Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1777 ATGCTTCCTCGTTTGAAATTCTTCTATCCTAGGCTGTGTTTAATTGTTACTATCTATAAGATGGGAACTCAAAGTTCAGGATTCATAGTACAAAAAAAGATGCTTCCTCCTCAACCTGGAAGATTTGAAGATCGTGAAGACCTCATTAAATATGTTCGTGATTTTGGTGCTGATCAGGGATATGTGGTAACCATTAAGAAGTCTAGGAAAGATAGAAGGGTCATCCTTGGTTGTGATAGAGGAGGTGTGTACCGTAACAGGCGTAAGATTGATGAGAGTCGGCGCAAAAGGAAAGCAAGCTCACGCTTGATAAATTGCCCGTTTGAAGCAATTGGCAAGAAGGAAGACGATGTTTGGATGCTTACCATTAAAAATGGGGACCATAACCATGAGCCCTTAAAAGACATATCAGAGCATCCTTACAGTCGCCGTTTTACTGAGGATGAAGTAAGGAAAATAAAAATGATGACTGAAGCTGGTATAAAACCACGTCAAGTGCTTAAAGCTCTCAAGCAACACAATCCAGATCTGCAGTCAACGCCAAGGCATTTGTACAACCTTAAAGCCAAGATTCGCCAAGGAAATCTATCAGAAAAAAATTTCAAGTCATGGAGACCTAATATTTCAGTTCCTGCAAATAGTAGTCTCATTGGGGATCCAGTCAAGCAAAGGCATCAGCTGAAGGTTCCTAATTTAATTGGAGGGGAGTTTTTGGATTCACGCAACTGTCCATTGGTTGATGTCATTAATCCAGCAACACAAGAAGTTGTTTCTCAAGTTCCTTTAACAACCTATGAAGAGTTTAAGGCTGCAGTTAATGCAGCCAAACAAGCTTTTCCCTCATGGAAAAACACACCGATTTCGACTCGTCAACATATTATGTTCAAGTTCCAGGAGCTCATCCTCAGGGACATGGATAAGCTTGTGACGAATATCGTCACAGAACAGGGCAAACCATTAAAGGATGCTCAGGATGACATCCTCTGTGGTTTAGAGGTGGTTAAACATGCTTGTGGATTGACCACTATGCAAATGGGGGAGTTCATCCCTAATGCATCTGATGGAATTGATTCCTACTGCATCCGAGAACCAATAGGTGTTTGTGCTGGGATATGCTCTTTTAACCATCCAGCAACAATTTCCTTATGGATGTTTCCGATTGCAGTTACATGTGGCAATACATTTGTTCTTAAGCCATCTGAAAAGCACCCAGGGGCATCAATGTTGCTAGCTGCATTAGCAGTGGAGGCTGGTTTGCCTGATGGTGTTCTAAATATTGTTCATGGAACCCATGATATGGTTAACTATATATGTGATGATGTGGACATAAAAGCCATATCTTTTGCCAGTTCAATTTCAGCTGGAAAGAACATATATGCTCGGGCGGCTGCTACTGGAAAGCAAGTTCAGTCCAACTTAGGAGGCAAGAGCCATGCAATTATCATGCCTGATGCTAACATGGAGGCTACTTTAAGTGCTCTGGTTGATGCTGGATTTGGTACTGCTGGACAGACGTGCATGGCTATCAGCATTGTTGTCTCCGTTGGAAGTTCAATTTTATGGGAAGAAAAACTTGTGGAATATGCTAAAGCACTTAAAGTAAATGTGGGGACAGATCCCCTTGCTGACCTTGGTCCTGTAGTTACCAAAGAGGTGAAGGATCGCTTTTGTAGATTAGTTCAAAGTGGCATTGAAGGTGGTGCTAGACTTCTGCTTGACGGTAGAGATATTGTGGTCCCAGGATATGAAAATGGAAATTTTGTTGGTCCTACCATTTTATTTGATGTAACAACTGACATGGAGTGCTACAAGGAAGAATTTTTTGGACCAGTTCTCCTTTGTATGCAGGCTGACAACCTAGAAGAGGCTATATCCATTGTAAACAGAAACAAGAACCGAAATGGAGCTTCCATATTCACAACTTCTTGCATTTATGCGAGGAAATTTCAGAGTGAAGTGGAAGTGGGAATGGTTGGTATAAATGTTGCTGTTCCAGTTCCGTTGCCATCTTCCTTTAATGATAAGGCAGGCCTGGAATTTTACACCCAATTGAAAAGAGTGGCTCAACAGTGGAAGAACTTACCAAATATTGGGGTCTCAATGGCGGTGCCTTCACCATCTGAGAGATATTTGAGAGCTCGGGCTGTACCCTCAATGTTGCTTTCAACGTCTGAGAAAGATTCACCTGGTGGGCGGCACAGAAGTTTACCCCCGTTGCCTTCCACATCTGAAAGGGATTCACCTATCGATGCTGTACTGATGCCAAACCCTCGAATATCTCAGCCAGATTTAACCAATGAAAGAGCCACCACCTCTCCGCCAACTCCTGATAGGGATTTGCACGGTCAAGGACTCTCCCTGATTTCTACTTTATCATCAGAGGGGGATGTATCCAACCATGATTTGTCTCCTGCTATACCTTCGGCAGGTGATAGAGATTTACCTGGCCAAGCTATGTCAGTGGCAACATCCAGATCATCTGAGAGACTCTACATACCTCAGAAATCTCATTGGAATGAAGCCCAGCGGGCTGATTCAATTCCATCCACTTCTGAGAGGGCCCATGTGCTCTCATCGCAGACAAATAGCATCAAAGCACAGGCATCTCGAACAGCTCATCCAGCTTTGGTCTTAGCTGCAGAGGGGTTATATGTGCCTACATCTCATGACAGTATTTGTCTGATAACCCATGGAAATGACAGCGTAGTTCCATCTCGAAGAATCGACGGCATGTGTCAATCATCAGAACGGATGTACATGCTAGCATCTTCCCATTTGAACGACAGTATGAGTAGTCAAACATTGCAGAGAACTGATACCTCACTGTTTTCTTCTTCAGAGAGGCATTATGTGGCTCCCACTTCTCATAGAAATGACCACATAAGCTTGGCCTCTCATACCGACGTTGATTTGCAATCAACTTCAGATAGAATGTACTTGTCTAGCTTGTCTGAGAGGGACGATAATATGGTTTCTGCTGCTTCTCAACAAGCTGAATCTTTAACGTCCACTTCAGAGAGAATGTATATTCCTCCATTAGTTCATAGAAATGCAGGCATGCCACCGAAATCAGAATGGTTATGCATTCCCACTCCTACCGTATCTCAGAGAATGTATCCACAAGATCCAATAGTTTCAGCAGATGAATTTCAAAGCCAAGAAGCATCATTGACATTGCCTGCATCGCAAAGAATATGA 