Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2054 ATGAGGCTTCTTCTTGTCTTATTCTTTGCGCTGCTGCTGCTCTGCGGTGGTTTCTTTTCCTCCTCCGCCGACCCCAGCGCCCAAACCCTACCGGAGATTCAGGCATTGATGTCTTTTAAGCTTAACCTTCATGATCCTCTTGCTGCATTGACTGGTTGGGATTCTTCCACCCCTTTGGCGCCTTGTGACTGGCGGGGTGTTGTCTGTACTAGTAATCGAGTCACCGAGCTTCGTTTGCCACGTCTTCAACTCTCCGGCCGATTGACTGATCAGTTGGCTAACTTGCCCATGCTTCGGAAGTTGAGTATTCGATCCAATTTCTTCAATGGTACGATTCCCTCTTCTCTGTCCAAATGTGCGTTTCTGCGTTCCATTTTCTTGCAGTACAACTCGTTTTCCGGTGGCCTTCCCGCCGAGTTTGGGAACTTGACCAATCTCCATATTCTGAACGTGGCGGAGAATCGCCTCTCCGGCGTCATCCCCGCCGACCTTCCGAACAGCCTGAAATATCTCGATCTTTCGTCGAACGCATTCTCCGGTCAGATTCCGAGGAGTGTTCTGAACATGACGCAGCTTCAGGTTGTGAATCTATCTTTCAACCGGCTAGGCGGGGAGATTCCGGCGAGCTTTGGTGCGCTTCAGAAGCTTCAACATCTCTGGCTCGACCATAATGTGTTAGAAGGGACGTTGCCTTCGGCTCTTGCGAATTGTTCTTCTCTCGTTCATTTGAGCGTTGAGGGAAATGCGCTCCAAGGCGTAATCCCGGCCGCCATTGGAGCTCTTCCGAATCTTCAAGTTATTTCGCTCTCGCAGAATAGTCTCACTGGTTCAGTTCCTTACTCTATGTTTTGCAATGTCTCGACGCATGCGCCGTCTCTTCGGATCGTTCAACTTGGATTTAATGCGTTCACGGACATTGTCAAACCTCAGACAGCGACGTGTTTTAGTGCTTTACAGGTCCTCGATATCCAACACAATCAGATAAGGGGCGAGTTCCCCTTGTGGTTAACGGGCGTTTCGACTTTGACAGTCTTGGATATTTCTGTTAATAATTTCTCCGGCGAGATTCCGCCTGGGATTGGGAATCTTTCGGGATTGCAAGAGCTTAAAATGGCGAACAATTTCTTCCACGGGGCGATTCCGTTAGAAATCAATAACTGCTCCTCGATTTCTGTTATTGATTTTGAAGGGAATCGCTTAACCGGAGAGATTCCGCCGTTCTTGGGCTATATGAGAGGTTTGAAACGGTTGTCTCTCGGTGGAAATCGTTTTTCCGGCACTACTCCGGCCAGTTTGGGAAATCTGTTGGAGCTTGAAATCTTGAATTTAGCTGACAATGGCTTGAATGGAACCCTTCCTCTTGAGCTAATGGGGCTTGGGAATTTAACGTCAATGGAGCTTGGTGGGAACGATTTTACTGGCGAGGTTCCAGTTGGTATTGGGAATCTCAGTCGTCTTGAGATTTTGAATCTCAGTGCTAACAGTCTTTCTGGGAAGATTCCGTCCAGTCTTGGCAGTCTCTTCAAGCTAACGACTCTGGACTTGAGCAAACAGAATCTTTCTGGGGAGTTGCCGTTTGAGCTCTCTGGTTTGCCTAATTTGCAGGTGATTGCTCTACAGGAGAACAAGCTATCTGGGAATGTTCCTGAAGGATTCAGTAGTTTGGTGGGTTTGCGCTATTTGAATCTAAGCTCAAATGGATTTTCCGGTCAAATCCCTTCTAATTATGGGTTTCTTAGATCGCTTGTTTCACTGTCATTGTCAAAAAATTACATTTCTGGGTCGATCCCTTCAGAGCTGGGGAACTGCTCTGATCTTGAAAGTTTGGAGGTCCGTTCAAATACTCTTTCAGGGCATATTCCGGCGGATCTTTCTCGTTTATCTCATTTGCAAGAGCTCGATTTGGGTAGGAATAATTTGACTGGCGAAATCCCTGAAGAGATCTCTAGTTGCTCGTCTTTAGAATCACTCCTTCTGGACTCAAATCATCTTTCCGGTATCATACCAGAGTCCTTGTCGGAGCTCTTGAACTTAACCAAGCTCGACCTCTCATCCAACAATTTGAGTGGTGCTATTCCTACTAATCTTAGCTCCATTACTGGATTGGTGAGCTTAAACGTCTCAAGTAATGATTTAGAAGGCGAAATCCCAGCCTCTTTAGGCTCTAGATTCAACAACTCATCTGTGTTCGCTAATAATTCTGCCTTATGCGGGAAACCACTGGCTCGGAATTGTAAGGACACGGAGAAAAAGGATAGAATGAAGAGATTGATACTATTCATTGCAGTGGCCGCCAGTGGAGCTTGCCTCTTGACCTTGTGTTGCTGCTTCTACATTTTCAGCCTGTTGAGATGGCGGAAGAGGCTCAAAGAGAGGGCGTCCGGAGAGAAGAAAACAAGTCCGGCAAGGGTTAGCTCTGCAGCAAGTGGTGGCCGAGGAAGCACAGAAAATGGAGGGCCAAAGCTTGTGATGTTCAACAACAAGATTACTCTAGCGGAAACAATCGAGGCAACAAGGCAATTCGATGAAGAAAATGTTCTAAGCAGAACCCGTTATGGATTGGTTTTCAAAGCTTGTTACAATGATGGCATGGTGCTCTCAATCCGCCGTCTCTCAAACGGTTCATTGGACGAAAACCTGTTCAGAAAAGAAGCTGAAGCATTGGGAAAAGTTAGGCACCGCAATCTGACTGTTCTTCGTGGCTACTACGCTGGCCCTCCTGATATGCGGCTGTTAGTTTACGATTACATGCCTAATGGAAACCTTGCCACTCTCCTTCAGGAAGCATCTCACCAAGATGGCCATGTTCTGAATTGGCCAATGCGGCATCTCATTGCTCTAGGCATCGCCCGTGGCCTAGCCTTTCTTCATTCATCTTCCATTATCCATGGAGATGTCAAGCCACAAAGCGTTCTTTTCGATGCCGATTTCGAAGCTCATTTGTCTGATTTCGGGCTAGACCGACTAACCATTGCAGCCTCCGCAGAAGCATCCACGTCTACCTTGGTGGGCACTCTGGGCTACATTGCCCCAGAAGCAGTGTTGACAGGGGAGGCAACAAAGGAATCTGATGTCTACAGCTTCGGCATTGTTTTGCTAGAGATTCTAACGGGGAAGAAACCAGTGATGTTCACAGAAGATGAAAACATTGTCAAATGGGTGAAAAAGCAATTGCAGAGAGGCCAAATTACTGAGCTCCTAGAACCAGGCTTGCTCGAGCTGGATCCTGAATCCTCAGAATGGGAAGAGTTTTTGCTGGGTGTGAAAGTTGGGTTGCTCTGTACTGCACCGGATCCTCGTGACCGGCCGACAATGTCCGATATTGTTTTCATGCTCGAAGGATGCCGAGTTGGACCAGACATCCCCTCCTCCGCCGATCCCACCTCCCAACCGTCACCGGTGTAA 3405 47.78 MRLLLVLFFALLLLCGGFFSSSADPSAQTLPEIQALMSFKLNLHDPLAALTGWDSSTPLAPCDWRGVVCTSNRVTELRLPRLQLSGRLTDQLANLPMLRKLSIRSNFFNGTIPSSLSKCAFLRSIFLQYNSFSGGLPAEFGNLTNLHILNVAENRLSGVIPADLPNSLKYLDLSSNAFSGQIPRSVLNMTQLQVVNLSFNRLGGEIPASFGALQKLQHLWLDHNVLEGTLPSALANCSSLVHLSVEGNALQGVIPAAIGALPNLQVISLSQNSLTGSVPYSMFCNVSTHAPSLRIVQLGFNAFTDIVKPQTATCFSALQVLDIQHNQIRGEFPLWLTGVSTLTVLDISVNNFSGEIPPGIGNLSGLQELKMANNFFHGAIPLEINNCSSISVIDFEGNRLTGEIPPFLGYMRGLKRLSLGGNRFSGTTPASLGNLLELEILNLADNGLNGTLPLELMGLGNLTSMELGGNDFTGEVPVGIGNLSRLEILNLSANSLSGKIPSSLGSLFKLTTLDLSKQNLSGELPFELSGLPNLQVIALQENKLSGNVPEGFSSLVGLRYLNLSSNGFSGQIPSNYGFLRSLVSLSLSKNYISGSIPSELGNCSDLESLEVRSNTLSGHIPADLSRLSHLQELDLGRNNLTGEIPEEISSCSSLESLLLDSNHLSGIIPESLSELLNLTKLDLSSNNLSGAIPTNLSSITGLVSLNVSSNDLEGEIPASLGSRFNNSSVFANNSALCGKPLARNCKDTEKKDRMKRLILFIAVAASGACLLTLCCCFYIFSLLRWRKRLKERASGEKKTSPARVSSAASGGRGSTENGGPKLVMFNNKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLSNGSLDENLFRKEAEALGKVRHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHSSSIIHGDVKPQSVLFDADFEAHLSDFGLDRLTIAASAEASTSTLVGTLGYIAPEAVLTGEATKESDVYSFGIVLLEILTGKKPVMFTEDENIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPRDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPV 1134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 75515011 75518756 + Tan0009815.1 Tan03g2054 747558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2054 1134 ProSiteProfiles Protein kinase domain profile. 841 1121 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2054 1134 Gene3D Ribonuclease Inhibitor 165 253 IPR032675 -
Tan03g2054 1134 FunFam Piriformospora indica-insensitive protein 2 356 454 - -
Tan03g2054 1134 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Tan03g2054 1134 FunFam Putative LRR receptor-like serine/threonine-protein kinase 805 916 - -
Tan03g2054 1134 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 188 - -
Tan03g2054 1134 Pfam Leucine rich repeat 529 567 IPR001611 GO:0005515(InterPro)
Tan03g2054 1134 Pfam Leucine rich repeat 412 472 IPR001611 GO:0005515(InterPro)
Tan03g2054 1134 Pfam Leucine rich repeat 580 640 IPR001611 GO:0005515(InterPro)
