Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1765 ATGGGCAAATCACCCGAGCAAGAGCACCCTAAGAAGGCTTTCGGATGGGCTGCCAGAGATACCTCCGGCGTTCTTTCTCCATTCCATTTCTCCAGAAGAGAAACAGGGGAAAAGGATGTGGCTTTCAAAGTTCTTTACTGTGGGATATGCCATTCTGATCTTCATATGTTGAAGAACGAATGGGGCAATACCATTTACCCCATTGTTCCTGGGCATGAAATTGTGGGTGAGGTAACGGAGGTTGGAAGCAAAGTTGAGAAATTCAAGGTCGGAGACAGAGTTGGCGTTGGATGTATGGTCGGATCCTGCCGCTCCTGTGATAACTGTTCCAACGACCTTGAGAACTATTGCCCCAAAATGATTCTCACCTACTCTTCCAAAGTCTCCGATGGGACCGTAACCTACGGCGGCTACTCCGACTGTATGGTCGCCGACGAGCATTTCATTGTTCGCATTCCCGACGGCATCCCGCTGCAGGGCGGGGCTCCACTGCTGTGCGCTGGCATCACGGTGTACAGCCCCTTGAGATACTATGGACTCGACAAGCCTGGTATGCAAATCGGCGTGGTTGGCCTCGGCGGGCTTGGCCATGTTGCTGTCAAATTCGCCAGGGCCTTTGGCGCTAAGGTTACTGTGATTAGTACCTCCCCTAATAAGAAGCAGGAGGCAATTGAACATCTTGGGGCTCATTCATTCTTGGTCAGCCGTGATCAAAAGGAAATGGAGGCTGCTAGGGGGACATTGGATGGTATCATTGATACAGTCTCTGCTGCACATCCCCTGCTTCCTCTGCTCTCCCTAATCAAAAGCCATGGAAAACTTGTTATGGTTGGTGCACCAGAGAAGCCACTCGAGCTCCCAGCCTTTGCTCTTATTGGGGGTAGGAAAACAATGGCTGGTAGTTGCATTGGAGGGATGAAGGAAACACAGGAGATGATCGATTTTGCAGCCAAACACAATATCACTGCAGACGTCGAGGTGATTCCAGTCACCGACGTTAACAAGGCCATGGAGCGGATGCTGAAACAAGATGTCAAGTATCGATTCGTCATCGACATTGCCAACACACTGAAACCTAGCAATTAG 1086 50.37 MGKSPEQEHPKKAFGWAARDTSGVLSPFHFSRRETGEKDVAFKVLYCGICHSDLHMLKNEWGNTIYPIVPGHEIVGEVTEVGSKVEKFKVGDRVGVGCMVGSCRSCDNCSNDLENYCPKMILTYSSKVSDGTVTYGGYSDCMVADEHFIVRIPDGIPLQGGAPLLCAGITVYSPLRYYGLDKPGMQIGVVGLGGLGHVAVKFARAFGAKVTVISTSPNKKQEAIEHLGAHSFLVSRDQKEMEAARGTLDGIIDTVSAAHPLLPLLSLIKSHGKLVMVGAPEKPLELPAFALIGGRKTMAGSCIGGMKETQEMIDFAAKHNITADVEVIPVTDVNKAMERMLKQDVKYRFVIDIANTLKPSN 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 73478123 73480327 - Tan0002019.1 Tan03g1765 747269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1765 361 Gene3D - 167 323 - -
Tan03g1765 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Tan03g1765 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 321 IPR036291 -
Tan03g1765 361 SUPERFAMILY GroES-like 20 184 IPR011032 -
Tan03g1765 361 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Tan03g1765 361 Gene3D - 16 353 - -
Tan03g1765 361 FunFam Uncharacterized protein 16 166 - -
Tan03g1765 361 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Tan03g1765 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Tan03g1765 361 Pfam Alcohol dehydrogenase GroES-like domain 37 154 IPR013154 -
Tan03g1765 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491(InterPro)
Tan03g1765 361 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0062 Tan-Chr3:6703653 Tan03g1765 Tan-Chr3:73478123 2.30E-27 dispersed
Tan03g1765 Tan-Chr3:73478123 Tan07g0907 Tan-Chr7:17673509 1.10E-147 dispersed
Tan03g1765 Tan-Chr3:73478123 Tan01g0671 Tan-Chr1:6387611 1.00E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1765 K23232 - csv:101222715 676.011