Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2178 ATGTTGCTGGTTTATTGTTTGTGTTTGAGTTTGTTGTGGGGGAGATCGTTGGCGGCTGCGGCCGGCGGCGATGGCACCACGAGGGAGCTTGATCAGACTCCGACGTGGGCTGTTGCTGGTGTTTGTGCTATTATCATCCTTATTTCTATCGCCTTGGAGAAACTCCTTCATAAAGCTGGAACGTGGCTTACGGAAAAGCATAAGAGAGCTCTTTTTGAAGCTCTGGAGAAGGTTAAAGCTGAGCTGATGATTCTCGGTTTCATTTCACTGCTCCTCACCTTTGGGCAGAACTATATCATTAAAATCTGCATTCCCACAGGGGTTGCAAACACTATGTTACCGTGTGCAGCACCCAAAGGGGACAAAGTGGAAAAAGACTTGGGCGGAGCTGATGAAGGTGAACATCATCGACGACTTCTATACTATGAACGTAGGTTCCTGGCTGCTGCTGGCCCCGTTAGTTGCAAGGATGGTCATGTGCCGCTTATATCTATCTCGGGATTGCATCAGTTGCACTTGTTTATCTTCTTCTTAGCTGTATTTCATGTTGTATACAGTGCTATCACAATGATGCTTGGGAGGCTAAAGATTCGAGGTTGGAAGGCATGGGAGGAGGAGACCTCAACTCACAATTATGAGTTCTCAAATGATAATGCACGATTCAGGCTTACTCATGAAACATCATTTGTGAAAGCCCACACGAGCTTTTGGACAAAACTTCCTGTCTTCTTTTATATTGGATGCTTCTTCCGACAATTTTTCAGGTCTGTCGGTAAGGCTGACTACTTGACGTTACGCAATGGATTCATCGCCGTTCATCTAGCTCCAGGAAGTAAATTTGACTTTCAAAAATATATTAAAAGGTCTCTAGAAGATGACTTCAAGATAATTGTGGGAGTGAGTCCCGTGCTTTGGGCATCATTTGTCGCCTTCTTGCTCATAAACGTTTATGGATGGCAGGCATTGTTTTGGACATCCTTAATCCCTGTGATTATAATCCTGGCTGTTGGAACAAAGCTTCAAGGAGTTATGACAAAAATGGCTCTTGAAATTACAGAAAGACATGCTGTTGTCCAAGGAATTCCTCTTGTTCAGGCATCGGATAAATATTTTTGGTTTGGCAAGCCTCGGCTGGTTCTTTATCTCATCCACTTCGCTTTATTTTCGAATGCATTCCAAATAACATACTTCTTTTGGATTTGGTATTCATTTGGGCTAAATTCCTGCTTCCATACTGATTTCAAGGTCGCAATTATAAAAGTTGGTCTTGGGGTTGGCGTTCTCTGTCTTTGCAGCTATATTACTCTTCCACTGTATGCTCTTGTGACTCAGATGGGTACGCGTATGAAGAAGTCAATCTTTGATGAACAAACATCAAAGGCTCTCAAGAAGTGGCACATGGCTGTTAAGAAGCGACAAGGAAAGTCCCCGACTCGAAAACTGGGGAGCCCGAATGCTTCGCCAATGCATTCATCATCAGGATACACATTGCATCGTTTCAAGACTACAGGTCACTCAAACAGATCATCCATGTATGAGGAGAACGAGGCATCTGATTACGAAGTCGATCCGTTGTCACCTAAAACACCAACTGCAAATTTTTCGGTTAGAGTAGATGGTCGTGATGAACATCAAACTGAAATAATCGAATCCCAGCATTCAGAAAGAAGGAATGAAGATGAATTCTCATTTGCCAAACCTGGACCAACGAAAGGACCATGA 1722 43.5 MLLVYCLCLSLLWGRSLAAAAGGDGTTRELDQTPTWAVAGVCAIIILISIALEKLLHKAGTWLTEKHKRALFEALEKVKAELMILGFISLLLTFGQNYIIKICIPTGVANTMLPCAAPKGDKVEKDLGGADEGEHHRRLLYYERRFLAAAGPVSCKDGHVPLISISGLHQLHLFIFFLAVFHVVYSAITMMLGRLKIRGWKAWEEETSTHNYEFSNDNARFRLTHETSFVKAHTSFWTKLPVFFYIGCFFRQFFRSVGKADYLTLRNGFIAVHLAPGSKFDFQKYIKRSLEDDFKIIVGVSPVLWASFVAFLLINVYGWQALFWTSLIPVIIILAVGTKLQGVMTKMALEITERHAVVQGIPLVQASDKYFWFGKPRLVLYLIHFALFSNAFQITYFFWIWYSFGLNSCFHTDFKVAIIKVGLGVGVLCLCSYITLPLYALVTQMGTRMKKSIFDEQTSKALKKWHMAVKKRQGKSPTRKLGSPNASPMHSSSGYTLHRFKTTGHSNRSSMYEENEASDYEVDPLSPKTPTANFSVRVDGRDEHQTEIIESQHSERRNEDEFSFAKPGPTKGP 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 76368284 76373927 + Tan0020361.1 Tan03g2178 747682