Tan03g2054 1134 Pfam Leucine rich repeat 191 250 IPR001611 GO:0005515(InterPro)
Tan03g2054 1134 Pfam Leucine rich repeat 653 712 IPR001611 GO:0005515(InterPro)
Tan03g2054 1134 MobiDBLite consensus disorder prediction 794 821 - -
Tan03g2054 1134 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 207 307 - -
Tan03g2054 1134 Pfam Protein kinase domain 851 1109 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2054 1134 Gene3D Phosphorylase Kinase; domain 1 814 916 - -
Tan03g2054 1134 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 467 749 - -
Tan03g2054 1134 MobiDBLite consensus disorder prediction 799 813 - -
Tan03g2054 1134 Gene3D Ribonuclease Inhibitor 31 142 IPR032675 -
Tan03g2054 1134 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 917 1120 - -
Tan03g2054 1134 SUPERFAMILY Protein kinase-like (PK-like) 822 1122 IPR011009 -
Tan03g2054 1134 SUPERFAMILY L domain-like 362 473 - -
Tan03g2054 1134 Gene3D Ribonuclease Inhibitor 357 456 IPR032675 -
Tan03g2054 1134 Gene3D Ribonuclease Inhibitor 254 356 IPR032675 -
Tan03g2054 1134 Pfam Leucine Rich Repeat 318 337 IPR001611 GO:0005515(InterPro)
Tan03g2054 1134 Pfam Leucine Rich Repeat 342 363 IPR001611 GO:0005515(InterPro)
Tan03g2054 1134 Pfam Leucine Rich Repeat 167 188 IPR001611 GO:0005515(InterPro)
Tan03g2054 1134 Pfam Leucine Rich Repeat 485 507 IPR001611 GO:0005515(InterPro)
Tan03g2054 1134 Pfam Leucine Rich Repeat 122 143 IPR001611 GO:0005515(InterPro)
Tan03g2054 1134 Pfam Leucine Rich Repeat 98 119 IPR001611 GO:0005515(InterPro)
Tan03g2054 1134 SMART LRR_typ_2 143 167 IPR003591 -
Tan03g2054 1134 SMART LRR_typ_2 531 554 IPR003591 -
Tan03g2054 1134 SMART LRR_typ_2 213 236 IPR003591 -
Tan03g2054 1134 SMART LRR_typ_2 189 212 IPR003591 -
Tan03g2054 1134 SMART LRR_typ_2 483 507 IPR003591 -
Tan03g2054 1134 SMART LRR_typ_2 579 603 IPR003591 -
Tan03g2054 1134 SMART LRR_typ_2 411 434 IPR003591 -
Tan03g2054 1134 SMART LRR_typ_2 95 119 IPR003591 -
Tan03g2054 1134 SMART LRR_typ_2 675 699 IPR003591 -
Tan03g2054 1134 SMART LRR_typ_2 261 285 IPR003591 -
Tan03g2054 1134 SMART LRR_typ_2 627 651 IPR003591 -
Tan03g2054 1134 SMART LRR_typ_2 652 674 IPR003591 -
Tan03g2054 1134 SUPERFAMILY RNI-like 70 399 - -
Tan03g2054 1134 Gene3D Transferase(Phosphotransferase) domain 1 917 1120 - -
Tan03g2054 1134 Gene3D Ribonuclease Inhibitor 457 754 IPR032675 -
Tan03g2054 1134 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 122 209 - -
Tan03g2054 1134 SUPERFAMILY L domain-like 489 741 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2054 Tan-Chr3:75515011 Tan01g0823 Tan-Chr1:7959019 5.10E-50 dispersed
Tan03g2054 Tan-Chr3:75515011 Tan02g2519 Tan-Chr2:93824280 5.30E-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67349 PF00069 Pkinase 7.10E-35 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2054 - - - 0.0