Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2365 ATGGAGATGGGAACTCCAAAAAACCTTTTCTTCCTTTGTTTCATTTTCATATTCTTGGTTTCTACCACCATTTCGCAAGTGGCAGTCGAAACCCATTTATGCTCAAACAGTGGCAACTATACCAGAAACAGCATTTACAACCAAAATCTCGATAGCCTCCTTTCCTCCATCGCATCCAACACCGATATAGATTACGGGTTTTACAATTTCTCTGCCGGACAGAATGCCGACAGGGTGAATGCCATCGCCCTTTGCTTGGGTGATCTGACGGTGGAACAATGCAGGAGCTGTCTCATGAATTCGACTCGAAGGATTCTAGATGATTGTCCCAACCAGAAGGAAGCTATCGGATGGTACACTAATTGTATGATTCGTTACTCAGATAAATCAATATTTGGCATTGGGAACGACAGAGTGCTCGAGCCAGTTTTTATTGCTGGTGAGAATGCCTCGGACATAGATGGGCACACTCAATCACTCGGAACTTTGTTGCAAAGACTTAGAAATCAGGCTGCATCTGGGGATTCTAGACACAAATTTGCAACAGGTGAAATTGCAGGACCCAATTTGGATACCATAATTGGGCTTCTTCAGTGTACTCCCGATTTGACCTTTGTGGATTGTAATAATTGCCTTATGAAGGCCGCTACTCGCGTTCCAACTGGAAGTATAGGAACCAGGATTTTCTTGACCAGCTGTTATTTGAGATATGAGACTAACGATCTTTTCAACAACCCCCTGTCGCCGCCGCCGCCCACTGCCGGTAGCGCTCCTTCCCCACCCATGTCGCCGCCGCCTCTGCCTCCGACGCCAGACAATACTGCTAGAACTATTATCATCGTTGTGGTGTCCATAGTTTCAGCCGTCATTCTTGTTGTTGGAATTTTCATCATTTTGAGATTGAGGAAGCGAAAGAACAAAAGACCAACAGACAAATTTGAAGGTGTAGTTATTGGGGACACTACTGATGAAATTAGCAGTGTGGAGACAATTCAATATGATTTTGAAACCATTAAAGATGCAACAAATGGCTTCTCAAGTGAAAACAAGCTTGGACAGGGTGGATTTGGAGCTGTTTACAAGGGTAAGCTACCTAATGGACAATGTATAGCAGTGAAGAGGCTTGCGAATAATTCACAACAAGGAGATGTTGAATTTAAAAATGAAGTTCTTTTGGTGGTCAAGCTCCAACATCGAAATTTGGTTAGGCTGTTGGGATTTTGCTTGCAAAAAAATGAAAGATTACTCATATATGAGTTTGTACCAAACGCCAGCCTTGACCAATTCATATTTGATAATTTTGGAAAGCGGACATTATTGGACTGGGAAAAGCGATTCAAAATCATAAATGGTATTGCACGAGGAATTCTTTACCTTCATGAAGATTCTCGTCTTCGGATCATACATCGTGATCTAAAAGCTAGTAATATTTTGTTGGATGAGGAAATGAATCCAAAGATTGCTGATTTTGGTATGGCAAGATTGTTTGAAGTGGATGAGACTCAAGGCAATACAAGTAGAATTGTGGGAACTTAG 1536 42.06 MEMGTPKNLFFLCFIFIFLVSTTISQVAVETHLCSNSGNYTRNSIYNQNLDSLLSSIASNTDIDYGFYNFSAGQNADRVNAIALCLGDLTVEQCRSCLMNSTRRILDDCPNQKEAIGWYTNCMIRYSDKSIFGIGNDRVLEPVFIAGENASDIDGHTQSLGTLLQRLRNQAASGDSRHKFATGEIAGPNLDTIIGLLQCTPDLTFVDCNNCLMKAATRVPTGSIGTRIFLTSCYLRYETNDLFNNPLSPPPPTAGSAPSPPMSPPPLPPTPDNTARTIIIVVVSIVSAVILVVGIFIILRLRKRKNKRPTDKFEGVVIGDTTDEISSVETIQYDFETIKDATNGFSSENKLGQGGFGAVYKGKLPNGQCIAVKRLANNSQQGDVEFKNEVLLVVKLQHRNLVRLLGFCLQKNERLLIYEFVPNASLDQFIFDNFGKRTLLDWEKRFKIINGIARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLFEVDETQGNTSRIVGT 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77457839 77461291 + Tan0014216.2 Tan03g2365 747869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2365 511 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 151 511 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan03g2365 511 ProSiteProfiles Protein kinase domain profile. 345 511 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2365 511 Gene3D Transferase(Phosphotransferase) domain 1 421 511 - -
Tan03g2365 511 Gene3D Phosphorylase Kinase; domain 1 317 420 - -
Tan03g2365 511 Pfam Salt stress response/antifungal 154 239 IPR002902 -
Tan03g2365 511 Pfam Salt stress response/antifungal 34 128 IPR002902 -
Tan03g2365 511 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Tan03g2365 511 Pfam Protein tyrosine and serine/threonine kinase 348 502 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2365 511 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 421 511 - -
Tan03g2365 511 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524(InterPro)
Tan03g2365 511 FunFam Cysteine-rich receptor-like protein kinase 10 305 420 - -
Tan03g2365 511 Gene3D - 26 130 IPR038408 -
Tan03g2365 511 Gene3D - 142 241 IPR038408 -
Tan03g2365 511 SUPERFAMILY Protein kinase-like (PK-like) 326 511 IPR011009 -
Tan03g2365 511 ProSiteProfiles Gnk2-homologous domain profile. 138 242 IPR002902 -
Tan03g2365 511 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 131 - -
Tan03g2365 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2365 511 SMART serkin_6 345 509 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2365 511 MobiDBLite consensus disorder prediction 245 270 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2365 Tan-Chr3:77457839 Tan03g2369 Tan-Chr3:77524726 9.10E-156 dispersed
Tan03g2364 Tan-Chr3:77457839 Tan03g2365 Tan-Chr3:77457839 5.40E-273 tandem
Tan03g2365 Tan-Chr3:77457839 Tan03g2366 Tan-Chr3:77471631 3.50E-184 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67378 PF00069 Pkinase 5.00E-33 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2365 - - - 0.0