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2178 573 MobiDBLite consensus disorder prediction 478 513 - -
Tan03g2178 573 PANTHER MLO-LIKE PROTEIN 1 24 515 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Tan03g2178 573 MobiDBLite consensus disorder prediction 537 564 - -
Tan03g2178 573 Pfam Mlo family 28 491 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Tan03g2178 573 MobiDBLite consensus disorder prediction 470 573 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2178 K08472 - - csv:101212923 1029.62
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2753 Tan-Chr1:49834020 Tan03g2178 Tan-Chr3:76368284 3.00E-178 dispersed
Tan03g2178 Tan-Chr3:76368284 Tan08g2274 Tan-Chr8:74215301 4.80E-198 dispersed
Tan03g2178 Tan-Chr3:76368284 Tan05g0268 Tan-Chr5:2011037 4.40E-143 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi7g1218 . . . . . . . . . . . . . . Sed14g1259 . . Bhi03g00753 Tan03g2178 Cmetu03g1162 . Hepe04g1676 . . . . . . . . . . . . . . . . . Blo05g00663 . . . . . . . . . . Cma03g00619 Cma07g00379 . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan11g0588 . 3 533 MLO family AT5G53760 72.2 6.5e-219 757.7
Tan11g0589 . 3 533 MLO family AT5G53760 72.2 6.5e-219 757.7
Tan01g4409 . 10 554 MLO family AT5G53760 70.3 4.2e-218 755.0
Tan11g0590 . 15 505 MLO family AT5G53760 72.2 5.9e-204 708.0
Tan01g2584 . 10 477 MLO family AT3G45290 54.5 2.9e-138 489.6
Tan01g4409 . 1 554 MLO family AT1G26700 67.4 4.3e-212 734.9
Tan11g0588 . 3 532 MLO family AT1G26700 70.7 1.7e-211 733.0
Tan11g0589 . 3 532 MLO family AT1G26700 70.7 1.7e-211 733.0
Tan11g0590 . 14 504 MLO family AT1G26700 70.2 3.3e-196 682.2
Tan04g0583 . 7 520 MLO family AT2G39200 65.1 2.1e-193 672.9
Tan01g2581 . 8 536 MLO family AT2G39200 63.7 6.8e-192 667.9
Tan05g0268 . 8 503 MLO family AT2G39200 66.9 3.2e-189 659.1
Tan04g0584 . 7 434 MLO family AT2G39200 67.2 2.3e-168 589.7
Tan04g0585 . 7 404 MLO family AT2G39200 67.5 1.1e-157 554.3
Tan03g2178 . 28 472 MLO family AT2G39200 50.7 3.9e-123 439.5
Tan05g0268 . 8 414 MLO family AT1G61560 67.6 2.6e-161 565.8
Tan01g2581 . 8 416 MLO family AT1G61560 67.2 1.4e-159 560.1
Tan04g0583 . 7 404 MLO family AT1G61560 64.5 1.0e-152 537.3
Tan04g0584 . 7 404 MLO family AT1G61560 64.5 1.0e-152 537.3
