Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1952 ATGCTAAAGTGCTTATTGGTCATAGCTTCATTGCTTTTCTCCTCCACCTTTGCACAGAACGACCTCCTCCCAAAAGAGAAATGGCTCACTTTGAAAGGGCAAGAGCCATTAGTGATAGCAAGAGGAGGGTTGTCTGGAGCGTTTCCAGAATCAAGCATGCTTGCCAATGAAATAGCAATTGCTCAAGGTTTGCATAATACAGTTTTACACTGTAACATTCAACTAACCAAAGATGGCACAGCCATTTGCTTAACTGATCTTAAACTTCAAAACTCAACCAACATTGACGAGGTCTTCCCCAAAGCTCGCAAGACTTACAAAATCAATGGAAGACCTACCAAAGGATGGTTTTCTGTTGATTTCAACTCTGAAGATCTCCTCGGCAAAGTCAGCTTGATTCAAGCTGGCATTTCCCGTCCTAGTATTTTTGATGGTATTTTGCCCATTTCTACTCTTGAAGATATCTCTGGACTTAATCCAACCCTTTGGTTGAACGCTCAGCACGAAGCATTCTACCTAGAACACAGTCTTAGTGTAACATCATTCCTTCAAAAGTATTTGAAACTGGTGCACGTAAGCTTTGTGTCGTCTCCTGAGATCGGAATATTGAAAGGGTTAGTTGGGAGTGTGAACAATGGCAAGACAAAGCTGATCTTTCAATTCTTGGGAGCCATTGAAATAGAGCCAACCACTGGCAAAACATATGGTGAATTGGCTAAAGATCTGGCTATGTTTAAGTCCTTTACCTCGGGAATTCTTGTCCCAAAAGAATACATTTGGCCACTTGGTCCAGACGATTATGTGCAGCCTGCAACAACCCTTGTCACTGATGCTCATAAGCTTGGCTTGGAAATCTATGCTTCTGGCTTTGCAAACGATGCCATTGTTGGCCATAATTATAGTTATGATCCTGTCCGTGAGTACCTTCAGTATATTGATAATGGCCAATTTGCTGTGGATGGTTTTCTTACTGATTTCGCTTCTGCTGCTTCTCAAGCCATTGCCTGCTATGTCAGTTTTCGCAATGACGGCAAGGTTCCGCCTGGAGAAAAGGAAACGTTGGTGATAAGCAGCAATGGGGCAAGTGGGGATTTTGCAGGGTCAACAGACCTTGCATACGAAGGAGCCGTTAATGATGGGGCTGATGTAATTGATTGTTCAGTACAATTATCAAAAGATGGAGTTCCTTTCTGCATGGACACAGCTGATCTTTTGCTAACTACCACAGTTGTCACTACTTTCTCTGATAAAACTTCAAGTGTCCCTGAAATTCAACAAGAACCTGGAATCTTCTCTTTTGATCTTACTTGGTCCCAGATTCAAACAATCAAGCCTCAAATCGTAAGCCCTTACTTGTCCGTTACTGGACTTGCTCGAAATCCTGCCTTTAAGAACAAGGGCAAGTTCATGACCCTCCCTGACTTTCTCGAGTTCGCCAAAGCCAAAGCTGTTTCTGGGATCATGATCAACATCCAAAATGCAAGGTACTTGGCTGCAAACAAAGGTCTTGACATGGTCGGAACCGTAGCATCGGCGTTAAGCAACGCGAGTTTAGAGAAGCAATCAACACAAAAGGTATACATAAGGTCGGATGACACATCGGTGTTGTCGATTTTCAAAACCAAGTTTCCAAGTTTGACAAGAGTGTTAACTTTGGATGGGAAGTTTGGAGATGCCCCTAAAGATGCAATTGAAGAGATCAAAAACTATGCTGAAGTTGTGGCCATTCCTCGTATAGCGCTTGTCAAAACAACAAACTATTTCACCACTGGCACCACCGAAATCGTCGCTGAGATGAAGGCTTCCAATGTATCCATCTTCGTTTATGTCCTGAGAAACGAATACATCTCCTTAGCCTTTGATTTCTTCTCCCAAGCCTCCCTCGAGATCTCCACCTACGTCGACTATTTCCACGTCGATGGCCTCATCACCGAATTTCCTTATACTGCCAAACGATTCCTAACGTGTCCTTGTCGACCAACTGGAACTGGAACCGCGAGTGACGATACATTTGTAATCTTGCCAACTGAAATTGGTTCTCTCTTGAATATGGTGCCTAAAGAAGCTAGACCACCTGTTGATCCTCCGATGCCGCCATTGAAGCCCGCAGATGTCATCGACCCACCGCTCCCGCCGGTGAGCAATAATGTGTCGACCGCCGTCCCTCCCACCACCGTTCCCGCCACCCCATCAGCCGCTGTATCAAATGTTGCTAACTTGTTGTTTTCTCTACTCTCAGTTGTTGTTGTGCTCACCTTGCTTTCTCACTCTGCACTGTAA 