Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2209 ATGGCCTCAATTGCTGGTTCCAAAGCTTCCTCAAATCATCCACAAAAAACAGCCAATGGTGAAATGGCTAATGGGAAGGATGCCGGGCCCTTGCCTCCGCAGATTTCGAAGTTAAGTAAACCTGAACCAGTTACTTCTGATCAGTCTAAATCAGTAAAGAGTATCTCAAAGCAGGATATGGAAATATTTTCCGACAAAAAGTCACCGGTATCGAATCAAAATGGATCTGCTAAGTTGTTGACTGAAAAATTTAATTTCAGCATTTCGTCGCCTGGTCTGAAACAAACATCAACTGAAGTAGATTCCCCTCACAATGAAGCTAGATGCTCACCTGGAAGCTCACTAGACCAAGAGAAGAAAACATCAGAATATGGAAGTGTAAAGAGCAGTTCCTTTTCCGTCAAAGTAAGTGATGGGACTAGCTGTCTTGCCAAGACCAGTGGAAGTGCCAAGGTTAGCGACCACGGTAACTTTGTTGAGAGTGGCAAGAGCAGTATATGCAGAGGGAGCACGAGCAGTGATATAAGTGATGAGAGCTCTTGCAGTAGTTTTAGTAGTAGTATCAGTAAACCTCACAAAGCAAATGATTTGAGATGGGAGGCCATTCAAGTTGTCCGTGCAAAAGATGGGGCGATGGGATTAGGTCATTTTAGACTTCTTAAGAAGTTGGGTTGTGGGGATATTGGGAGTGTCTATCTCTCTGAGTTAAGTGGAACAAAATGCCATTTTGCAATGAAGGTTATGGATAAAAATACTCTAGCGAGTCGTAAAAAGTTGCTTCGGGCACAGACGGAAAGAGAAATACTTCAATCGCTTGATCACCCCTTCCTTCCAACGTTATACACCCACTTCGAGACAGAGAAATTTTCATGCTTGGTGATGGAGTTTTGTCCTGGAGGAGACTTGCACACTCTAAGGCAGAGGCAACCAGGGAAGCATTTTCCTGAGCAGGCAGTGAAATTCTATGTAGCAGAGGTTCTTCTTGCACTGGAATACCTGCACATGCTTGGGATTGTGTACCGTGATCTTAAGCCAGAAAATGTCCTCGTAAGGGAAGATGGACACATAATGCTTTCAGATTTTGACCTATCTCTCCGTTGTGCTGTTAGTCCAACTCTTGTCAAAAATCTCTCTGCAGAGTCTGAGGCTTTAAGAAAGAACACAGGTTACTGCGTGCAGCCTGCTTGCATTGAGCCTTCCTGCATCCAACCATCTTGTGTAGTTCCTACAACCTGCTTCTCACCTCGCCTCTTTTCTAGTAAGTCGAAGAAGGAACGGAAACCCAAAACTGAAATGGGAAATCAGGTCAGCCCATTGCCAGAGCTCATTGCAGAACCAACCGATGCCCGATCCATGTCTTTTGTTGGAACTCATGAGTACTTGGCACCTGAGATCATCAAGGGTGAAGGCCATGGAAGTGCTGTAGATTGGTGGACTTTTGGAATTTTTCTATACGAGCTACTGTTTGGTAAAACTCCTTTTAAGGGGTCTGGAAATCGAGCTACATTATTCAACATTGTCGGTCAGCCACTTCGGTTTCCAGATGCACCGGTTGTTAGTTTTGCTGCAAAGGATCTCATAAGGGGATTGCTAGTGAAGGAGCCACAACACAGATTGGCTTATAAACGTGGAGCAACTGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTGAACTGGGCATTAATACGATGTGCTACCCCTCCTGAAATCCCAAGGCCGGTCGAAATTGAGAGAATACCACAGGCAGTGGCATCAACCAGTGAAAAGGTCGCTGCTATTGCAGCAGCTGCAGATAAAAAAGCTTCCGATAATTATCTCGAGTTTGATTTCTTTTAG 1836 44.28 MASIAGSKASSNHPQKTANGEMANGKDAGPLPPQISKLSKPEPVTSDQSKSVKSISKQDMEIFSDKKSPVSNQNGSAKLLTEKFNFSISSPGLKQTSTEVDSPHNEARCSPGSSLDQEKKTSEYGSVKSSSFSVKVSDGTSCLAKTSGSAKVSDHGNFVESGKSSICRGSTSSDISDESSCSSFSSSISKPHKANDLRWEAIQVVRAKDGAMGLGHFRLLKKLGCGDIGSVYLSELSGTKCHFAMKVMDKNTLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKNLSAESEALRKNTGYCVQPACIEPSCIQPSCVVPTTCFSPRLFSSKSKKERKPKTEMGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNIVGQPLRFPDAPVVSFAAKDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPRPVEIERIPQAVASTSEKVAAIAAAADKKASDNYLEFDFF 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 76562627 76567239 + Tan0000414.1 Tan03g2209 747713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2209 611 MobiDBLite consensus disorder prediction 146 166 - -
Tan03g2209 611 MobiDBLite consensus disorder prediction 1 19 - -
Tan03g2209 611 FunFam Serine/threonine-protein kinase D6PK-like 215 300 - -
Tan03g2209 611 Pfam Protein kinase domain 451 554 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2209 611 Pfam Protein kinase domain 218 367 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2209 611 MobiDBLite consensus disorder prediction 1 76 - -
Tan03g2209 611 Gene3D Phosphorylase Kinase; domain 1 209 302 - -
Tan03g2209 611 CDD STKc_phototropin_like 216 577 - -
Tan03g2209 611 FunFam serine/threonine-protein kinase D6PK-like 301 368 - -
Tan03g2209 611 FunFam Serine/threonine-protein kinase AGC1-7 447 572 - -
Tan03g2209 611 SMART serkin_6 217 554 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2209 611 MobiDBLite consensus disorder prediction 90 122 - -
Tan03g2209 611 SUPERFAMILY Protein kinase-like (PK-like) 192 579 IPR011009 -
Tan03g2209 611 Gene3D Transferase(Phosphotransferase) domain 1 303 571 - -
Tan03g2209 611 MobiDBLite consensus disorder prediction 39 58 - -
Tan03g2209 611 PANTHER FLIPPASE KINASE 1-RELATED 81 586 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan03g2209 611 ProSiteProfiles Protein kinase domain profile. 217 554 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2209 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0174 Tan-Chr3:29022825 Tan03g2209 Tan-Chr3:76562627 9.30E-149 dispersed
Tan03g2209 Tan-Chr3:76562627 Tan07g1405 Tan-Chr7:65077508 3.40E-194 dispersed
Tan03g2209 Tan-Chr3:76562627 Tan03g2210 Tan-Chr3:76562627 0.00E+00 tandem
Tan08g0220 Tan-Chr8:1979177 Tan03g2209 Tan-Chr3:76562627 4.10E-113 transposed
Tan03g2209 Tan-Chr3:76562627 Tan05g1838 Tan-Chr5:62340206 6.00E-247 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67364 PF00069 Pkinase 1.10E-37 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2209 K08286 - csv:101209748 1101.66