Tan04g0585 . 7 404 MLO family AT1G61560 64.5 1.0e-152 537.3
Tan03g2178 . 28 424 MLO family AT1G61560 53.4 5.2e-117 418.7
Tan01g2753 . 10 411 MLO family AT1G61560 51.5 1.6e-113 407.1
Tan08g2274 . 56 450 MLO family AT1G61560 51.2 3.8e-112 402.5
Tan03g2178 . 10 492 MLO family AT2G17430 62.3 2.6e-169 592.8
Tan08g2274 . 56 514 MLO family AT2G17430 63.0 5.1e-157 552.0
Tan01g2753 . 6 475 MLO family AT2G17430 58.6 9.3e-151 531.2
Tan05g0268 . 7 456 MLO family AT2G17430 50.7 4.8e-123 439.1
Tan01g2581 . 3 458 MLO family AT2G17430 50.2 8.2e-123 438.3
Tan03g2178 . 6 569 MLO family AT2G17480 63.7 2.9e-198 689.1
Tan08g2274 . 56 604 MLO family AT2G17480 60.9 9.2e-176 614.4
Tan01g2753 . 10 482 MLO family AT2G17480 60.7 2.3e-158 556.6
Tan05g0268 . 8 461 MLO family AT2G17480 51.1 3.9e-126 449.5
Tan01g2581 . 8 463 MLO family AT2G17480 52.2 7.4e-125 445.3
Tan01g2753 . 7 376 MLO family AT1G42560 61.7 1.2e-128 457.2
Tan03g2178 . 28 388 MLO family AT1G42560 60.8 7.6e-123 438.0
Tan08g2274 . 56 415 MLO family AT1G42560 57.0 1.0e-111 401.0
Tan01g2581 . 6 381 MLO family AT1G42560 50.1 1.9e-94 343.6
Tan06g2192 . 1 419 MLO family AT4G24250 53.3 8.0e-115 411.4
Tan05g0043 . 11 414 MLO family AT4G24250 51.5 3.2e-111 399.4
Tan06g2193 . 1 395 MLO family AT4G24250 53.5 2.8e-107 386.3
Tan06g2194 . 1 395 MLO family AT4G24250 53.5 2.8e-107 386.3
Tan06g2195 . 26 295 MLO family AT4G24250 56.7 2.1e-83 307.0
Tan03g2178 . 8 389 MLO family AT5G65970 65.7 9.8e-144 507.7
Tan08g2274 . 55 415 MLO family AT5G65970 66.8 8.0e-138 488.0
Tan01g2753 . 5 376 MLO family AT5G65970 61.7 1.6e-125 447.2
Tan05g0268 . 2 379 MLO family AT5G65970 51.1 6.9e-105 378.6
Tan01g2581 . 2 381 MLO family AT5G65970 51.6 3.2e-102 369.8
Tan01g2753 . 1 535 MLO family AT2G33670 59.9 1.0e-172 604.0
Tan03g2178 . 20 488 MLO family AT2G33670 59.9 2.5e-158 556.2
Tan08g2274 . 56 498 MLO family AT2G33670 56.5 3.8e-138 489.2
Tan04g0583 . 64 521 MLO family AT1G11310 63.0 1.5e-171 600.1
Tan01g2581 . 63 506 MLO family AT1G11310 64.4 7.7e-163 571.2
Tan05g0268 . 63 518 MLO family AT1G11310 62.6 1.1e-161 567.4
Tan04g0584 . 64 434 MLO family AT1G11310 64.8 3.0e-143 506.1
Tan04g0585 . 64 404 MLO family AT1G11310 64.9 4.1e-132 469.2
Tan01g2753 . 65 462 MLO family AT1G11310 50.4 2.8e-104 376.7
Tan06g2192 . 1 501 MLO family AT2G44110 59.9 3.8e-167 585.5
Tan06g2193 . 1 395 MLO family AT2G44110 62.0 1.8e-137 486.9
