Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2362 ATGGAGATGGAAAATTCAAAAAAACTTTTCTTCCTTTGCTTATTTTGTATAATACTCATGGTAATTTCAACGACACCGGAATTCGAGGCATACTCATGTTCAAACAACGGCAACTACAGCAGCAACAGTATTTACAAGCAAAATCTACAGAACCTACTTTCCTCCATCGTATCGAATACCAAAATAGATTACGGGTTTTACAATTTCACAGCCGGAGAAGAACCCAACAAAGTGAACGCCATCGCCCTTTGCCGAGGCGACTGGTCCGTGGATCAATGTAGGAGATGTGTCAATAATTCGAGTCGTGAGATCGTAAGGGTTTGTCCGAATCAGAAGGAGGCAATCGGATGGTACGACGATTGCATGCTTCGTTACTCAGATTCGTCAATATTTGGTGTTGGGAACAATGAAGTGCTTTCGCCATATTATTACAATACCTGGAATGCATCGGACATTGATGGGTTCACACGAGCACTGAGGAGTTTGTTTGACAAACTCAGAATTGAGGCTTCGTCGGGGAATTCTACCCGAAAATTTGCAGTTGGAGAGATAGCCGCACCCAATTTGGACACCATATATGGGTTTGTCCTGTGTACTCCGGATCTGTCCTATATGGATTGTGATAATTGCCTTATTCAGACTGTTGCAACTATTCCGATTGGGACTATAGGATCAAGTATATTTGCGGTAAGTTGCGCTTTGAGATTTGAGATCTATCGTTTCTTCAACTCCCCGCCACCGCCACCTCCTCATCCGCCACCGCCACCTCCTCATCGCTCTCTCTCTCTGCCCCCGTCGCCCCCTCTACCTTCGACACCAGGAAATAGTGGTAATACTGCTAAAACTGTTATAATTGTTGTGATCTCCATCGTTGCAACCATCATTCTTGTTGGCATTTGCATCATTTTAAGATTGAGGAAAGGAAAGCACAGAAGACCATCAGAACATTTTGAAAGGGAAGCCACTGACGAAATTAGCAGTGCGGAGACGATTCAATTTGATTTTGTTACAATTAAAGTTGCAACAAATAACTTCTCAATTGAAAACAAGCTTGGACATGGTGGATTTGGAGTTGTCTACAGAGGAAAGCTACCTGATGGACGGAGCATAGCAGTGAAAAGGCTTTTGAGAAATTCAGAACAAGGCGACCATGAATTCAAAAATGAAGTCCTTTTGGTTGCCAAACTTCAACATCGAAACTTGGTTCGGTTACTAGGATTTTGCTTGCATGGAAACGAAAGACTTCTCATATATGAGTTTGTATCAAATGGCAGTCTTGACCGATTCATATTTGATTCTGGGAAGCAAGCTGTTTTAGATTGGGCAAGACGATACAAAATTATTGGTGGTATTGCACGAGGACTTCTTTACCTTCATGAAGATTCTCGTCTTCGAGTAATTCATCGTGATCTCAAAGCCAGTAATATTTTGTTGGATGATGAATTGAATCCAAAAATTGCAGATTTTGGCGCTGCCAGATTGTTTGAAATAGATGAGACTCAAGGCAGTACAAAGAAAGTTGTAGGAACTTACGGCTACATGGCGCCAGAGTACGTTATCTTTGGACAATTTTCAGTAAAATCAGATGTCTTTAGCTTTGGTGTTTTGGTTCTTGAAATTATGACTGGCAAAAAAAATACGTGCTTTCGTAACGGAGACGAGAACGTGGAAGATCTCTTGAGCTTTGTAAGTATATGA 1698 41.58 MEMENSKKLFFLCLFCIILMVISTTPEFEAYSCSNNGNYSSNSIYKQNLQNLLSSIVSNTKIDYGFYNFTAGEEPNKVNAIALCRGDWSVDQCRRCVNNSSREIVRVCPNQKEAIGWYDDCMLRYSDSSIFGVGNNEVLSPYYYNTWNASDIDGFTRALRSLFDKLRIEASSGNSTRKFAVGEIAAPNLDTIYGFVLCTPDLSYMDCDNCLIQTVATIPIGTIGSSIFAVSCALRFEIYRFFNSPPPPPPHPPPPPPHRSLSLPPSPPLPSTPGNSGNTAKTVIIVVISIVATIILVGICIILRLRKGKHRRPSEHFEREATDEISSAETIQFDFVTIKVATNNFSIENKLGHGGFGVVYRGKLPDGRSIAVKRLLRNSEQGDHEFKNEVLLVAKLQHRNLVRLLGFCLHGNERLLIYEFVSNGSLDRFIFDSGKQAVLDWARRYKIIGGIARGLLYLHEDSRLRVIHRDLKASNILLDDELNPKIADFGAARLFEIDETQGSTKKVVGTYGYMAPEYVIFGQFSVKSDVFSFGVLVLEIMTGKKNTCFRNGDENVEDLLSFVSI 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77431430 77434988 + Tan0015292.2 Tan03g2362 747866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2362 565 Gene3D Transferase(Phosphotransferase) domain 1 421 564 - -
Tan03g2362 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2362 565 Pfam Protein tyrosine and serine/threonine kinase 346 545 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2362 565 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 130 - -
Tan03g2362 565 FunFam Cysteine-rich receptor-like protein kinase 10 140 241 - -
Tan03g2362 565 Gene3D - 27 129 IPR038408 -
Tan03g2362 565 Gene3D - 137 241 IPR038408 -
Tan03g2362 565 Gene3D Phosphorylase Kinase; domain 1 307 420 - -
Tan03g2362 565 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524(InterPro)
Tan03g2362 565 SUPERFAMILY Protein kinase-like (PK-like) 318 548 IPR011009 -
Tan03g2362 565 ProSiteProfiles Protein kinase domain profile. 345 565 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2362 565 ProSiteProfiles Gnk2-homologous domain profile. 137 241 IPR002902 -
Tan03g2362 565 MobiDBLite consensus disorder prediction 247 272 - -
Tan03g2362 565 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Tan03g2362 565 Pfam Salt stress response/antifungal 151 238 IPR002902 -
Tan03g2362 565 SMART serkin_6 345 563 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2362 565 FunFam Lectin-domain containing receptor kinase A4.3 421 564 - -
Tan03g2362 565 MobiDBLite consensus disorder prediction 247 275 - -
Tan03g2362 565 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Tan03g2362 565 FunFam Cysteine-rich receptor-like protein kinase 10 307 420 - -
Tan03g2362 565 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 106 561 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2362 Tan-Chr3:77431430 Tan03g2366 Tan-Chr3:77471631 5.60E-215 dispersed
Tan03g2361 Tan-Chr3:77431430 Tan03g2362 Tan-Chr3:77431430 4.50E-304 tandem
Tan03g2362 Tan-Chr3:77431430 Tan03g2363 Tan-Chr3:77443830 2.10E-185 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67375 PF00069 Pkinase 6.80E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2362 - - - 0.0