2280 44.34 MLKCLLVIASLLFSSTFAQNDLLPKEKWLTLKGQEPLVIARGGLSGAFPESSMLANEIAIAQGLHNTVLHCNIQLTKDGTAICLTDLKLQNSTNIDEVFPKARKTYKINGRPTKGWFSVDFNSEDLLGKVSLIQAGISRPSIFDGILPISTLEDISGLNPTLWLNAQHEAFYLEHSLSVTSFLQKYLKLVHVSFVSSPEIGILKGLVGSVNNGKTKLIFQFLGAIEIEPTTGKTYGELAKDLAMFKSFTSGILVPKEYIWPLGPDDYVQPATTLVTDAHKLGLEIYASGFANDAIVGHNYSYDPVREYLQYIDNGQFAVDGFLTDFASAASQAIACYVSFRNDGKVPPGEKETLVISSNGASGDFAGSTDLAYEGAVNDGADVIDCSVQLSKDGVPFCMDTADLLLTTTVVTTFSDKTSSVPEIQQEPGIFSFDLTWSQIQTIKPQIVSPYLSVTGLARNPAFKNKGKFMTLPDFLEFAKAKAVSGIMINIQNARYLAANKGLDMVGTVASALSNASLEKQSTQKVYIRSDDTSVLSIFKTKFPSLTRVLTLDGKFGDAPKDAIEEIKNYAEVVAIPRIALVKTTNYFTTGTTEIVAEMKASNVSIFVYVLRNEYISLAFDFFSQASLEISTYVDYFHVDGLITEFPYTAKRFLTCPCRPTGTGTASDDTFVILPTEIGSLLNMVPKEARPPVDPPMPPLKPADVIDPPLPPVSNNVSTAVPPTTVPATPSAAVSNVANLLFSLLSVVVVLTLLSHSAL 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 74663266 74667524 - Tan0008222.1 Tan03g1952 747456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1952 759 ProSiteProfiles GP-PDE domain profile. 36 334 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Tan03g1952 759 CDD GDPD_SHV3_repeat_1 36 333 - -
Tan03g1952 759 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 3 742 - GO:0008889(PANTHER)
Tan03g1952 759 ProSiteProfiles GP-PDE domain profile. 353 654 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Tan03g1952 759 Pfam Glycerophosphoryl diester phosphodiesterase family 360 647 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Tan03g1952 759 Gene3D Phosphatidylinositol (PI) phosphodiesterase 34 334 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Tan03g1952 759 Gene3D Phosphatidylinositol (PI) phosphodiesterase 352 655 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Tan03g1952 759 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 351 654 - -
Tan03g1952 759 SUPERFAMILY PLC-like phosphodiesterases 35 333 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Tan03g1952 759 SUPERFAMILY PLC-like phosphodiesterases 353 654 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3146 Tan-Chr1:84994266 Tan03g1952 Tan-Chr3:74663266 1.40E-152 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1952 - - - 0.0