Tan06g2194 . 1 395 MLO family AT2G44110 62.0 1.8e-137 486.9
Tan06g2195 . 26 377 MLO family AT2G44110 63.4 3.7e-130 462.6
Tan06g2192 . 1 485 MLO family AT4G02600 76.1 1.2e-211 733.4
Tan06g2193 . 1 404 MLO family AT4G02600 75.1 6.0e-171 598.2
Tan06g2194 . 1 404 MLO family AT4G02600 75.1 6.0e-171 598.2
Tan06g2195 . 21 361 MLO family AT4G02600 80.1 1.6e-160 563.5
Tan01g0784 . 3 560 MLO family AT1G11000 67.5 9.7e-215 743.8
Tan01g2309 . 1 458 MLO family AT1G11000 54.2 3.0e-131 466.5
Tan01g2310 . 1 384 MLO family AT1G11000 53.7 8.2e-105 378.6
Tan06g2192 . 1 485 MLO family AT4G02600 76.1 1.2e-211 733.4
Tan06g2193 . 1 404 MLO family AT4G02600 75.1 6.0e-171 598.2
Tan06g2194 . 1 404 MLO family AT4G02600 75.1 6.0e-171 598.2
Tan06g2195 . 21 361 MLO family AT4G02600 80.1 1.6e-160 563.5
Tan04g0583 . 64 521 MLO family AT1G11310 63.0 1.5e-171 600.1
Tan01g2581 . 63 506 MLO family AT1G11310 64.4 7.7e-163 571.2
Tan05g0268 . 63 518 MLO family AT1G11310 62.6 1.1e-161 567.4
Tan04g0584 . 64 434 MLO family AT1G11310 64.8 3.0e-143 506.1
Tan04g0585 . 64 404 MLO family AT1G11310 64.9 4.1e-132 469.2
Tan01g2753 . 65 462 MLO family AT1G11310 50.4 2.8e-104 376.7
Tan01g2584 . 10 477 MLO family AT3G45290 54.5 2.9e-138 489.6
Tan01g0784 . 3 560 MLO family AT1G11000 67.5 9.7e-215 743.8
Tan01g2309 . 1 458 MLO family AT1G11000 54.2 3.0e-131 466.5
Tan01g2310 . 1 384 MLO family AT1G11000 53.7 8.2e-105 378.6
Tan01g2753 . 1 535 MLO family AT2G33670 59.9 1.0e-172 604.0
Tan03g2178 . 20 488 MLO family AT2G33670 59.9 2.5e-158 556.2
Tan08g2274 . 56 498 MLO family AT2G33670 56.5 3.8e-138 489.2
Tan05g0268 . 8 414 MLO family AT1G61560 67.6 2.6e-161 565.8
Tan01g2581 . 8 416 MLO family AT1G61560 67.2 1.4e-159 560.1
Tan04g0583 . 7 404 MLO family AT1G61560 64.5 1.0e-152 537.3
Tan04g0584 . 7 404 MLO family AT1G61560 64.5 1.0e-152 537.3
Tan04g0585 . 7 404 MLO family AT1G61560 64.5 1.0e-152 537.3
Tan03g2178 . 28 424 MLO family AT1G61560 53.4 5.2e-117 418.7
Tan01g2753 . 10 411 MLO family AT1G61560 51.5 1.6e-113 407.1
Tan08g2274 . 56 450 MLO family AT1G61560 51.2 3.8e-112 402.5
Tan03g2178 . 10 492 MLO family AT2G17430 62.3 2.6e-169 592.8
Tan08g2274 . 56 514 MLO family AT2G17430 63.0 5.1e-157 552.0
Tan01g2753 . 6 475 MLO family AT2G17430 58.6 9.3e-151 531.2
Tan05g0268 . 7 456 MLO family AT2G17430 50.7 4.8e-123 439.1
Tan01g2581 . 3 458 MLO family AT2G17430 50.2 8.2e-123 438.3
