Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2130 ATGGCGGAGAGTTTAGAGGAGGTCTATCTCCATGGCGATCTCGACCTCAAAATCTTCGAGGCCAGCCAGTTGCCTAATATGGACATTATATCGGAGCGTCTTCGTCGTTGCTTCACAGCCTGTGGTACTCTCGACTACTCTGCCATTAAATCCGTCGGAGCCAACTCCCGTTCCGCCGCCGGTGAAGGGAAGGTCCACCGCGGCCATGGCAAAATCATCACCAGCGATCCATATGTTACCGTCCGGGTCCCTCAAGCCACCGTGGCTCGGACTCGCGTCATAAAGAATTCCCAGAATCCCAATTGGAACGAGCATTTCATTATCCCTCTTGCACAGAAAATGGCCGAATTGGAATTCCAGGTGAAAGACGACGATGTGTTTGGAGCTGAAGTTATGGGGACGGTCAAATTCCCTGCTCAGCGAATTGCCTCCGGTGAGACCATTAGTGGGTGGTTTCCGGTGATTGGCTCAAATGGCAAGCCACCAAAGCCTGGCACTTCACTCCGGATCGAAATGAAGTTCACTTCAGTCGAAAAGAACTCGGTATATCGACATGGCATTGCCGGAGATCCCGAGCATAAGGGTGTGCGGCACACTTATTTTCCTGTCAGGAAAGGGAGCTCCATGAGATTGTACCAAGATGCTCATGTGCCTGATGAGCTGCTGCCGCAGATTGAATTGGATGGAGGGAATGTTTATAGACAAGAGAAATGTTGGGAGGATATTTGCCATGCTATATCAGAGGCTCATCATATGATTTATATTGTCGGATGGTCGGTTTTTCATAAGGTGAGGCTGCTTAGAGAGCCAAGCAGGCCGCTGCCACGAGGCGGGGATTTGACTCTAGGTGAGCTGCTCAAATACAAATCAGAAGAGGGTGTCCGAGTTTTGATGATGGTTTGGGATGATAAGACTTCTCATGATAAGTTCTTCATCAACACGGCAGGATTGATGCAGACACATGATGAGGAAACCCGGAAATTTTTCAAGCATTCTTCGGTTATCTGCGTGCTCTCCCCTCGCTATCCAAGTGGCAAGCTAAGCTATGTGAAGCAAAAGGTTGTAGGGACTGTCTTCACACACCATCAAAAGTGTGTCCTTGTTGATACACAAGGATATGGTAATAATAGAAAGATAACTGCATTTCTTGGAGGTCTTGATCTCTGTGATGGTCGTTATGATACACCTGAGCATCGATTGTTCCGTGACCTTGACACAGTATTTAAGGATGATTTTCACAATCCTACAATTCCTCCCGGAACCAATGCTCCAAGGCAACCATGGCATGACTTGCATTGTCGGATTGATGGGCCAGCTGCATATGACTTGCTTATAAACTTTGAGCAACGTTGGAACAGAGCCACAAGATGGACAGAGTTTGGCTTACGGTGCCGGAGAATTACTCACTGGCATGATGCGTTAATAAAGATAGAGCGCATATCGTGGATAGTAAGCCCTCACGTGACTATCTCAGATGATGGTTCAATGAAGGTTCCAGAGGATGACCCTAAAGTATATGTTTCAAAGGAAGAAGATCCTGGAAACTGGCATGTTCAGATTTTTCGATCCATTGACTCTGGATCAGTTAAAGGATTTCCAAAAGATGTCCATCTTGCCGAGTCACAGAACCTTGTATGTGCAAAAAACTTGGCTGTAGAGAAAAGCATTGAAATGGCATATATCCAGGCTATCAGATCGGCACAACATTTCATTTATATCGAAAATCAGTATTTTATTGGATCATCATATGGATGGCCGGGATATAAAAATGCCGGGGCTGATAATCTTATTCCCATGGAGTTGGCCCTTAAGATTGCTAGCAAAATAAGAGCCAAGGAAAGATTTGTTGTGTATATTATCATACCAATGTGGCCCGAGGGAGATCCAAACAGTGGTCCCATGCAAGAGATTCTTTATTGGCAGGGACAAACAATGCAAATGATGTATGACATTGTTGCAAGTGAACTGAAGTCGTCAGAGCAACCAGATTTGCACCCTCTAGACTATCTAAATTTCTACTGCCTTGGTAAACGGGAAGAAATTCCTGAGAATGGACCAACCACTGACAATGCAACGGTATCTAATTCACTAAAGCATAAACGATTTATGATTTACGTTCATGCCAAGGGGATGATAGTAGATGATGAATATGTAATTATTGGGTCTGCAAATATTAATCAAAGATCTATGGCTGGAACAAAGGACACCGAGATAGCCACGGGCGCCTATCAGCCGCATCATACATGGGCAAAGAATAAGAAACACCCACACGGTCAGATTTATGGGTACAGAATGTCGTTATGGAGCGAGCACCTCGAAATGGTTGATCCATGTTTTGAGGAGCCAGAAACTTTGGAATGTGTAAGAAGAGTCAATGGGATTGCTGAGGATAACTGGAAGAGATTCACGGCCGATGAATTCACGACATTGCAGGGCCATCTTCTCAGGTATCCGTTGCTCGTGGACGTAGACGGGAAAGTCAACCCCCTGCCTGGACATGAAAACTTCCCTGATGTAGGGGGGAAGATAATAGGGTCTCATTCAACTGCAATTCCTGATGTTGTGACCACATAG 2574 45.61 