Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g2084 | ATGGAGCAGTGGAAGACTGGAGATTTCTCTCAATCTATTGTAACAGCTGATTTAGTTCCTTCCTCGTCTCTTCCGCCTCAGCCTCTCTCTTTGCCCTCCAGTCGCCACCATAACAACCAGCTTCCTGAATCCAGGTTAAGAACAGATACGGAAGTAAAAGATCCAATAGCAGTGAGAAAAATTCAAAAGGCTGATCGTGAAAAGTTGAGGAGAGACAGGCTGAATGAACACTTTCTCGAGCTAGGAAACACATTAGATCCAGATAGGCCCAAAAATGACAAGGCTACCATCCTCACAGACACCATCCAAATGCTGAAGGATTTAACTGCCGAAGTCAATAGATTGAAGGCTGACTACGAAGCTCTTTCTGAAGAATCACGTGAGCTAACCCAGGAAAAGAATGAGCTTAGAGAAGAGAAGGCTTCATTAAAATCAGATATTGAAAATCTAAATGCTCAGTATCAGCAAAGACTGAGGGTAATGTTTCCCTGGGCTACAATGGATCCTTCGGTGGTCATGGGGCCCCCATATTCATACCCAGTTCCTGTTCCCGTTCCCCCAGGACCAATTCCAATGCATCCGTCATTGCAGCCCTTCACCTTCTTTGGAAATCAGAATCCCGGTGCTATTCCTAACCCTTGTTCAACATTTGTCCCATATACTGCTGCTGCCAATCATCCGATTGAACAGCCCTCTGCCCAATATGCTTCCAATTCACATATCTCTAGCAAACAAGATTCCAGAAGTAAGTCGTCGGATCAGCATAGGCGTAGTAATGCGGAAAGATGCGACGAATCTAATGATGTAGCAACGGACCTTGAACTCAAGATGCCGGGATCTTCAACACAACAGGTGAGTTTATTGCTTTCAAAACCCCACATAAGTAGTTGTAGATCAAGTAAGAACATTATTGAATATGTTTTCAGGATGCATCCTCTGGAAGTAAGAAAGGTAAGCAGTCGCAGAGGAAAGAAAAAAGTGTTACAGATTGTAGTTCTTCGAGTAGGTTTTCTTCATCCCAAGTTCTTCAAGATAGCTCCTCTAACAGCGTTGGCGACATCCCGAAACAGAACAACTAAATTCATGGTTACTAACCTCATCAAAGTGATTACATTCAAGGTTGTTTCTTCTTCTCCAACCAAATATAGAGTTCAGGAATTTAGGTTCAGAGCTTTAGCTTTAGCTTTTATTCCCACACCAAAATCTGAGCAGTCATTCCTCATTCAGTAA | 1230 | 42.85 | MEQWKTGDFSQSIVTADLVPSSSLPPQPLSLPSSRHHNNQLPESRLRTDTEVKDPIAVRKIQKADREKLRRDRLNEHFLELGNTLDPDRPKNDKATILTDTIQMLKDLTAEVNRLKADYEALSEESRELTQEKNELREEKASLKSDIENLNAQYQQRLRVMFPWATMDPSVVMGPPYSYPVPVPVPPGPIPMHPSLQPFTFFGNQNPGAIPNPCSTFVPYTAAANHPIEQPSAQYASNSHISSKQDSRSKSSDQHRRSNAERCDESNDVATDLELKMPGSSTQQVSLLLSKPHISSCRSSKNIIEYVFRMHPLEVRKVSSRRGKKKVLQIVVLRVGFLHPKFFKIAPLTALATSRNRTTKFMVTNLIKVITFKVVSSSPTKYRVQEFRFRALALAFIPTPKSEQSFLIQ | 409 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 75709675 | 75713232 | - | Tan0006972.2 | Tan03g2084 | 747588 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g2084 | 409 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 59 | 128 | IPR036638 | GO:0046983(InterPro) | |
Tan03g2084 | 409 | Gene3D | - | 57 | 160 | IPR036638 | GO:0046983(InterPro) | |
Tan03g2084 | 409 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 58 | 108 | IPR011598 | GO:0046983(InterPro) | |
Tan03g2084 | 409 | MobiDBLite | consensus disorder prediction | 17 | 47 | - | - | |
Tan03g2084 | 409 | Coils | Coil | 98 | 153 | - | - | |
Tan03g2084 | 409 | CDD | bHLH_AtILR3_like | 63 | 137 | - | - | |
Tan03g2084 | 409 | PANTHER | TRANSCRIPTION FACTOR BHLH121 | 24 | 287 | IPR044579 | GO:0003700(InterPro)|GO:0006879(InterPro) | |
Tan03g2084 | 409 | Pfam | Helix-loop-helix DNA-binding domain | 59 | 109 | IPR011598 | GO:0046983(InterPro) | |
Tan03g2084 | 409 | SMART | finulus | 64 | 114 | IPR011598 | GO:0046983(InterPro) | |
Tan03g2084 | 409 | MobiDBLite | consensus disorder prediction | 17 | 39 | - | - | |
Tan03g2084 | 409 | MobiDBLite | consensus disorder prediction | 233 | 268 | - | - | |
Tan03g2084 | 409 | MobiDBLite | consensus disorder prediction | 246 | 268 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g2084 | Tan-Chr3:75709675 | Tan05g1191 | Tan-Chr5:11789296 | 1.10E-50 | dispersed | |
Tan03g2083 | Tan-Chr3:75709675 | Tan03g2084 | Tan-Chr3:75709675 | 6.60E-131 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27063 | PF00010 | HLH | 8.60E-09 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g2084 | - | - | - | 0.0 |