Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2363 ATGGAGATGGGAATTTCAAAAAACTCTCTCTTCTTTTGCTTCATTCTCATATTCATGGCTTCTACCGCCATTTCTCAAATAGAAGTCAAGACCCACTCATGTTCAAACAGCGGCAACTATACCAGAAACAGCATTTACAACCAAAATCTTGATACCCTCCTTTCCTCCATCGCATCCAACACTGACATTGATTATGGGTTTTACAATTTCTCAGCCGGACAGGAACCCGACAAGGTGAACGCCATCGCCCTTTGCCTGGGCGATCTGACGCTGGAAAAATGTAGAAGCTGTCTCATAAATTCGACTCGAAGGATTCTAGAGGATTGTCCCAACCAGAAGGAGGCAATTGGATGGTACACCGATTGTATGGTTCGTTACTCAAATAGATCAATATTTGGCATTGGGAACGACAGAGTTCTTGAGCCAGTTTTTATTGCCGGTCGGAATGCATCGGACATAGATGGCTACACTCAATCACTCAGAACTTTGTTGCAAAGACTGAGAAATCAGACTGCATCCGGAGATTCTAGACACAAATTTGCAGTGGGTGAAATTTCAGCACCCAATTTGGATACGATATTTGGGCTTCTTCAGTGTACTCCCGATTTAACCTTTGTGGATTGTAATAATTGTCTTATGAAGGCCGCTGGTCGTATTCCAACAGGAAGTGTCGGAACGAGGATATTTTTGACCAGCTGTTATTTGAGATATGAGACTAACGATCTTTTTTACAATGCTCTGTCTCCTCCGCCGCCGCCGCCCACTGCTGGTGGCGCTCCTTCCCCACCGCCTCTGCCTCCAACGCCAGAAAATAATGGCAATAATGTTAGAACTGTTATAGTTGTTGTGGTGTCCATCTTTGTCGCCATCCTTCTCGTTGTTGCCATTTTCATCATTTTCAGATTGAGGAAGAGAAAGCACAAAAAAGCATTAATAAAATCTGAAGGTGTTACTTTTGGAGACACCACTGATGAAATTAGCAGCATAGAGACCATTCAATTTGATTTTGACATCATTAAAGTTGCAACAAATGACTTCTCAAGTGAAAATAAACTTGGACAAGGTGGATTTGGAGCTGTTTACAAGGGTAAGCTACCCAATGGACAACACATTGCAGTGAAGAGGCTGGCGAATAATTCACAACAAGGAGATGTTGAATTCAAAAACGAAGTCCTTTTGGTGATCAAGCTTCAACATCGAAACTTGGTTAGGCTACTGGGATTCTGCTTGCAACAAAGTGAAAGACTTCTCATATATGAGTTTCTACCAAATGCCAGCCTTGACCAATTCATATTTGACGCTGCAAAGCGAACACAATTAAATTGGGAAAGGCGGTACAAAATTATAAATGGCATTGCACGAGCACTTCTTTACCTTCATGAAGATTCTCGCATTCGAATCATACATCGTGATCTCAAAGCTGGTAATATTTTGTTGGATGCTGAAATGAATCCAAAGATTGCAGATTTTGGTATGGCAAGATTGTTTGAAATAGATGAGACTCAAGGCAATACAAGTCGAATTGTGGGAACTTACGGCTATATGGCTCCAGAGTATGCCATGCATGGACAATTTTCAGTGAAATCAGATGTCTTTAGCTTTGGTATTTTGGTTCTTGAAATTGTGAGTGGTCGGAAAAATAATTATTTTCGCAATGAAGAAAAAGTAGAAGATCTCTCCAGCTTTGCATGGAAAAATTGGATAGCAGGAACTACTATAAATATCACCGATCCAATACTAAGTGATAGTTCAAAGATTGAAATAATGAGATGCATTCACATTGGACTATTGTGTGTTCAAGAGAATGCAACAGATCGTCCAACAATGGCTTCAGTGGTTTTGATGCTTAGTAGCTTCTCTCTCACTCTTCCTAAACCCTCTGAACCAGCATTCTTTATGCATAGTCAAATTGATGAATCCAACACACCATCAAAGCCACATTGTTGGTTGGAAATAACTCAAGCTAGCGATTTTGAAAGTACATCCCTTCAACACTCTAAGAATGAAACTTCAAAAATCAAAAAAATGGATAATTGGAATAGATGA 2046 40.32 