Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1972 ATGGCGAATATGTGTGCCGACAGTGGCAATCTTATGGCGATTGCTCAGCAAGTTATGAAGCAGAAGCAGCAACAGGAGCAGCAACAGCAGCAGCACCCACAGCAACCGCTGCAGCAGCTCACTGGGCCTTGCACTTTTGCTCTGAACCCATGGAGTGGCTCCAACCATGGTCTCTCCGGTGCTCCAGATTTGGGGTTTGGGCTCGCTGGAACTGGATATTCCGACCCGTTTCAGGTGCAGAGAGTTGTTGACGGTGGAGAAGCAAGCTTTCAGTTCCCGAACTTGGAGCACCATTCTTCTGCTTTCAGATTTTCCGATTTCGACGGCGGCGCTGCTGCAGATTTCGACTCTGATGAGTGGATGGACAGTCTAATGGCTGGTGGAGATTCAACGGATAGCTCTAATCTTCCTTCTGGTTGCGACGCGTGGCAGTCTAATTCGGATTTTGCTTTCTACGGTGCCGATCCCTTTGTCCCCTGTCCCAGTCGCCTCACTATTCCCTGTTCTTCACCCTCTGATCTTAACAGAGTCATTTTCCCTGAACCTCCGAAAAATCAAACCGCCGTTCAACCGCCGGTGGTTACATGGACAGGACTTCCGCCGGCGACTCCACCGGTGGTGGTTAAGGACACTCAGGTCCCCAACGTTCCCCTTGCGATACACAAGAGTGAAGATAACGGCGCTTCGTCGAGTTCTGCAGAGACTGAATCGACGCCGCCACTTCTTAAAACCCTAATTGAATGTGCTCGACTTGCCGAATCGGAGCCAGATCGATCGGCGCAAATGTTGATTCAGCTTAAGGAATCGTCATCGGAGCATGGAGATCCGACGGAGAGAGTAGCCTTTTACTTTCTCGAAGCTCTATGCCGGAGATTATCACTTCAATCGGAGAATCGTTTAGTTTCTTCTGAATCCAGCTCAGATGATTTCACTTTCTCTTATAAAGCTCTCAATGATGCTTGCCCCTACTCTAAATTCGCCCATTTGACTGCGAATCAAGCTATACTCGAAATGACAGAGAACGCGAGCAAGATTCACATAATTGACTTTGGGATTTCTCAGGGAGTTCAATGGGCGGCTCTACTACAAGCTCTCGCAACCCGCTCCACCGGAAAACCAACTGAAATCCGGATCTCCGGAATTCCGGCTCCGATGCTCGGGAACTGTCCGGCGACGTCGCTGTTCGCGACGGGTAATCGACTGGCCGAGTTCGCTAAGCTTCTAGAACTGAACTTCGAATTTGACCCAATCCTCACCCCAATCGAAGAGCTGAACGAATCCTCCTTCCGAATCGACTCCGACGAAACCCTCGCCGTGAATTTCATGCTTCAACTGTACAATCTCCTCGACGAAACTCCTCGCGCCGTTCTGAACGTTCTGCAACTCGCTAAATCACTGAACCCTAGAATTGTAACTCTCGGCGAATACGAAGCCAGCCTGAACCGGCTCGGGTTCTTCAACCGGTTCAAGAACGCCGTCAGATACTACTCGGCCGTGTTCGAATCACTGGACCCAAAATTACCTCGCGACTCAAACGAGAGGCTGCAACTGGAAAAGCTCGTACTCGGCCGGCAGATCGCCGGCGTTGTCGGACCGGTGTCGTCGCCGGGAGCGAAAACCGAACGAATGGAAGACAAAGAACAGTGGAAAATGATGATGGAAAATTGCGGTTATGAACCAGTAAATCTCAGCCATTACGCCAAAAGTCAAGCTCAAATCCTTTTATGGAAGTACGATTACAGCTCTGAGTATTCTTTGATCGAATCCTCACCTGGGTTTCTCTCGTTGGCCTGGAACGAAGTCCCCATCATTACAGTTTCTTCATGGCGTTGA 1833 50.95 MANMCADSGNLMAIAQQVMKQKQQQEQQQQQHPQQPLQQLTGPCTFALNPWSGSNHGLSGAPDLGFGLAGTGYSDPFQVQRVVDGGEASFQFPNLEHHSSAFRFSDFDGGAAADFDSDEWMDSLMAGGDSTDSSNLPSGCDAWQSNSDFAFYGADPFVPCPSRLTIPCSSPSDLNRVIFPEPPKNQTAVQPPVVTWTGLPPATPPVVVKDTQVPNVPLAIHKSEDNGASSSSAETESTPPLLKTLIECARLAESEPDRSAQMLIQLKESSSEHGDPTERVAFYFLEALCRRLSLQSENRLVSSESSSDDFTFSYKALNDACPYSKFAHLTANQAILEMTENASKIHIIDFGISQGVQWAALLQALATRSTGKPTEIRISGIPAPMLGNCPATSLFATGNRLAEFAKLLELNFEFDPILTPIEELNESSFRIDSDETLAVNFMLQLYNLLDETPRAVLNVLQLAKSLNPRIVTLGEYEASLNRLGFFNRFKNAVRYYSAVFESLDPKLPRDSNERLQLEKLVLGRQIAGVVGPVSSPGAKTERMEDKEQWKMMMENCGYEPVNLSHYAKSQAQILLWKYDYSSEYSLIESSPGFLSLAWNEVPIITVSSWR 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 74808985 74811350 + Tan0016777.1 Tan03g1972 747476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1972 610 ProSiteProfiles GRAS family profile. 232 610 IPR005202 -
Tan03g1972 610 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 234 609 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Tan03g1972 610 MobiDBLite consensus disorder prediction 17 45 - -
Tan03g1972 610 Pfam GRAS domain family 242 610 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1312 Tan-Chr1:12907859 Tan03g1972 Tan-Chr3:74808985 1.50E-175 dispersed
Tan03g1972 Tan-Chr3:74808985 Tan11g1400 Tan-Chr11:12468463 5.50E-51 dispersed
Tan03g1972 Tan-Chr3:74808985 Tan08g2009 Tan-Chr8:72165090 2.30E-44 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27050 PF03514 GRAS 5.50E-110 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1972 - - - 0.0