Tan03g2178 . 6 569 MLO family AT2G17480 63.7 2.9e-198 689.1
Tan08g2274 . 56 604 MLO family AT2G17480 60.9 9.2e-176 614.4
Tan01g2753 . 10 482 MLO family AT2G17480 60.7 2.3e-158 556.6
Tan05g0268 . 8 461 MLO family AT2G17480 51.1 3.9e-126 449.5
Tan01g2581 . 8 463 MLO family AT2G17480 52.2 7.4e-125 445.3
Tan01g2753 . 7 376 MLO family AT1G42560 61.7 1.2e-128 457.2
Tan03g2178 . 28 388 MLO family AT1G42560 60.8 7.6e-123 438.0
Tan08g2274 . 56 415 MLO family AT1G42560 57.0 1.0e-111 401.0
Tan01g2581 . 6 381 MLO family AT1G42560 50.1 1.9e-94 343.6
Tan03g2178 . 8 389 MLO family AT5G65970 65.7 9.8e-144 507.7
Tan08g2274 . 55 415 MLO family AT5G65970 66.8 8.0e-138 488.0
Tan01g2753 . 5 376 MLO family AT5G65970 61.7 1.6e-125 447.2
Tan05g0268 . 2 379 MLO family AT5G65970 51.1 6.9e-105 378.6
Tan01g2581 . 2 381 MLO family AT5G65970 51.6 3.2e-102 369.8
Tan11g0588 . 3 533 MLO family AT5G53760 72.2 6.5e-219 757.7
Tan11g0589 . 3 533 MLO family AT5G53760 72.2 6.5e-219 757.7
Tan01g4409 . 10 554 MLO family AT5G53760 70.3 4.2e-218 755.0
Tan11g0590 . 15 505 MLO family AT5G53760 72.2 5.9e-204 708.0
Tan04g0583 . 7 520 MLO family AT2G39200 65.1 2.1e-193 672.9
Tan01g2581 . 8 536 MLO family AT2G39200 63.7 6.8e-192 667.9
Tan05g0268 . 8 503 MLO family AT2G39200 66.9 3.2e-189 659.1
Tan04g0584 . 7 434 MLO family AT2G39200 67.2 2.3e-168 589.7
Tan04g0585 . 7 404 MLO family AT2G39200 67.5 1.1e-157 554.3
Tan03g2178 . 28 472 MLO family AT2G39200 50.7 3.9e-123 439.5
Tan06g2192 . 1 419 MLO family AT4G24250 53.3 8.0e-115 411.4
Tan05g0043 . 11 414 MLO family AT4G24250 51.5 3.2e-111 399.4
Tan06g2193 . 1 395 MLO family AT4G24250 53.5 2.8e-107 386.3
Tan06g2194 . 1 395 MLO family AT4G24250 53.5 2.8e-107 386.3
Tan06g2195 . 26 295 MLO family AT4G24250 56.7 2.1e-83 307.0
Tan01g4409 . 1 554 MLO family AT1G26700 67.4 4.3e-212 734.9
Tan11g0588 . 3 532 MLO family AT1G26700 70.7 1.7e-211 733.0
Tan11g0589 . 3 532 MLO family AT1G26700 70.7 1.7e-211 733.0
Tan11g0590 . 14 504 MLO family AT1G26700 70.2 3.3e-196 682.2
Tan06g2192 . 1 501 MLO family AT2G44110 59.9 3.8e-167 585.5
Tan06g2193 . 1 395 MLO family AT2G44110 62.0 1.8e-137 486.9
Tan06g2194 . 1 395 MLO family AT2G44110 62.0 1.8e-137 486.9
Tan06g2195 . 26 377 MLO family AT2G44110 63.4 3.7e-130 462.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000765 3 4 3 4 2 3 4 3 3 3 2 3 4 3 3 4 2 3 4 3 3 3 3 3 3 3 2 6 2 2 93