Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1999 ATGGACAATCTCTCCCATTCTCGCCTCCCTAACAGGGGTTCTACCTCCGTTTCTAAGAAAATCTGCAATGGCAGTAATGGCGGTGGCTCTTTTGTAGCTCAGACTATCTACGACGACGTTTATGGCGGTCCTCCCAAGTTTGGAGTCTCTGCTTTGTCTCCTCGCTTCGAAGACTACGGTGAGATTTTCGGGAGCTTCCATGCCCTCCGTGCTTCCTCGATTCCGATTCTTGATCTTCCGGCTGTTGATGAGTCTGAGGTCTTCTTCGACGCTCGGAGCTCTGCATTTGACTATGCGGAGGTTTTTGGAGGGTTCGATGGTTTGGATTTCGCGGTTTCTTATGAGGAACTGGTTGGCCCGTCCAAAGCCGTTGATGACGGTTCTTCCGATGAAGCTTGGACTCCAGCAGGTACTGAATCTTTGTCAGACTGTTCGGATCATTCTGGAAACTCTCATTGTATGTCAAATGAAGACTCTAATCAGTCATTTGGTGGAAACACTGACTTTTGCATATCGTATAACGAGGTTAACCGAGAAGGCAATGGAAATATATCAAATGGGAAGATACACGTAACTCAGTTGGAGATGCTTCCTGGATTCTCATATCTGGTTGATGAAGCAAATCCCTCGCCGAAGGAAACAGATGACGATCCATCACTGCAGACCAATGATGATAGCTATCTCAATATAGATTTTGATACAGGAAAGGTAAAGACCAAACATCCAAGAAACACTATGCCACCCCCGGTGGACAGTAATGGCTCTGGACCATTGTTTGAGGATAGCCTTATTTCTCAAAATGGATATAGTAGAGGTGTTTGTCGTTCACATGAGGATTTCATAACCGTATCTGAAATAAGCCTTAGAACTGAACCCTCTCAAGTGCCACCACCTTCTCGATTGCCTCCCAAGTTTGCTGCCAAGAAGGGGGACGACACTAAAATGGCTTTGAATGGTGAGGAAGCTGCTTCTGAAATAATTTCGGATGATCATTCTCTTCCTTTATTTGATGTGGAGGTAGACGCTAGCTCATCTGCAGCAGCTTCTGCTGCAGCAATGAAAGAAGCAATGGAAAAAGCTCAAGCACAGTTACAAAATGCAAAAGATTTGTGGGAGAGGAAGAAGGAAGGGGCCCATGGACGGATGAGACTGGATGCAAAAAATGATATGGGAGAAAAGGAAAGAATTTTGACTAAGATTCCAAATCGATTTAAGAGTTTGGCCGATGAAAGGGTGCAGGGTATTGGTGAAATTCGTGACCATATGATAAATTTTCCTGCTAGAGACGAGAGGCAAAAGGATGAGAAGGCAACAGAAGTTTGTTCAACACCATATGGAGGAGAGGAACTTCTAACAGTTGCTGTTAAGACTGTACCAATTAGAAGTGGGAGTAGATTTCTTGTGTCCGACAATTATGATTGCTGCAGTGAATGGAAAGATGCCACAGAGTTTTTTGAATTGGCGAGAACAGATATATCTGGAAAGGAATTTGAGTCTGTGAACAATAATGAAATTTCCAACTTTGTGACTGGACAAATGGGAACAGAGACCATCATTGAAGCATGGGAGAACAATAAAGATCGAGACAAGAAAGGGAAACCATTCCATATGGCTCATGCTCTGAATGAGGAGGTGAAGAATTTGGGGAATATGGTCCATGTAAAGGAGGAAGATAAGATAAAACTAAAACCAAATAAAAATGAGACTAAGCAAAAAGAGCAGGTGAAATTAAAAATTCATCCAGGTGTTTGTGATCTTGAAGCAAATGATAGGAAATTTGGAGTTGCGGAAGAGTTGGTTGAAGTAAAAAAGCAAATGTCTGATGCTAGTGAACTAGAGAAACATGAAAAGCCTATTGAGTTTAGACAACTGGACAGTGAGCTAAAAGTTAAGCAACCTGTTTTACCAATGGATATTGAACAAGAAAAGAAAAAGGTTGTTAAAAGAAAGCAAAATGGAAATATTCTGAAGGATTCTCATAGAAAAGAAAACAATACAAATAAAGCGGAAGAAGCCATTGAGAATGAGAAGAGAGAGAAACTGTTCACCGAGGCTTCTGAAAGGGAAAAGCTTGAGCAAAAAATGATGATGTTCCTCGAGCAACAAGAAAATAAGAAAAGACTGAATTTGGTTCTTGAGGATGGGAACTTTAAGGGACAAATGGATCGTGAAAACCAACTGGAAGGAGTTCATGAGAAAGAAGATCATGGGAAAAAGGGAAAAGAGGCTGCCAAAGTTGGAGTAAGTGAGAGATCTAAATTAGCTCATGAGAGAGAAGATGATGATGACAAATGTCCAAAAGATTTTCAGTACAGAGAAAAATGTGAAAAAGGAATTGAGGATTCATTTCAGCGTTTGAACATTGAAGGCATGCCAAGTGATGTGGGTAAGTGTAAAGTGACTCAGCTGTTGGTTGAAGATTCTCAATATAGTGCAGATCTCAAGGGTACAAGTATGGAGCATGATGAATTAGAGAGAGTGAAGGACGAACACAAAGTAAATTCAACAATAGGATCTCAAGCATATGTGGAAGTGACGGATTTGGGGATATCTGCTCCTGCATTTCAAATGAATGATGACAAAAACCACTTACCCACTGGACTAGCATGTTCAATGGGAATGCCCGAAGTATTCTCTGTTGTAGATGAAAGTGGAGAGAGAAACACTACAGTCACGGTTAATGAAACTTCGTCCGAAAGTGGTGGAATTGAAAAGTTGCAATTTTACAAAAATTCTTGTGCGTCAACTTTGAGCCAGGCAGAGGTAGAACGTCATCAAGTTCCAGAGGAAATGGAAGATGCTGATATTCAACTTTCTTTTCATGAATGGACCACAAAAGTGGGCAAAGAAACAAGCTTTCAACCCAAACCCGATACACAAGCTGAAGCAACTAATTCAGAAGATGCACTTTCATCAGAAAACTCAACAAGCGTGGATGAGGGAGAGAATGAAATTGAAGAGAACTTACTTAAGATGGAAGATATGAAAACATCACTTCCTCCGGATAGAAGTGATGAGAAAGCAGGCCAAGCTGATGTTGGCATGGAAGAGTTTGTAGGGAGGAAAAAGTTTGTCACCAGAATGGAATCTGATCCTGAACATCCAGAAAGTAACTTGTTCTGTCGTATGGAAGATAAAGTAAAGTCCTCCGACCAGTTTGAAGATGAGAGACAAAAAGTGTCAGTTCAGGGGGTCAATGTAAGGGCTGAGAAAGGAAGTGGATTGGAATCATCTCGGCCAACTATTTCAGAAAGGAGACCGAAGAGCGAGGAATTTTCCCATGGGGTCAATGCAAATCAGGCCACAGAAAGAAAGGAAAAGATTGTAAACAAGAGCCACACATCTAAAGGAAAAGAGAGTGAGAGAGTGAGGAGTGAAGGAGAATTTGAGAATGATATTCTTCGAAAATTGGAAGAAGAGAGGGAAAGGGAAAGAGAGAGAGAAAAGGATAGAATGCCTATTGACAGAATTGCTCTTGAACCACGTGATAGAGTAGGTGCCGAAGCTCGTGAAAGGGTGGAAAGGGCTGCTCTGGAGAGGATGACTGCTGATGCCCGACAAAGAGCATTGGCAGAGGCACGTGAAAGATTGGAAAAGGCATGTGCAGAGGCGAGAGAAAATTCATTGGCTGGAAAGGCAACTATCGAGGCAAGGGTAAAGGCAGAGCGTGCAGCCGTAGAAAGAGCAACTGCAGAGGCCAGGGAGCGAGCTGCAGAGAAAGCCATGTCTGACAGGACTTCCTTTGGGGTGAGAGAGAGAATGGAAAGATCTGTTTCTGACAAGTTCTCTGCTTCTTCCAGAAATAATGAAATGAGACAGAAGTCTTCATCTTCTGGTCAGCCCAGCTTACAATCTCAGAGCTTTGGGTCTTCCATTGCTTCAAGATATTCCTACTACACGGCTTATGATGAGAGGAATGAGGGTGTTGATGGTGAATCACCTCAAAGGTGTAAAGCCAGATTAGAGAGGCATCAAAGAACAGCAGAACGTGCAGCAAAAGCTTTGGCAGAAAAAAATATGCGTGATCTTCTTGCTCAAAGGGAGCAAGCTGAGAGAAATAGATTGGCTGAGACATTGGATGCTGATGTTAGGAGATGGTCAAGTGGGAAGGAAGGGAACTTGCGTGCCTTGCTTTCTACATTGCAATATATCCTTGGACCTGATAGTGGTTGGCAGCCCATTCCCTTAACGGAAGTTATTACTGCCGCTGCTGTAAAGAGAGCTTACAGGAAAGCCACTCTGTGTGTTCATCCAGACAAATTACAACAACGGGGTGCAAGTATTCAGCAAAAGTATATATGTGAGAAGGTCTTTGATCTACTAAAGGAAGCTTGGAACAAATTCAACTCAGAAGAGCGGTAG 