAGGATTCCGGCACTTCTGAGTGCATGTCTGCCATTGCTGGTTCTTATGGATATATTGCCCCAGAATACGCCTACACACTCAAAGTTGACGAGAAGAGTGACGTCTATAGCTTTGGGGTTGTCCTGTTAGAGCTTGTTAGCGGTAGAAAACCCGTCGGAGAATTCGGGGACGGTGTCGACATAGTCCAATGGGTTAGAAAAATGACAGACTCAAACAAGGAAGAGGTAGTGAAAATCCTCGATCCAAGGCTCTCCTCCATCCCTCTCCACGAAGTGATGCACGTCTTCTACGTCGCAATGCTATGCGTCGAGGAACAAGCGGTGGAGCGCCCAACAATGCGGGAAGTGATCCAAATCCTATCGGAGGTTCCACAGCCACCATGTTCAAAACAGGGAGACTCAACACACCCCAACTCCTCACCAGCACCACCAGCAGCCGCCGCATTGGACCTTCCAACAACAGGAACCAAGAACAAAAAAGACCAGCAGCAGCAGCCGCCACCGGATCTTCTTAGCATTTGA 3048 47.97 MRLLFLLLLLCLLQLHIHHSVSARVSEYRALLSLKTSISGDPKSSLSSWNASTSHCTWFGVTCDVRRHVTAIDLSGLGLSGSLSPDVAFLRFLTNLSLAANEFSGPIPTEISSISSLRFLNLSNNVFDGSFPSRLSQLQNLQVLDLYNNNMTGDFPIVVTEMMNLRHLHLGGNFFAGRIPPEVGRMESLEYLAVSGNELSGPIPPEIGNLTNLHELYIGYFNAYDGGIPAEFGNLSELVRLDAANCGLSGRIPPELGKLKNLDTLFLQVNALSGPLTTEIGGLKGLKSLDLSNNMLVGEIPNSFAELTNLTLLNLFRNRLHGAIPSFIGDLPKLEVLQLWENNFTEAIPQNLGKNGMLQILDLSSNKLTGTLPPDMCYGNRLQTLIGLSNFLFGPIPESLGKCVSLNRIRMGENFLNGSIPKGLLSLPKLTQVELQDNYLTGEFPITHSISVNLGQISLSNNRLSGSIPPTIGNFSGVQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSNNKLLGPIAPEISQCKLLTFVDLSRNELSGEIPNEITSMRILNYLNLSKNHLVGGIPASIASMQSLTSVDFSYNNLSGLVPGSGQFSYFNYTSFLGNPDLCGPYLGPCKDGVANSNYQQHVKGPLSASLKLLLVIGLLLCSIAFAVAAIIKARSLKRASDSRAWKLTSFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPSGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLIYEYMPNGSLGEVLHGKKGGHLQWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDTNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTDSNKEEVVKILDPRLSSIPLHEVMHVFYVAMLCVEEQAVERPTMREVIQILSEVPQPPCSKQGDSTHPNSSPAPPAAAALDLPTTGTKNKKDQQQQPPPDLLSI 1015
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 73213135 73217110 - Tan0003058.1 Tan03g1728 747232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1728 1015 SMART serkin_6 691 939 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1728 1015 SUPERFAMILY Protein kinase-like (PK-like) 683 962 IPR011009 -
Tan03g1728 1015 Gene3D Ribonuclease Inhibitor 89 354 IPR032675 -
Tan03g1728 1015 Gene3D Ribonuclease Inhibitor 19 88 IPR032675 -
Tan03g1728 1015 Gene3D Transferase(Phosphotransferase) domain 1 769 977 - -
Tan03g1728 1015 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 84 327 - -
Tan03g1728 1015 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 660 768 - -
Tan03g1728 1015 ProSiteProfiles Protein kinase domain profile. 691 965 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1728 1015 MobiDBLite consensus disorder prediction 966 983 - -
Tan03g1728 1015 MobiDBLite consensus disorder prediction 997 1015 - -
Tan03g1728 1015 Pfam Protein tyrosine and serine/threonine kinase 693 961 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1728 1015 Gene3D Phosphorylase Kinase; domain 1 657 768 - -
Tan03g1728 1015 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 335 620 - -
Tan03g1728 1015 SUPERFAMILY L domain-like 300 616 - -
Tan03g1728 1015 Gene3D Ribonuclease Inhibitor 355 620 IPR032675 -
