Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2366 ATGGCGATGGAAACTTCAAAAAACCTCTTATTCCTTTTCTTTATTCACATATTCATCGTTTCTAACACCATTTCCCAACCGGATTTCGTGGCACACTCATGTTCAAACAGCGGCAACTACAGCAGCAACAGCATATACAAGCAAAATCTTGACAACCTACTTTCCTCCATCGCCTCCAACACCCAAATAGATTATGCGTTTTACAATTTCACAGACGGACAGGAACCCGACAAGGTGAACGTCATCGCCCTTTGCCGGGGCGACTGGTCCGTGGATCAATGCAGGAACTGTGTCAATGACTCGACTCATGAGATTCTACAGGTTTGTCCGAACCAGAAGGAGGCAATCGGATGGTACAACGATTGTATGCTTCGTTTCTCAAACAAATCAATATTTGGTGTTGGGGATGGTCAAGTGCTTTGGCCATCTTATTTTGACAGCCGGAATTCATCGGACGTCGATGGGTTCACCGAAGCGCAGAGAACTTTGTTCAACAGACTTATGAATCAAGCTTCGTCGGGGAGTTCTACCCTGAAATTTGCGGTCGGAGATATAGCTGGACCGAGTATAGACACGAACAGGATATATGGGTTTCTCCAATGTACTCCGGATCTGTCCTCCATGGATTGTAATAATTGCCTTATACAGGTTATTAGAAGTATTAAGATTGGGAGAATAGGAGGAAGAATATTTGCGGTAAGTTGTAATTTAAGATATGAGATCTATCTTTTCTACACCGCTCCGTCGCCGCCACCCCCACCCCTGTTGCCGCCTCTGCCTCCAACACCAGAAAATAATGGCAATACTAGAACGGTTATAATCGTTGTCGTCTCCATCGTTTCAGCCATCATTCTCCTTGTTGGCATTTGCATCATTTTGAGATTGCGGAAGCAGAAGCACAAAAGACCATTAGAAAAATTTGGAAGCGTTGCTCTTGAAGATGGTACCGATGAAATTAGCAGCGTGGAGACAATTCAATTTGATTTTGAAACCATTAAAGTTGCAACAAATGACTTCTCAAGTGAAAACAAGCTTGGACAGGGTGGATTTGGAGCTGTTTACAGGGGTAAGCTACCGAATGGACAACATATTGCAGTGAAGAGACTTGCACATAATTCACAACAAGGAGATGTTGAATTTAAAAATGAAGTCCTTTTAGTAGTCAAGCTTCAGCACCGAAACTTGGTTAGGCTATTAGGATTCTGCTTGCAAGGAAGCGAAAGACTTCTCATATATGAGTTTGTATCAAATGGCAGCCTTGACCACTCCATATTTGATTTTGGGAAGCGGACACTATTAGATTGGGAAAGACGATACAAAATCATAAATGGCGTTGCACGAGGACTTCTTTATCTTCACGAGGATTCTCGCCTTCGAATTATACATCGTGATCTCAAAGCTAGCAATATTTTGTTAGATGCAGAAATGAATCCAAAGATTGCAGATTTTGGTATGGCAAGATTGTTCGAAGTAGATGAGACTCAAGGCAATACAAGTAGAATGGTGGGAACTTATGGCTATATGGCTCCTGAATATATAATGCACGGACAATTTTCAGTGAAATCAGACGTCTTTAGCTTTGGTGTTTTAGTTCTCGAAATTGTGAGTGGACAAAAAAACAATTGTTTTCGCAATGGAGAAGAAGTTGAAGATCTCTCCAGCTTTGCATGGAAAAATTGGAGGGCGGGAACAACTACAAATGTCATAGATTCCACCCTTAGTGTTGGTTCAAGGATTGAAATGATAAGATGCATTCACATTGGATTATTGTGTGTTCAAGAAAATGTAGCAAATCGACCAACAATGGCTTCAGTAGTTTTGATGCTAAGTAGTTCTTCTCTCACACTCCCAATACCTTCTGAACCTGCATTCTTCATGCATAGTAACATCTATGAATCCAACACAATGTTAAAGTCAGATGAACCTTCTGAGAATGAAGCTTCAATTAGTGAGCTCCATGCTCGCTAG 1968 41.51 MAMETSKNLLFLFFIHIFIVSNTISQPDFVAHSCSNSGNYSSNSIYKQNLDNLLSSIASNTQIDYAFYNFTDGQEPDKVNVIALCRGDWSVDQCRNCVNDSTHEILQVCPNQKEAIGWYNDCMLRFSNKSIFGVGDGQVLWPSYFDSRNSSDVDGFTEAQRTLFNRLMNQASSGSSTLKFAVGDIAGPSIDTNRIYGFLQCTPDLSSMDCNNCLIQVIRSIKIGRIGGRIFAVSCNLRYEIYLFYTAPSPPPPPLLPPLPPTPENNGNTRTVIIVVVSIVSAIILLVGICIILRLRKQKHKRPLEKFGSVALEDGTDEISSVETIQFDFETIKVATNDFSSENKLGQGGFGAVYRGKLPNGQHIAVKRLAHNSQQGDVEFKNEVLLVVKLQHRNLVRLLGFCLQGSERLLIYEFVSNGSLDHSIFDFGKRTLLDWERRYKIINGVARGLLYLHEDSRLRIIHRDLKASNILLDAEMNPKIADFGMARLFEVDETQGNTSRMVGTYGYMAPEYIMHGQFSVKSDVFSFGVLVLEIVSGQKNNCFRNGEEVEDLSSFAWKNWRAGTTTNVIDSTLSVGSRIEMIRCIHIGLLCVQENVANRPTMASVVLMLSSSSLTLPIPSEPAFFMHSNIYESNTMLKSDEPSENEASISELHAR 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77471631 77474494 + Tan0013278.1 Tan03g2366 747870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2366 655 FunFam Cysteine-rich receptor-like protein kinase 10 142 244 - -
