Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2334 ATGAGTGGATATGGCCCAAAATGCGCAAAGCCACTGCCTTCTTCGTACTATCACCTTCCGTCGAATGCACCGACGCGATCTCTTGACTTGGGCATCACAAATTTCGGTCCACAGTCGGGTTTCGTCGGAGAAATGTACGGAGCCGCCGACTTTCTCCGGTCCATTTCGAGACCTTCAGAAGCCGACAAGCCGGTTATCGTGGAGCTGGCCGTTTCCGCCATGGATGAATTGACCCGACTGGCTCAGGCCGGCGAACCGTTGTGGGTTCCGGCTGACAATACCAAGTCCACTGATCTGCTGCTTAATGAAGCCGAATATTTGACCACTTTCCGAGGCGGAATTGGCCCAAAACCGTTGGGCTTGAGAACTGAAGCTTCACGAGTTTCGGCTATTGTGTTCATGAACCATATTAAGCTTGTGGATATTTTTATGGACGCTACGCAATGGTCGACTGTGTTCTGTGGGATTGTTTCGAGAGCATCAACTGTGGAAGTTCTTTCCGCTGGCCTACCTGGAAACTGCAACGGCGCCTTGCACGTGATGAGCGCTGAATTCCAAGTCCCTTCGCCGCTTGTTCCGACTCGGGAAAACTACTTCGTAAGATACTGCAAACAGCACAGCGACGGCACATGGGCGGTGGCTGATGTTTCCTTGGACACTTTGCGCCCATCTCCCATCCCAAAGAGCCGACGGAGACCCTCTGGTTGTTTAATTCAAGAATTGCCCAACGGCTATTCAAAGATCACTTGGGTAGAACATGTAGAGATCGACGAAACTGGCGTCCCCACAATGTACAGACCGCTCGTTAATTCAGGCCTTGCTTTTGGGGCTAAACGATGGGTCGCTACTCTAGATAGGCAATGTGAACGTTTAGCCACTTCAATGGCCACCACCATTACCACCGGCGAATTACGCGTCATATCGAGTATTGAAGGAAGGAAGAGTATGCTGAAGCTAGCGGAGAGAATGGTTACGAGCTTTTGCGCCGGCGTCGGTGCGTCGACTGTACACGCTTGGACGGCGTTACCGGCCGCCGGCAGCGATGACGTTCGGGTAGTGACGAGGAAGAGCACCGATGAGCCTGGGCGACCACCTGGTGTTGTGCTCAGCGCCGCCACTTCTTTTTGGATCCCTGTTCCTCCTAAGGTTGTCTTTGATTTCCTTCGGAAAGAGAAATCTCGAAGCGAGTGGGATATTCTGTCGAATGGGGGCTTGGTTCAGGAAATGGCGCACATAGCCAACGGCCGCCACTCTGGGAACTGTGTCTCCTTGCTTCGTGTCAATAGTTTGAATTCGAGCCAGAGCAATATGCTGATACTACAAGAAAGCTGCACCGATTCTACGGGATCGTACGTGATTTATGCTCCGGTGGACACCGTTGCAATGAACGTGGTGCTAAGCGGTTGCGACCCGGATTACGTGGCACTTCTACCGTCGGGATTCGCCATACTACCCGACGGACCCGCCGGAGCCAACGGCGGAGGAATTCTGGAGGTCGGTTCCGGTGGGTCACTCATTACTGTTGCATTTCAAATCCTGGTTGATTCAGTTCCAACGGCAAGGCTTTCAATTGGATCGGTAGCCACCGTTAACAGTCTGATTAAGTGCACGGTAGAGAGGATCAGAGCCGCTGTGATGCGGGAAAACCCATGA 1653 52.69 MSGYGPKCAKPLPSSYYHLPSNAPTRSLDLGITNFGPQSGFVGEMYGAADFLRSISRPSEADKPVIVELAVSAMDELTRLAQAGEPLWVPADNTKSTDLLLNEAEYLTTFRGGIGPKPLGLRTEASRVSAIVFMNHIKLVDIFMDATQWSTVFCGIVSRASTVEVLSAGLPGNCNGALHVMSAEFQVPSPLVPTRENYFVRYCKQHSDGTWAVADVSLDTLRPSPIPKSRRRPSGCLIQELPNGYSKITWVEHVEIDETGVPTMYRPLVNSGLAFGAKRWVATLDRQCERLATSMATTITTGELRVISSIEGRKSMLKLAERMVTSFCAGVGASTVHAWTALPAAGSDDVRVVTRKSTDEPGRPPGVVLSAATSFWIPVPPKVVFDFLRKEKSRSEWDILSNGGLVQEMAHIANGRHSGNCVSLLRVNSLNSSQSNMLILQESCTDSTGSYVIYAPVDTVAMNVVLSGCDPDYVALLPSGFAILPDGPAGANGGGILEVGSGGSLITVAFQILVDSVPTARLSIGSVATVNSLIKCTVERIRAAVMRENP 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77316869 77319606 - Tan0018603.1 Tan03g2334 747838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2334 550 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 50 545 IPR042160 -
Tan03g2334 550 CDD START_ArGLABRA2_like 63 289 - -
Tan03g2334 550 ProSiteProfiles START domain profile. 59 293 IPR002913 GO:0008289(InterPro)
Tan03g2334 550 FunFam Homeobox-leucine zipper protein GLABRA 2 68 289 - -
Tan03g2334 550 SMART START_1 68 290 IPR002913 GO:0008289(InterPro)
Tan03g2334 550 Pfam START domain 69 290 IPR002913 GO:0008289(InterPro)
Tan03g2334 550 SUPERFAMILY Bet v1-like 61 291 - -
Tan03g2334 550 Gene3D - 116 296 IPR023393 -
Tan03g2334 550 SUPERFAMILY Bet v1-like 312 542 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2334 Tan-Chr3:77316869 Tan05g0866 Tan-Chr5:6853727 2.10E-219 dispersed
Tan03g2334 Tan-Chr3:77316869 Tan05g3114 Tan-Chr5:83299086 8.10E-219 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2334 K09338 - csv:101209093 950.658