MAESLEEVYLHGDLDLKIFEASQLPNMDIISERLRRCFTACGTLDYSAIKSVGANSRSAAGEGKVHRGHGKIITSDPYVTVRVPQATVARTRVIKNSQNPNWNEHFIIPLAQKMAELEFQVKDDDVFGAEVMGTVKFPAQRIASGETISGWFPVIGSNGKPPKPGTSLRIEMKFTSVEKNSVYRHGIAGDPEHKGVRHTYFPVRKGSSMRLYQDAHVPDELLPQIELDGGNVYRQEKCWEDICHAISEAHHMIYIVGWSVFHKVRLLREPSRPLPRGGDLTLGELLKYKSEEGVRVLMMVWDDKTSHDKFFINTAGLMQTHDEETRKFFKHSSVICVLSPRYPSGKLSYVKQKVVGTVFTHHQKCVLVDTQGYGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTIPPGTNAPRQPWHDLHCRIDGPAAYDLLINFEQRWNRATRWTEFGLRCRRITHWHDALIKIERISWIVSPHVTISDDGSMKVPEDDPKVYVSKEEDPGNWHVQIFRSIDSGSVKGFPKDVHLAESQNLVCAKNLAVEKSIEMAYIQAIRSAQHFIYIENQYFIGSSYGWPGYKNAGADNLIPMELALKIASKIRAKERFVVYIIIPMWPEGDPNSGPMQEILYWQGQTMQMMYDIVASELKSSEQPDLHPLDYLNFYCLGKREEIPENGPTTDNATVSNSLKHKRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGTKDTEIATGAYQPHHTWAKNKKHPHGQIYGYRMSLWSEHLEMVDPCFEEPETLECVRRVNGIAEDNWKRFTADEFTTLQGHLLRYPLLVDVDGKVNPLPGHENFPDVGGKIIGSHSTAIPDVVTT 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 76070034 76076888 + Tan0006582.1 Tan03g2130 747634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2130 857 ProSiteProfiles C2 domain profile. 1 152 IPR000008 -
Tan03g2130 857 PIRSF PLD_plant 1 857 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Tan03g2130 857 SUPERFAMILY Phospholipase D/nuclease 197 461 - -
Tan03g2130 857 Gene3D Endonuclease Chain A 227 466 - -
Tan03g2130 857 SMART C2_3c 13 151 IPR000008 -
Tan03g2130 857 Pfam C2 domain 74 153 IPR000008 -
Tan03g2130 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 702 729 IPR001736 GO:0003824(InterPro)
Tan03g2130 857 CDD C2_plant_PLD 8 175 - -
Tan03g2130 857 PANTHER PHOSPHOLIPASE D 9 844 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Tan03g2130 857 SUPERFAMILY Phospholipase D/nuclease 553 775 - -
Tan03g2130 857 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 175 IPR035892 -
Tan03g2130 857 SMART pld_4 702 729 IPR001736 GO:0003824(InterPro)
Tan03g2130 857 SMART pld_4 357 392 IPR001736 GO:0003824(InterPro)
Tan03g2130 857 Pfam Phospholipase D C terminal 777 846 IPR024632 -
Tan03g2130 857 Pfam Phospholipase D Active site motif 704 729 IPR001736 GO:0003824(InterPro)
Tan03g2130 857 Gene3D C2 domain 11 185 IPR035892 -
Tan03g2130 857 Gene3D Endonuclease Chain A 526 754 - -
Tan03g2130 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 357 392 IPR001736 GO:0003824(InterPro)
Tan03g2130 857 FunFam Phospholipase D delta 229 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2803 Tan-Chr2:96403332 Tan03g2130 Tan-Chr3:76070034 0.00E+00 dispersed
Tan03g2130 Tan-Chr3:76070034 Tan06g2132 Tan-Chr6:70585955 3.30E-267 dispersed
Tan03g2130 Tan-Chr3:76070034 Tan04g2586 Tan-Chr4:85111037 1.50E-195 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2130 K01115 - csv:101217251 1631.31