4362 42.48 MDNLSHSRLPNRGSTSVSKKICNGSNGGGSFVAQTIYDDVYGGPPKFGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVDESEVFFDARSSAFDYAEVFGGFDGLDFAVSYEELVGPSKAVDDGSSDEAWTPAGTESLSDCSDHSGNSHCMSNEDSNQSFGGNTDFCISYNEVNREGNGNISNGKIHVTQLEMLPGFSYLVDEANPSPKETDDDPSLQTNDDSYLNIDFDTGKVKTKHPRNTMPPPVDSNGSGPLFEDSLISQNGYSRGVCRSHEDFITVSEISLRTEPSQVPPPSRLPPKFAAKKGDDTKMALNGEEAASEIISDDHSLPLFDVEVDASSSAAASAAAMKEAMEKAQAQLQNAKDLWERKKEGAHGRMRLDAKNDMGEKERILTKIPNRFKSLADERVQGIGEIRDHMINFPARDERQKDEKATEVCSTPYGGEELLTVAVKTVPIRSGSRFLVSDNYDCCSEWKDATEFFELARTDISGKEFESVNNNEISNFVTGQMGTETIIEAWENNKDRDKKGKPFHMAHALNEEVKNLGNMVHVKEEDKIKLKPNKNETKQKEQVKLKIHPGVCDLEANDRKFGVAEELVEVKKQMSDASELEKHEKPIEFRQLDSELKVKQPVLPMDIEQEKKKVVKRKQNGNILKDSHRKENNTNKAEEAIENEKREKLFTEASEREKLEQKMMMFLEQQENKKRLNLVLEDGNFKGQMDRENQLEGVHEKEDHGKKGKEAAKVGVSERSKLAHEREDDDDKCPKDFQYREKCEKGIEDSFQRLNIEGMPSDVGKCKVTQLLVEDSQYSADLKGTSMEHDELERVKDEHKVNSTIGSQAYVEVTDLGISAPAFQMNDDKNHLPTGLACSMGMPEVFSVVDESGERNTTVTVNETSSESGGIEKLQFYKNSCASTLSQAEVERHQVPEEMEDADIQLSFHEWTTKVGKETSFQPKPDTQAEATNSEDALSSENSTSVDEGENEIEENLLKMEDMKTSLPPDRSDEKAGQADVGMEEFVGRKKFVTRMESDPEHPESNLFCRMEDKVKSSDQFEDERQKVSVQGVNVRAEKGSGLESSRPTISERRPKSEEFSHGVNANQATERKEKIVNKSHTSKGKESERVRSEGEFENDILRKLEEEREREREREKDRMPIDRIALEPRDRVGAEARERVERAALERMTADARQRALAEARERLEKACAEARENSLAGKATIEARVKAERAAVERATAEARERAAEKAMSDRTSFGVRERMERSVSDKFSASSRNNEMRQKSSSSGQPSLQSQSFGSSIASRYSYYTAYDERNEGVDGESPQRCKARLERHQRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVRRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITAAAVKRAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 74980031 74985859 + Tan0007857.1 Tan03g1999 747503

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1999 1453 MobiDBLite consensus disorder prediction 984 1015 - -
Tan03g1999 1453 MobiDBLite consensus disorder prediction 657 677 - -
Tan03g1999 1453 MobiDBLite consensus disorder prediction 1230 1288 - -
Tan03g1999 1453 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 1453 - GO:0005737(PANTHER)|GO:0030276(PANTHER)|GO:0031982(PANTHER)|GO:0043231(PANTHER)|GO:0072318(PANTHER)|GO:0072583(PANTHER)
Tan03g1999 1453 MobiDBLite consensus disorder prediction 1230 1260 - -