3198 42.93 MLPRLKFFYPRLCLIVTIYKMGTQSSGFIVQKKMLPPQPGRFEDREDLIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDVWMLTIKNGDHNHEPLKDISEHPYSRRFTEDEVRKIKMMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSEKNFKSWRPNISVPANSSLIGDPVKQRHQLKVPNLIGGEFLDSRNCPLVDVINPATQEVVSQVPLTTYEEFKAAVNAAKQAFPSWKNTPISTRQHIMFKFQELILRDMDKLVTNIVTEQGKPLKDAQDDILCGLEVVKHACGLTTMQMGEFIPNASDGIDSYCIREPIGVCAGICSFNHPATISLWMFPIAVTCGNTFVLKPSEKHPGASMLLAALAVEAGLPDGVLNIVHGTHDMVNYICDDVDIKAISFASSISAGKNIYARAAATGKQVQSNLGGKSHAIIMPDANMEATLSALVDAGFGTAGQTCMAISIVVSVGSSILWEEKLVEYAKALKVNVGTDPLADLGPVVTKEVKDRFCRLVQSGIEGGARLLLDGRDIVVPGYENGNFVGPTILFDVTTDMECYKEEFFGPVLLCMQADNLEEAISIVNRNKNRNGASIFTTSCIYARKFQSEVEVGMVGINVAVPVPLPSSFNDKAGLEFYTQLKRVAQQWKNLPNIGVSMAVPSPSERYLRARAVPSMLLSTSEKDSPGGRHRSLPPLPSTSERDSPIDAVLMPNPRISQPDLTNERATTSPPTPDRDLHGQGLSLISTLSSEGDVSNHDLSPAIPSAGDRDLPGQAMSVATSRSSERLYIPQKSHWNEAQRADSIPSTSERAHVLSSQTNSIKAQASRTAHPALVLAAEGLYVPTSHDSICLITHGNDSVVPSRRIDGMCQSSERMYMLASSHLNDSMSSQTLQRTDTSLFSSSERHYVAPTSHRNDHISLASHTDVDLQSTSDRMYLSSLSERDDNMVSAASQQAESLTSTSERMYIPPLVHRNAGMPPKSEWLCIPTPTVSQRMYPQDPIVSADEFQSQEASLTLPASQRI 1065
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 73510572 73524088 + Tan0016826.1 Tan03g1777 747281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1777 1065 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 499 510 IPR016160 GO:0016491(InterPro)
Tan03g1777 1065 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 34 704 IPR010061 GO:0004491(InterPro)|GO:0004491(PANTHER)|GO:0005739(PANTHER)|GO:0006210(PANTHER)|GO:0006574(PANTHER)|GO:0018478(PANTHER)
Tan03g1777 1065 SUPERFAMILY ALDH-like 224 693 IPR016161 GO:0016491(InterPro)
Tan03g1777 1065 Pfam Transcription factor AFT 42 131 IPR014842 GO:0000981(InterPro)|GO:0010106(InterPro)|GO:0045944(InterPro)
Tan03g1777 1065 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 233 480 - -
Tan03g1777 1065 MobiDBLite consensus disorder prediction 722 783 - -
Tan03g1777 1065 CDD ALDH_F6_MMSDH 229 691 IPR010061 GO:0004491(InterPro)
Tan03g1777 1065 MobiDBLite consensus disorder prediction 759 777 - -
Tan03g1777 1065 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 248 473 IPR016162 GO:0016491(InterPro)
Tan03g1777 1065 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 231 691 IPR010061 GO:0004491(InterPro)
Tan03g1777 1065 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 474 673 - -
Tan03g1777 1065 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 474 668 IPR016163 GO:0016620(InterPro)
Tan03g1777 1065 Pfam Aldehyde dehydrogenase family 245 665 IPR015590 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1130 Tan-Chr2:22734620 Tan03g1777 Tan-Chr3:73510572 8.80E-194 dispersed
Tan02g1131 Tan-Chr2:22734620 Tan03g1777 Tan-Chr3:73510572 9.30E-162 dispersed
Tan03g1777 Tan-Chr3:73510572 Tan09g2198 Tan-Chr9:71992034 1.70E-42 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1777 K00140 - csv:101207178 1754.18