Tan03g1728 1015 SMART LRR_typ_2 283 306 IPR003591 -
Tan03g1728 1015 SMART LRR_typ_2 499 523 IPR003591 -
Tan03g1728 1015 SMART LRR_typ_2 186 210 IPR003591 -
Tan03g1728 1015 SMART LRR_typ_2 571 594 IPR003591 -
Tan03g1728 1015 SMART LRR_typ_2 114 138 IPR003591 -
Tan03g1728 1015 SMART LRR_typ_2 356 379 IPR003591 -
Tan03g1728 1015 SMART LRR_typ_2 331 355 IPR003591 -
Tan03g1728 1015 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 769 979 - -
Tan03g1728 1015 MobiDBLite consensus disorder prediction 966 1015 - -
Tan03g1728 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1728 1015 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 965 IPR050647 -
Tan03g1728 1015 Pfam Leucine Rich Repeat 140 157 IPR001611 GO:0005515(InterPro)
Tan03g1728 1015 Pfam Leucine Rich Repeat 526 547 IPR001611 GO:0005515(InterPro)
Tan03g1728 1015 Pfam Leucine Rich Repeat 238 259 IPR001611 GO:0005515(InterPro)
Tan03g1728 1015 Pfam Leucine Rich Repeat 550 571 IPR001611 GO:0005515(InterPro)
Tan03g1728 1015 Pfam Leucine Rich Repeat 116 138 IPR001611 GO:0005515(InterPro)
Tan03g1728 1015 Pfam Leucine Rich Repeat 453 475 IPR001611 GO:0005515(InterPro)
Tan03g1728 1015 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515(InterPro)
Tan03g1728 1015 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515(InterPro)
Tan03g1728 1015 Pfam Leucine Rich Repeat 358 377 IPR001611 GO:0005515(InterPro)
Tan03g1728 1015 Pfam Leucine Rich Repeat 479 499 IPR001611 GO:0005515(InterPro)
Tan03g1728 1015 Pfam Leucine Rich Repeat 286 307 IPR001611 GO:0005515(InterPro)
Tan03g1728 1015 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Tan03g1728 1015 SUPERFAMILY RNI-like 72 391 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1455 Tan-Chr1:14699629 Tan03g1728 Tan-Chr3:73213135 1.40E-23 dispersed
Tan01g1456 Tan-Chr1:14699908 Tan03g1728 Tan-Chr3:73213135 1.60E-23 dispersed
Tan03g1728 Tan-Chr3:73213135 Tan05g2466 Tan-Chr5:75814122 2.10E-87 dispersed
Tan03g1727 Tan-Chr3:73183948 Tan03g1728 Tan-Chr3:73213135 2.90E-22 tandem
Tan01g1551 Tan-Chr1:15796289 Tan03g1728 Tan-Chr3:73213135 2.90E-142 transposed
Tan01g5036 Tan-Chr1:115927786 Tan03g1728 Tan-Chr3:73213135 3.70E-134 transposed
Tan03g0365 Tan-Chr3:52003283 Tan03g1728 Tan-Chr3:73213135 2.70E-54 transposed
Tan03g2898 Tan-Chr3:82018236 Tan03g1728 Tan-Chr3:73213135 1.60E-150 transposed
Tan06g2339 Tan-Chr6:75444043 Tan03g1728 Tan-Chr3:73213135 7.40E-78 transposed
Tan07g0303 Tan-Chr7:6312189 Tan03g1728 Tan-Chr3:73213135 1.10E-64 transposed
Tan07g2168 Tan-Chr7:73265223 Tan03g1728 Tan-Chr3:73213135 3.40E-85 transposed
Tan08g0333 Tan-Chr8:2939791 Tan03g1728 Tan-Chr3:73213135 1.80E-38 transposed
Tan01g3893 Tan-Chr1:103922963 Tan03g1728 Tan-Chr3:73213135 3.40E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67344 PF07714 PK_Tyr_Ser-Thr 1.20E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1728 - - - 0.0