Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2333 ATGATTTCTTCACTGAGGCTTTCATCTTCCAATTTCGTTTCCTCTGAACTTTTCGACAGAAAATCTTCGATTCCGAGGCCGAAGCTTCCGGTGCAGTCCCCGAATCGAAGTGCTCTCAAACATCTCGACCGATCTCTTTCTACCAACAAACCACTTCACATCTCGTCCGTTGAGAATCTTTCTTTGCCCACTAAATCATTTGAGCGTTCGACGGAATGCAGGGCGTACGAGGCTGAATCGCGGCCTTTGCAGATTAACATTGAGCTTCCTGACGAACAGACAGCTCAGAAACTCAAAATTGGTCTCTATTTTGCCACTTGGTGGGCTTTGAATGTGGTGTTCAATGTCTACAACAAGAAGGTTCTTAATGCGTTCCCTTATCCATGGCTCACCTCCACCCTCTCCCTCGCCGCTGGATCGCTTATGATGCTCGTTTCTTGGGCCACTAGAATGGTCGACGCTCCCAAAACCGACTTGGATTTCTGGAAATCCCTGTTGCCGGTCGCAGTAGCGCATACCATTGGGCATGTTGCAGCAACTGTGAGCATGTCCAAAGTCGCAGTCTCATTCACTCACATAATCAAGAGTGGGGAGCCTGCTTTTAGTGTGTTGGTCTCCAGGTTTCTGCTGGGTGAGATGTTTCCATTGTCTGTCTACTTATCTCTCATCCCAATCATTGGAGGCTGTGCTCTTTCCGCCATTACTGAGCTCAATTTCAACATGATTGGTTTCATGGGAGCAATGATATCGAACTTGGCATTTGTTTTTAGAAACATATTCTCAAAGAAAGGGATGAAGGGAAAATCAGTGAGTGGGATGAATTACTATGCTTGCCTCTCATTGCTGTCTCTACTCATTCTCACTCCTTTCGCCATTGCTGTGGAGGGACCCAAGTTGTGGGCTGAAGGATTTCAAAAGGCTATCTCTCAAATTGGTCCCAATTTCATTTGGTGGTTAGGAGCTCAAAGTATGTTCTATCACTTGTACAATCAAGTGTCGTATATGTCTCTTGATCAGATATCTCCATTGACATTCAGCGTAGGAAACACAATGAAGAGAATATTCGTAATAGTGTCGTCCATTATCATCTTCCACACGCCTGTTCGACCCATCAACGCCATTGGAGCTGCCATTGCAATCCTTGGAACCTTCCTTTACTCGCAGGCCAAGCTGTGA 1176 45.92 MISSLRLSSSNFVSSELFDRKSSIPRPKLPVQSPNRSALKHLDRSLSTNKPLHISSVENLSLPTKSFERSTECRAYEAESRPLQINIELPDEQTAQKLKIGLYFATWWALNVVFNVYNKKVLNAFPYPWLTSTLSLAAGSLMMLVSWATRMVDAPKTDLDFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEMFPLSVYLSLIPIIGGCALSAITELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSLLSLLILTPFAIAVEGPKLWAEGFQKAISQIGPNFIWWLGAQSMFYHLYNQVSYMSLDQISPLTFSVGNTMKRIFVIVSSIIIFHTPVRPINAIGAAIAILGTFLYSQAKL 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77306985 77309045 - Tan0000378.1 Tan03g2333 747837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2333 391 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 98 390 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Tan03g2333 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 284 388 - -
Tan03g2333 391 Pfam Triose-phosphate Transporter family 98 387 IPR004853 -
Tan03g2333 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 234 - -
Tan03g2333 391 PANTHER SOLUTE CARRIER FAMILY 35 96 390 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4525 Tan-Chr1:110984590 Tan03g2333 Tan-Chr3:77306985 3.90E-154 dispersed
Tan03g2333 Tan-Chr3:77306985 Tan10g0406 Tan-Chr10:3269368 8.90E-87 dispersed
Tan03g2333 Tan-Chr3:77306985 Tan05g2003 Tan-Chr5:69968059 3.80E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2333 K15283 - csv:101216621 647.891