Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2290 ATGGAATGGATGAGAGGCAGGATAATTGGCTGTGGCTCCTCCGCCGCGGTCTCCGTCGCCACTGATCTCCGGTCCGGCCAAGTGCTGGCGGTTAAATCAGTTGAGTTCGCCCACTCGGATTTTCTCAAGAGGGAACAGAGTATTCTTTCTCAATTGAATTGTCCGCGTGTTATAGCTTATAAGGGATTTGATGTTACGTTGGAAAATGGGAATTTGATGTGCAATCTTTTGATGGAGTTTGCGCCTGGTGGGTCGATTTTGGATGCCATGGCGGCGGCTGGTGGCCGATTAGATGAGGCGACGACCCAATTGTATACTCGAGAGATTTTAAGTGGGCTCGAGTATGTTCATTCTAATGGTGTGGTGCATTGTGACATTAAGTCTTGTAATATTTTGGTCGGTGAAGATGGGATTAAGATTGCGGATTTCGGTTGCGCGCGGCGGGTGGAGGAGGTTTCCGGTAGAAATTTGGCCGGAACGCCGATCTTCATGGCGCCGGAGGTGGCACGTGGAGAAAAACAGGGGTTTGCGGCTGATGTTTGGGCAGTGGGTTGCACGGTGATCCAGATGGTGACAGGCCGAGCTCCGTGGCCGGATGTGTCGGATCCGGTGGCCGCCATTTGCAGAATTGGGTCCGGCGATGACTTGCCAGAGATTCCAAGGTTCATGTCGGAGCAGGGCAAGGACTTTCTGCGGCGTTGTTTGATCAGAGACCCAGAAGAACGGTGGTCTGTTAGTGAGCTTCTGAAACACCCTTTTGTTCACGAGCAGAAATCTCGTCCCAAACAGAATTCAAGAACACCAACGAGCATTTTGGAACAAGGATTATGGGACACGATGAATGATTTGGAAACAGTTCAAAGTCCGATCAGGCCAAAAATTTTCAGAACGCCAATGCAGAGGATACAGCAACTGAGCGAAGTGCCCAAATTTCAGTCTTTTGAAATACCCAATTGGGAGAGCAACGAAGATTGGGTAACAGTGAGAAGCAAAGGCATGGAAGAAGAAGACAGAGAAAAAAGCGATTTCGTTTCTGTATTAGAATTGCCCTGTTCCTCTGAATCCATGGCAAAGGCAACTAAAAATGGAGTTGGTGATCAGATATATATTAGTATAAGTATTAATAGAAGCAGTGATTATTGTAGCAAAAAATGCAGTAAGGCTAAGAAAAGGGACTTGCCTGTGTCCTCTGTTTGCAACCAGATTGTAACATCGAACACAGTTAACTTTTCTAATAATGACAAATTATGTATTGTCATTTTTTTGTTTCTTGTTTTCCAATCCGGCAGTTCAGTTTATCTTATATTTTTGGAATATAATGAAAATGTTTTAATTCATCAAAATATTGGCAAACAAGTCGACGTGTCAAGAAAATGTGTAGTTTATATTTAA 1392 44.9 MEWMRGRIIGCGSSAAVSVATDLRSGQVLAVKSVEFAHSDFLKREQSILSQLNCPRVIAYKGFDVTLENGNLMCNLLMEFAPGGSILDAMAAAGGRLDEATTQLYTREILSGLEYVHSNGVVHCDIKSCNILVGEDGIKIADFGCARRVEEVSGRNLAGTPIFMAPEVARGEKQGFAADVWAVGCTVIQMVTGRAPWPDVSDPVAAICRIGSGDDLPEIPRFMSEQGKDFLRRCLIRDPEERWSVSELLKHPFVHEQKSRPKQNSRTPTSILEQGLWDTMNDLETVQSPIRPKIFRTPMQRIQQLSEVPKFQSFEIPNWESNEDWVTVRSKGMEEEDREKSDFVSVLELPCSSESMAKATKNGVGDQIYISISINRSSDYCSKKCSKAKKRDLPVSSVCNQIVTSNTVNFSNNDKLCIVIFLFLVFQSGSSVYLIFLEYNENVLIHQNIGKQVDVSRKCVVYI 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77105204 77106614 + Tan0001336.1 Tan03g2290 747794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2290 463 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524(InterPro)
Tan03g2290 463 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 255 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Tan03g2290 463 ProSiteProfiles Protein kinase domain profile. 3 254 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2290 463 CDD STKc_MAPKKK 2 254 - -
Tan03g2290 463 Pfam Protein kinase domain 5 254 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2290 463 Gene3D Transferase(Phosphotransferase) domain 1 2 312 - -
Tan03g2290 463 SMART serkin_6 3 254 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2290 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2290 463 SUPERFAMILY Protein kinase-like (PK-like) 3 303 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0354 Tan-Chr2:3027367 Tan03g2290 Tan-Chr3:77105204 2.30E-88 dispersed
Tan03g2290 Tan-Chr3:77105204 Tan08g2366 Tan-Chr8:75028267 2.50E-56 dispersed
Tan03g2290 Tan-Chr3:77105204 Tan05g0893 Tan-Chr5:7131630 6.20E-87 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67367 PF00069 Pkinase 6.90E-53 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2290 K20716 - csv:101210574 638.647