Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2367 ATGGAGATGGGCAGTTTGAGTTTGTTTTTGACAAGGTTTTTCTTCCTCTCCTTGGTTGTTATTACAGAATTTATGTTTACCACAACTTCTCAACCAGACTTTCCTTCTTACGCCTGTTCAGACAAAAACTACACTAACGACAGCCCTTTCAAGAAAAATCTGGACAACGTACTTGCCTCAATCTCCTTCAACTCCAAAACCGACACACGGCCAGTCGACTACGGTTTCTATAATGCCACCTCCGGTGAAGATCCCAACAGAGCCAATGCTAAGGCTCTTTGTCGTAAAGGCGTTCCCTTGGAACAATGCAGAAGTTGCGTGAATGACTCAGTCAGCAGGATTATACAAAACTGTCCAAACCAGAAGGAAGCTACAGGATGGTACAACGATTGCCAAATTCTTTACTCAAACAACTCTGTTCACGATGTTGTTCTTGGAGATGCCACTGATGAAATTAACAGTGTGGAGACAATTCAGTTTGATTTTGACACCATTAAAGATGCAACAGATGACTTCTCAAATGAAAACAAGTTGGGTCAGGGTGGATTTGGAGCTGTTTATAAGGGTAAGCTTCCGAATGGACAGCATATTGCAGTGAAGAGACTTGCACATAATTCACAACAAGGAGATGTTGAATTTAAAAATGAAGTACTTTTGGTAGTCAAGCTTCAACATCGAAACTTGGTTAGGCTATTAGGATTCTGCTTGCAAGGAAGCGAAAGACTTCTCATATATGAGTTTGTACCAAATGGCAGCCTTGACAACTTCATATTTGATTCTGAAAAGCGAACACTCTTAAATTGGGAAATACGATTCAAAATCATAAATGGCATCGCACGAGGACTTCTTTACCTTCATGAAGATTCTCGCCTTCGAATCATACATCGTGACCTCAAAACCAGCAATATTTTGTTGGATGCAAAAATGAATCCAAAAATTGCAGATTTTGGTATAGCAAAATTATTTGAATTAGATGAGACTCAAGCCAATGCAAGTAGAGTTGTGGGAACTTATGGCTATATGGCTCCAGAGTATGTAATGCTTGGACAACTTTCAGCAAAATCTGATGTCTTTAGTTTTGGTATTTTGGTTCTTGAAATTTTGAGTGGTAAAAAAAACAATTGTTTTCACAATGGAGAAAGAGTCGAAGGTCTCTCAAGCTTTCATCCAATCGATGATACTTTATCACCAGACGTGCCTACATTTGCATGGAAAAATTGGAGGGCTGGAACAACTACAAATATCATAGATTCAACACTTAATATTGGTTCAAGGATTGAAATTATGATAAGATGTATTCACATTGGATTATTGTGTGTTCAAGAAAATGTAGCAAATCGACCAACCATGGCTTCAGTGGTAGTGATGCTAAGTAGTTCTCTCCCTCTCCCTTTACCCTCTCAACCTGCCTTCTTCATGCATGGTGATGGTGATATTTATGATTCCAACCCAAAATTGAAATTAGATGGACAGTTGGAAATGATTCAAACCAGTCATTCTAAAAGCACATTTGTTCAAAGCTTTAAAGAATAA 1533 38.55 MEMGSLSLFLTRFFFLSLVVITEFMFTTTSQPDFPSYACSDKNYTNDSPFKKNLDNVLASISFNSKTDTRPVDYGFYNATSGEDPNRANAKALCRKGVPLEQCRSCVNDSVSRIIQNCPNQKEATGWYNDCQILYSNNSVHDVVLGDATDEINSVETIQFDFDTIKDATDDFSNENKLGQGGFGAVYKGKLPNGQHIAVKRLAHNSQQGDVEFKNEVLLVVKLQHRNLVRLLGFCLQGSERLLIYEFVPNGSLDNFIFDSEKRTLLNWEIRFKIINGIARGLLYLHEDSRLRIIHRDLKTSNILLDAKMNPKIADFGIAKLFELDETQANASRVVGTYGYMAPEYVMLGQLSAKSDVFSFGILVLEILSGKKNNCFHNGERVEGLSSFHPIDDTLSPDVPTFAWKNWRAGTTTNIIDSTLNIGSRIEIMIRCIHIGLLCVQENVANRPTMASVVVMLSSSLPLPLPSQPAFFMHGDGDIYDSNPKLKLDGQLEMIQTSHSKSTFVQSFKE 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77483155 77486047 + Tan0020175.1 Tan03g2367 747871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2367 510 Pfam Salt stress response/antifungal 39 137 IPR002902 -
Tan03g2367 510 Gene3D Transferase(Phosphotransferase) domain 1 248 462 - -
Tan03g2367 510 ProSiteProfiles Gnk2-homologous domain profile. 32 140 IPR002902 -
Tan03g2367 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2367 510 Pfam Protein kinase domain 173 380 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2367 510 ProSitePatterns Protein kinases ATP-binding region signature. 178 200 IPR017441 GO:0005524(InterPro)
Tan03g2367 510 CDD STKc_IRAK 178 456 - -
Tan03g2367 510 ProSiteProfiles Protein kinase domain profile. 172 471 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2367 510 SMART serkin_6 172 461 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2367 510 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 92 472 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan03g2367 510 FunFam Cysteine-rich receptor-like protein kinase 28 248 463 - -
Tan03g2367 510 SUPERFAMILY Protein kinase-like (PK-like) 157 474 IPR011009 -
Tan03g2367 510 FunFam Cysteine-rich receptor-like protein kinase 10 137 247 - -
Tan03g2367 510 Gene3D - 32 139 IPR038408 -
Tan03g2367 510 Gene3D Phosphorylase Kinase; domain 1 140 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2367 Tan-Chr3:77483155 Tan03g2369 Tan-Chr3:77524726 4.10E-209 dispersed
Tan03g2366 Tan-Chr3:77471631 Tan03g2367 Tan-Chr3:77483155 9.80E-171 tandem
Tan03g2367 Tan-Chr3:77483155 Tan03g2368 Tan-Chr3:77514355 4.40E-203 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67380 PF00069 Pkinase 6.00E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2367 - - - 0.0