Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2030 ATGGCTAAGCTTGTAAGTCTTGTGTTTGTTCTTACCCTTCTTGCCTTTGCTCCACTCTGTTTGTCTAGCAGGATTAGTGGGCATGGGTCTCTGTACCCTCAATATTATGACCAGTCTTGCCCCAAAGCAAAGGAAATAGTGAAATCCATTGTGGCAAAGGCTTTTGCCAGAGAAGCTCGTCTTGCTGCTTCTATCCTTAGACTTCACTTCCATGACTGTTTTGTTCAGGGGTGTGATGCATCTATACTACTGGATAGCAGTGGGAGCATTAGGAGTGAAAAGAATTCAAACCCAAATAGGAACTCAGCTAGAGGGTTTGAGGTGATTGATGAGATCAAATCTGCATTGGAGAAAGAGTGCCCACAAACTGTTTCTTGTGCTGATATCTTGGCTTTGGCTGCAAGAGATTCTACTGTCATTACGGGTGGACCCTTTTGGGAGGTTCCATTGGGAAGGAAGGACTCAAGAACTGCGAGTTTGAGTGGCTCAAACAACAACATTCCAGCTCCAAACAACACTTTCAAAACCATTCTCAATAGATTTCAAAACCAAGGCCTTGATATTGTTGACCTTGTTGCCTTATCTGGATCCCACACCATCGGAAATTCAAGGTGCACCAGTTTCAGGCAGAGGTTGTACAACAATAACGGCAACGGACAGCCGGACAAAACCATTCTGCCGTCGTACGCGGCGGAGCTCCGGAGCCGGTGCCCAAGATCCGGAGGCGACAACAACCTGTTTTTCCTGGACTTGGTCAGCCCAACGAAATTCGACAACAGCTACTTCAAGAACATAGTTGATAAGAAAGGGCTTCTGAACTCAGACCAAGTTCTGTTCACCCAAAACGACGCGTCCGCCGCTTTGGTAAAGAAATATGCCGACAACGGCGACCTGTTCTTCGACCAATTCGCGAAATCTATGATCAAAATGGGAAATATTTCCCCATTGACGGGCTCCAATGGAGAGATCAGGAAGACTTGCAGGAAGATCAACAATTAA 999 46.15 MAKLVSLVFVLTLLAFAPLCLSSRISGHGSLYPQYYDQSCPKAKEIVKSIVAKAFAREARLAASILRLHFHDCFVQGCDASILLDSSGSIRSEKNSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVITGGPFWEVPLGRKDSRTASLSGSNNNIPAPNNTFKTILNRFQNQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNNNGNGQPDKTILPSYAAELRSRCPRSGGDNNLFFLDLVSPTKFDNSYFKNIVDKKGLLNSDQVLFTQNDASAALVKKYADNGDLFFDQFAKSMIKMGNISPLTGSNGEIRKTCRKINN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 75315168 75317434 + Tan0005172.1 Tan03g2030 747534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2030 332 FunFam Peroxidase 168 310 - -
Tan03g2030 332 FunFam Peroxidase 34 176 - -
Tan03g2030 332 ProSiteProfiles Plant heme peroxidase family profile. 30 331 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 CDD secretory_peroxidase 31 330 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan03g2030 332 Gene3D - 35 331 - -
Tan03g2030 332 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601(InterPro)
Tan03g2030 332 SUPERFAMILY Heme-dependent peroxidases 31 331 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 Pfam Peroxidase 47 295 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Tan03g2030 332 Gene3D Peroxidase, domain 2 168 311 - -
Tan03g2030 332 PANTHER PEROXIDASE 72-RELATED 10 330 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g2030 332 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1385 Tan-Chr1:13775572 Tan03g2030 Tan-Chr3:75315168 1.00E-75 dispersed
Tan03g2030 Tan-Chr3:75315168 Tan11g0318 Tan-Chr11:2494991 1.80E-88 dispersed
Tan05g3091 Tan-Chr5:83069977 Tan03g2030 Tan-Chr3:75315168 4.60E-52 dispersed
Tan06g0683 Tan-Chr6:5172561 Tan03g2030 Tan-Chr3:75315168 7.00E-53 dispersed
Tan06g2612 Tan-Chr6:78687832 Tan03g2030 Tan-Chr3:75315168 4.50E-68 dispersed
Tan04g0935 Tan-Chr4:8233270 Tan03g2030 Tan-Chr3:75315168 3.30E-77 transposed
Tan05g1729 Tan-Chr5:53217442 Tan03g2030 Tan-Chr3:75315168 2.30E-59 transposed
Tan07g0204 Tan-Chr7:4640087 Tan03g2030 Tan-Chr3:75315168 3.40E-71 transposed
Tan09g1405 Tan-Chr9:66177062 Tan03g2030 Tan-Chr3:75315168 2.10E-68 transposed
Tan01g1261 Tan-Chr1:12218506 Tan03g2030 Tan-Chr3:75315168 2.70E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2030 K00430 - csv:101204648 573.163