Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g2189 | ATGGCGCTTAATGTTGGGGGATGTGGTCGTAGATCTGGGTATGTAAATCACATGTTTCAACAACGGAGTGCTCATAATTCAAGCTTTCTTCAAAACGATTCATTAGTTCGAGATCAGCATATACCTTCTGATGCCAGCTTGATGGAACCCACAAGTGGAAGTAATGGTCCTAGCAACAACCCGAATTTGGCCTCAAAGCAGAGACTGCGATGGACACATGATCTTCACGAACGATTCGTTAATGCAGTAGCACAACTTGGTGGTCCAGATCGTGCTACACCTAAAGGTGTCCTTAGAGTAATGGGTGTTCAAGGTTTAACAATATACCACGTTAAAAGCCACCTGCAGAAATATCGACTTGCAAAATACCTTCCCGACTCCTCATCTGATGGGAAAAAGGCTGACAAGAAGGATTCTAGTGACATTCTATCAAACATTGATGGTTCGTCGGGAATGCAAATTACTGAAGCACTTAAGCTGCAGATGGAGGTCCAGAAGCGACTGCATGAGCAATTAGAGGTACAGAGACAGCTACAGTTACGGATTGAAGCCCAAGGCAAGTACCTAAAGAAGATAATTGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGGAGCTCCAGTTGCCTCTTCCTTTTCAGCTCCTGCTTCTGGTGACAACTCCCCAGAAACTGATAAAAACGACCCACCAACACCTGCGCCCACATCCGAGTCTCCTCGCCAAGAGAAAGCATCAAAGGAACGTGCCCAAGCCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCAGCACGAACCATCAACACCAGATTCTGGTTGCCATAGCTCCCCAAATGAGAGCCCAAGGCCAGTGAAGAAACAAAGGCAGTTCAGGGATGGTGCATTTGCCAAATCAGAGATGATATTTGCACATCAAATACTGGAATCAAGTCTAAACTCCACTCTCAAGGAGTCGCGCTCTGTTTTTCCAGCCCGGGAAAAGTTTGATTCTTCATCTGGAATATCGATAGGGGAAGACAATCGGTTGGACTAA | 1032 | 45.35 | MALNVGGCGRRSGYVNHMFQQRSAHNSSFLQNDSLVRDQHIPSDASLMEPTSGSNGPSNNPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKKDSSDILSNIDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPVASSFSAPASGDNSPETDKNDPPTPAPTSESPRQEKASKERAQAKSVSIDDSFSSQHEPSTPDSGCHSSPNESPRPVKKQRQFRDGAFAKSEMIFAHQILESSLNSTLKESRSVFPAREKFDSSSGISIGEDNRLD | 343 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 76424254 | 76427429 | - | Tan0005077.1 | Tan03g2189 | 747693 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g2189 | 343 | SUPERFAMILY | Homeodomain-like | 65 | 120 | IPR009057 | - | |
Tan03g2189 | 343 | Coils | Coil | 155 | 175 | - | - | |
Tan03g2189 | 343 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 63 | 123 | IPR017930 | - | |
Tan03g2189 | 343 | MobiDBLite | consensus disorder prediction | 254 | 283 | - | - | |
Tan03g2189 | 343 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 66 | 121 | IPR006447 | GO:0003677(InterPro) | |
Tan03g2189 | 343 | MobiDBLite | consensus disorder prediction | 44 | 64 | - | - | |
Tan03g2189 | 343 | Pfam | MYB-CC type transfactor, LHEQLE motif | 152 | 198 | IPR025756 | - | |
Tan03g2189 | 343 | Gene3D | - | 65 | 124 | - | - | |
Tan03g2189 | 343 | MobiDBLite | consensus disorder prediction | 310 | 343 | - | - | |
Tan03g2189 | 343 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE | 33 | 279 | IPR046955 | GO:0003700(InterPro) | |
Tan03g2189 | 343 | MobiDBLite | consensus disorder prediction | 125 | 148 | - | - | |
Tan03g2189 | 343 | MobiDBLite | consensus disorder prediction | 126 | 142 | - | - | |
Tan03g2189 | 343 | Pfam | Myb-like DNA-binding domain | 68 | 119 | IPR001005 | - | |
Tan03g2189 | 343 | FunFam | Myb family transcription factor | 65 | 123 | - | - | |
Tan03g2189 | 343 | MobiDBLite | consensus disorder prediction | 207 | 292 | - | - | |
Tan03g2189 | 343 | MobiDBLite | consensus disorder prediction | 207 | 226 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g2189 | Tan-Chr3:76424254 | Tan08g1372 | Tan-Chr8:54544996 | 6.30E-44 | dispersed | |
Tan03g2189 | Tan-Chr3:76424254 | Tan03g2190 | Tan-Chr3:76431564 | 2.20E-20 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27066 | PF00249 | Myb_DNA-binding | 1.30E-07 | CL0123 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g2189 | - | - | - | 0.0 |