Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2190 ATGTTTCCAAGACTTGTTAATCCTGACGGAGATATCCAGATCCATGGCGCCCGTGGTTCTGTTGCTTCCGACCTCACTCACACGCACAGGGGCGACCCTTGTCTCGTTTTGACTTCAGATCCTAAACCTCGCCTCCGATGGACTGCCGATCTTCACGAGCGATTCGTTGATGCTGTCACTCAGCTCGGTGGTGCTAGCAAAGCTACACCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGAAATTCAGATTAGGTAAGCAATCAGGGAAGGATATGGGTGAGGCATCTAAAGATGGTGCATATCTTTTAGAAAGTCCAAGTACCAATAATTTCTCTCCTGACTTGCCAATTTCTGAAATGGCCGATGGTTATGAAGTCAAGGAGGCATTAAGAGCGCAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTTGAGGCAGAGAAGCACCTACGAATTCGTCAGGATGCCGAGCGGAGATATTTGGCCATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTTATTGGAGGTGCAGTTTCGGACTCAGACAGCAAGAAGTCCCAAGGACTGGATCGTAAGAGCCCAAGAAGTTCCTCGATCGACCCACTTGGTTTCTATGCTTCGCAATCACAAGAGATGGAAAGAGTGAACGGCACAGAAGAAGTTCAGGCTAATCTTCCTTGCCAAAGGGCTGATTGTTCGACCGAAAGCTGCCTAACCTCAAACGAAAGTCCTGGGGGATTGACCATGGAAAAATCTCCAGTGGCAAGCAAGAAAAACATGGTTAACTTGGATTCAGCAACTGCATCTTTGATTTGGGGTGAAGCCAAGGAAAGAATACAAGATGCTAATATCATCCAAGTCAACCATCATGGCGTATCCGGGTGCGACATGTGGGGATGA 942 46.71 MFPRLVNPDGDIQIHGARGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKFRLGKQSGKDMGEASKDGAYLLESPSTNNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERACKMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQEMERVNGTEEVQANLPCQRADCSTESCLTSNESPGGLTMEKSPVASKKNMVNLDSATASLIWGEAKERIQDANIIQVNHHGVSGCDMWG 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 76431564 76436971 - Tan0020472.1 Tan03g2190 747694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2190 313 MobiDBLite consensus disorder prediction 191 215 - -
Tan03g2190 313 FunFam Myb family transcription factor 41 99 - -
Tan03g2190 313 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Tan03g2190 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 27 291 IPR046955 GO:0003700(InterPro)
Tan03g2190 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 42 97 IPR006447 GO:0003677(InterPro)
Tan03g2190 313 Pfam Myb-like DNA-binding domain 44 94 IPR001005 -
Tan03g2190 313 Pfam MYB-CC type transfactor, LHEQLE motif 137 182 IPR025756 -
Tan03g2190 313 Gene3D - 41 99 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2190 Tan-Chr3:76431564 Tan10g0520 Tan-Chr10:4152978 1.40E-45 dispersed
Tan03g2189 Tan-Chr3:76424254 Tan03g2190 Tan-Chr3:76431564 2.20E-20 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27067 PF14379 Myb_CC_LHEQLE 1.00E-15 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2190 - - - 0.0