Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1950 ATGACGGGTAGAGGATCATCGGGAAGGACGCCGACGTGGAAGGAAAGGGAGAACAATAAGAGGAGGGAGAGGCGGCGGAGGGCCATTGCTGCTAAGATCTACACTGGCCTCAGAGCTCAGGGGAACTATAAGCTTCCTAAGCACTGTGACAACAACGAGGTCTTGAAGGCGCTCTGTAATGAAGCTGGTTGGATGGTTGAAGAAGATGGCACCACCTATCGCAAGGGATGCAAGCCACCTCCGATTGATATTGGTACTTGTGCAAACATGAGTGCCTGTTCCTCTCTTCAACCAAGCCCACAATCTTCATGCTTCCCGAGTCCTGTACCATCCTACCATGCCAGCCCTTCTTCATCCTCTTTTTCAAGCCCAACTCGATTTGACGGGAATCCATCTTCTTATCTTCTGCCATTCCTTCAAAACATAACCTCTATACCTGCTAATCTCCCTCCTCTCAGAATATCAAACAGTGCACCTGTTACTCCACCTCTTTCTTCCCCGACGTCAAGGGGTTCAAAGCGAAAGCCTGACTGGGAGTCCATTCCGAATAGCTACATGACATCTTTCCGCCATCCCCTCTTTGCTGTCTCTGCTCCTTCAAGTCCTACAAGATGTCACCATCTTACACCAGCAACAATTCCAGAATGTGATGAGTCTGATGCTTCAACGGTGGACTCTGGCTGCTGCGTCAGCTTCCAGACCATGGCGCCTTCTGTGGCTCCTCCTTCTCCTACTTTTAATTTGATGAAACCAGTGAGTCAGCAGAAATCCCTCCAGGATTCAGTTGACAGACACGGAGCAATGGGCTGGGGTGCTGCATCTGATAGAGGTCGAGGCTCTGAGTTTGAATTTGAGAAATTTGAGAGTGGCAAAGTGACACCATGGGAGGGTGAGAGAATTCATGAAGTTGGGATGGATGATTTAGAGCTTACACTTGGGAATGGGAAGGCTCGTGGTTAA 960 49.48 MTGRGSSGRTPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCNEAGWMVEEDGTTYRKGCKPPPIDIGTCANMSACSSLQPSPQSSCFPSPVPSYHASPSSSSFSSPTRFDGNPSSYLLPFLQNITSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESIPNSYMTSFRHPLFAVSAPSSPTRCHHLTPATIPECDESDASTVDSGCCVSFQTMAPSVAPPSPTFNLMKPVSQQKSLQDSVDRHGAMGWGAASDRGRGSEFEFEKFESGKVTPWEGERIHEVGMDDLELTLGNGKARG 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 74643878 74646926 + Tan0002851.1 Tan03g1950 747454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1950 319 MobiDBLite consensus disorder prediction 156 178 - -
Tan03g1950 319 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 129 IPR008540 -
Tan03g1950 319 MobiDBLite consensus disorder prediction 10 24 - -
Tan03g1950 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 6 318 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Tan03g1950 319 MobiDBLite consensus disorder prediction 156 171 - -
Tan03g1950 319 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1938 Tan-Chr2:87961930 Tan03g1950 Tan-Chr3:74643878 1.60E-86 dispersed
Tan03g1950 Tan-Chr3:74643878 Tan05g2533 Tan-Chr5:76686586 1.50E-52 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27045 PF05687 BES1_N 4.80E-63 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1950 K14503 - csv:101216171 542.732