Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan03g2035 | ATGGAATTAGTTTTGGTTTTGGTTTTGGGGTTTTGGGTTTTGTTTGTGAGTGTTGTTTTTGGTTGGTTTTGGTTGAAGAAGATGAAGATGAAGATGAAGAAGAAGAAGCATATTCAAATTAAGGATGGAATTCCAAAAGGGAACCTGGGTTGGCCTCTCCTTGGTGAAACTCTTCAATTCATTGCTTCTGGCTACTCTTCTCGTCCTGTCACCTTCATGGACAAACGCAAATCTCTGTACGGGAAGGTGTTCAAGACCAACATTTTGGGGAGACCGATCATAGTGTCCACTGATTCAGAAGTGAACAAAGTGGTTTTACAGAACCATGGCAACATTTTTGTTCCAGCTTACCCTAAATCAATAACTGAATTACTTGGTTCATTTTCAATTCTTCAAATGAATGGAAATGTTCAGAAAAAAGTTCATACAATCATCGGAGCTTTCCTCAGATCCCCAAACCTCAAAGCCCAAATCACTAGAGATATTCAAAACACTGTTAAACTAAGACTTGCCAATTGGAATATCTCCCAATTGGTCTATGTCCAAACTGAAACCAAACAGATCACATTTGAAGTATTGGTGAAGGTGTTGATGAGTGTGGGACCCGGTGAAGATTTGAAGATTTTGAAAAGGGAATTCGAAGAGTTCATCAAAGGCTTGATTTGTATACCCGTTAAACTACCTGGAACTAGGCTATATAAATCTTTGAAGGCTCGAGAGAAGCTGTTGAAAATAGTGAGTAAAATTGTGGAAGAGAGAAAATTGAGGGCGGGGGAGAAGGTTGCACCGAGAGATGCGGTGGACGTGCTCTTACAGGATCACGATGAAATCCAAGGCCTGCCGTTGGATTTCATCAGCAGTCACATCATAGAACTCATGATCCCCGGCGAGGAGACGGTGCCGATGGCGATGACCCTCGCCGTCAAATTTCTCAGTGACTGCCCCGTCGCTCTTGCTCAAATGATGGAAGAGAATATGGAACTGAAGAAGCAGAAGGATGATTCTGGCCAGGAGTATACGTGGACAGATTACATGTCTCTCCTATTTACTCAGAATGTGATTAGTGAAACGTTAAGAATGGCTAATATCATCAATGGGGTTTGGAGAAGAGCTCAAAAAGATGTGAAAATCAAAGGTTATTTAATACCACAAGGATGGTGCGTTTTGGCATCGTTTATTTCGGTTCATATGAATGAAAATAACTATGCAAACCCACATCAGTTTGATCCATGGAGATGGGAGGAAATTGGGTCTGGAGCGAACAACCATAACTTTACACCGTTTGGAGGGGGACAGAGGCTATGTCCCGGCATCGAACTCGCTAGGCTCGAAATCTCAATTTTTCTTCATCATCTTGTCACAACCTACAAATGGGGAGCTGAAAAGGATGAAATCATCCATTTTCCGACAGTGAAGATGAGAAGGAAGCTGCCAATCGCTATCGCAACCTTGAGCTCTTGA | 1461 | 42.16 | MELVLVLVLGFWVLFVSVVFGWFWLKKMKMKMKKKKHIQIKDGIPKGNLGWPLLGETLQFIASGYSSRPVTFMDKRKSLYGKVFKTNILGRPIIVSTDSEVNKVVLQNHGNIFVPAYPKSITELLGSFSILQMNGNVQKKVHTIIGAFLRSPNLKAQITRDIQNTVKLRLANWNISQLVYVQTETKQITFEVLVKVLMSVGPGEDLKILKREFEEFIKGLICIPVKLPGTRLYKSLKAREKLLKIVSKIVEERKLRAGEKVAPRDAVDVLLQDHDEIQGLPLDFISSHIIELMIPGEETVPMAMTLAVKFLSDCPVALAQMMEENMELKKQKDDSGQEYTWTDYMSLLFTQNVISETLRMANIINGVWRRAQKDVKIKGYLIPQGWCVLASFISVHMNENNYANPHQFDPWRWEEIGSGANNHNFTPFGGGQRLCPGIELARLEISIFLHHLVTTYKWGAEKDEIIHFPTVKMRRKLPIAIATLSS | 486 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 75339534 | 75343918 | + | Tan0009674.1 | Tan03g2035 | 747539 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan03g2035 | 486 | PRINTS | E-class P450 group I signature | 284 | 301 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g2035 | 486 | PRINTS | E-class P450 group I signature | 391 | 415 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g2035 | 486 | PRINTS | E-class P450 group I signature | 435 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g2035 | 486 | PRINTS | E-class P450 group I signature | 77 | 96 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g2035 | 486 | PRINTS | E-class P450 group I signature | 425 | 435 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g2035 | 486 | Gene3D | Cytochrome P450 | 33 | 484 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g2035 | 486 | SUPERFAMILY | Cytochrome P450 | 42 | 474 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g2035 | 486 | PRINTS | P450 superfamily signature | 352 | 363 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g2035 | 486 | PRINTS | P450 superfamily signature | 435 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g2035 | 486 | PRINTS | P450 superfamily signature | 150 | 163 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g2035 | 486 | PRINTS | P450 superfamily signature | 426 | 435 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g2035 | 486 | PANTHER | CYTOCHROME P450 26 | 44 | 460 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Tan03g2035 | 486 | Coils | Coil | 318 | 338 | - | - | |
| Tan03g2035 | 486 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 428 | 437 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan03g2035 | 486 | CDD | CYP90-like | 76 | 481 | - | - | |
| Tan03g2035 | 486 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 32 | 484 | - | - | |
| Tan03g2035 | 486 | Pfam | Cytochrome P450 | 45 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan03g2035 | Tan-Chr3:75339534 | Tan04g2750 | Tan-Chr4:86931863 | 6.00E-141 | dispersed | |
| Tan03g2035 | Tan-Chr3:75339534 | Tan06g0181 | Tan-Chr6:1603976 | 4.00E-145 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan03g2035 | K12637 | - | csv:101203911 | 797.734 |