Tan03g2366 655 Pfam Salt stress response/antifungal 150 241 IPR002902 -
Tan03g2366 655 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Tan03g2366 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2366 655 ProSiteProfiles Protein kinase domain profile. 339 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2366 655 SMART serkin_6 339 590 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2366 655 CDD STKc_IRAK 345 602 - -
Tan03g2366 655 SUPERFAMILY Protein kinase-like (PK-like) 327 641 IPR011009 -
Tan03g2366 655 ProSiteProfiles Gnk2-homologous domain profile. 138 244 IPR002902 -
Tan03g2366 655 Gene3D - 139 244 IPR038408 -
Tan03g2366 655 Gene3D - 26 130 IPR038408 -
Tan03g2366 655 FunFam Cysteine-rich receptor-like protein kinase 28 415 617 - -
Tan03g2366 655 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 131 - -
Tan03g2366 655 Pfam Protein tyrosine and serine/threonine kinase 342 606 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2366 655 Gene3D Phosphorylase Kinase; domain 1 309 414 - -
Tan03g2366 655 FunFam Cysteine-rich receptor-like protein kinase 10 299 414 - -
Tan03g2366 655 Gene3D Transferase(Phosphotransferase) domain 1 415 615 - -
Tan03g2366 655 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 107 625 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan03g2366 655 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524(InterPro)
Tan03g2366 655 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Tan03g2366 655 MobiDBLite consensus disorder prediction 636 655 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2360 Tan-Chr3:77418779 Tan03g2366 Tan-Chr3:77471631 5.60E-232 dispersed
Tan03g2361 Tan-Chr3:77431430 Tan03g2366 Tan-Chr3:77471631 7.40E-254 dispersed
Tan03g2362 Tan-Chr3:77431430 Tan03g2366 Tan-Chr3:77471631 5.60E-215 dispersed
Tan03g2363 Tan-Chr3:77443830 Tan03g2366 Tan-Chr3:77471631 1.10E-246 dispersed
Tan03g2364 Tan-Chr3:77457839 Tan03g2366 Tan-Chr3:77471631 5.40E-257 dispersed
Tan03g2366 Tan-Chr3:77471631 Tan03g2368 Tan-Chr3:77514355 6.20E-242 dispersed
Tan03g2365 Tan-Chr3:77457839 Tan03g2366 Tan-Chr3:77471631 3.50E-184 tandem
Tan03g2366 Tan-Chr3:77471631 Tan03g2367 Tan-Chr3:77483155 9.80E-171 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67379 PF07714 PK_Tyr_Ser-Thr 3.20E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2366 - - - 0.0