Tan03g1999 1453 ProSiteProfiles dnaJ domain profile. 1389 1453 IPR001623 -
Tan03g1999 1453 MobiDBLite consensus disorder prediction 1261 1288 - -
Tan03g1999 1453 FunFam Auxilin-related protein 1 1324 1453 - -
Tan03g1999 1453 Gene3D DnaJ domain 1326 1453 IPR036869 -
Tan03g1999 1453 MobiDBLite consensus disorder prediction 1100 1127 - -
Tan03g1999 1453 MobiDBLite consensus disorder prediction 948 1015 - -
Tan03g1999 1453 Coils Coil 1318 1353 - -
Tan03g1999 1453 Coils Coil 350 374 - -
Tan03g1999 1453 MobiDBLite consensus disorder prediction 1 21 - -
Tan03g1999 1453 Coils Coil 1212 1232 - -
Tan03g1999 1453 MobiDBLite consensus disorder prediction 122 159 - -
Tan03g1999 1453 Coils Coil 1183 1207 - -
Tan03g1999 1453 MobiDBLite consensus disorder prediction 133 159 - -
Tan03g1999 1453 Coils Coil 659 679 - -
Tan03g1999 1453 MobiDBLite consensus disorder prediction 948 978 - -
Tan03g1999 1453 SUPERFAMILY Chaperone J-domain 1310 1452 IPR036869 -
Tan03g1999 1453 MobiDBLite consensus disorder prediction 1050 1127 - -
Tan03g1999 1453 MobiDBLite consensus disorder prediction 204 256 - -
Tan03g1999 1453 MobiDBLite consensus disorder prediction 726 765 - -
Tan03g1999 1453 Coils Coil 1127 1147 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1999 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1999 Tan-Chr3:74980031 Tan11g1244 Tan-Chr11:10583632 3.70E-45 dispersed
Tan01g4890 Tan-Chr1:114842191 Tan03g1999 Tan-Chr3:74980031 3.90E-30 transposed
Tan03g0233 Tan-Chr3:35121177 Tan03g1999 Tan-Chr3:74980031 1.10E-56 transposed
Tan01g4952 Tan-Chr1:115310625 Tan03g1999 Tan-Chr3:74980031 7.40E-70 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g999 Blo04g00910 Blo16g00053 . . Bpe15g00422 Bpe13g00437 . . . . . Cma07g00477 Car03g00673 Car07g00420 Sed14g1132 Cpe19g00817 Cpe10g00623 Bhi03g01324 Tan03g1999 Cmetu08g1509 . . . . Cla01g01920 . . . Clacu01g2027 Cmu01g1902 . . Cone12ag0778 Cone6ag1638 Cone9ag1558 Lsi01g00666 . . Cme08g00860 . . Bda11g01857 . . . Bma03g00985 Bma06g00115 . . Cmo07g00477 . . . . . . . . . . . . . . . . . . . . . Csa06g03256 Chy02g00633 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004571 1 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 2 41