MEMGISKNSLFFCFILIFMASTAISQIEVKTHSCSNSGNYTRNSIYNQNLDTLLSSIASNTDIDYGFYNFSAGQEPDKVNAIALCLGDLTLEKCRSCLINSTRRILEDCPNQKEAIGWYTDCMVRYSNRSIFGIGNDRVLEPVFIAGRNASDIDGYTQSLRTLLQRLRNQTASGDSRHKFAVGEISAPNLDTIFGLLQCTPDLTFVDCNNCLMKAAGRIPTGSVGTRIFLTSCYLRYETNDLFYNALSPPPPPPTAGGAPSPPPLPPTPENNGNNVRTVIVVVVSIFVAILLVVAIFIIFRLRKRKHKKALIKSEGVTFGDTTDEISSIETIQFDFDIIKVATNDFSSENKLGQGGFGAVYKGKLPNGQHIAVKRLANNSQQGDVEFKNEVLLVIKLQHRNLVRLLGFCLQQSERLLIYEFLPNASLDQFIFDAAKRTQLNWERRYKIINGIARALLYLHEDSRIRIIHRDLKAGNILLDAEMNPKIADFGMARLFEIDETQGNTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGILVLEIVSGRKNNYFRNEEKVEDLSSFAWKNWIAGTTINITDPILSDSSKIEIMRCIHIGLLCVQENATDRPTMASVVLMLSSFSLTLPKPSEPAFFMHSQIDESNTPSKPHCWLEITQASDFESTSLQHSKNETSKIKKMDNWNR 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77443830 77449762 + Tan0021157.1 Tan03g2363 747867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2363 681 SMART serkin_6 346 620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2363 681 FunFam Cysteine-rich receptor-like protein kinase 10 305 421 - -
Tan03g2363 681 ProSiteProfiles Gnk2-homologous domain profile. 138 242 IPR002902 -
Tan03g2363 681 FunFam Cysteine-rich receptor-like protein kinase 28 422 624 - -
Tan03g2363 681 MobiDBLite consensus disorder prediction 660 681 - -
Tan03g2363 681 Gene3D Phosphorylase Kinase; domain 1 311 421 - -
Tan03g2363 681 CDD STKc_IRAK 352 616 - -
Tan03g2363 681 Gene3D Transferase(Phosphotransferase) domain 1 422 625 - -
Tan03g2363 681 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Tan03g2363 681 Pfam Protein tyrosine and serine/threonine kinase 349 613 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2363 681 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Tan03g2363 681 Pfam Salt stress response/antifungal 151 239 IPR002902 -
Tan03g2363 681 SUPERFAMILY Protein kinase-like (PK-like) 334 653 IPR011009 -
Tan03g2363 681 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 157 632 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan03g2363 681 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 131 - -
Tan03g2363 681 Gene3D - 142 241 IPR038408 -
Tan03g2363 681 Gene3D - 27 130 IPR038408 -
Tan03g2363 681 MobiDBLite consensus disorder prediction 248 270 - -
Tan03g2363 681 ProSiteProfiles Protein kinase domain profile. 346 620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2363 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2363 681 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2363 Tan-Chr3:77443830 Tan03g2366 Tan-Chr3:77471631 1.10E-246 dispersed
Tan03g2362 Tan-Chr3:77431430 Tan03g2363 Tan-Chr3:77443830 2.10E-185 tandem
Tan03g2363 Tan-Chr3:77443830 Tan03g2364 Tan-Chr3:77457839 4.00E-292 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67376 PF07714 PK_Tyr_Ser-Thr 4.20E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2363 - - - 0.0