Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2370 ATGGATGTGTCACTCAAGTCAAGTCAGGAGGAGGCCTCAGAATTTTCCAAGGGAATGACAAAAACGCGTGAGATTAATAAGGAGATTAGAGACCGCCGTAGCTATTCATTTTTGTTGTTTACAAACCAAAATCGATTTCACAGAAGGAAAAAGGAGATCATGGGCAGTTTGGCCGGAAGGGTTTTCCTCCTGATCTCCTTGGGTGTTATTGCACAAATTGAGAGACTAATGGCAAGACTTGGTACTAATAATACCACTACAACCGTCATAATTGTTGTTTTTTCTACCCTTCCTGTTTCCATACTCATCCTCTTTGTCTTTATCTTTTCGAGAAGGAGGTACCGAAAACAAAAGCTCAAGAGGATATTAGAAACTGCTGAATCCACAAATGAAATCATCAGCATTGAGATGTTGCAATTTGATTTCGAAACTATTAAGCTAGGAACAAATGAATTCTCAAGTGAAAATAAGATTGGACAAGGTGGATTTGGAGCCGTTTACAAGGGTAAGCTACCTAATGGACGACAAATAGCCGTGAAAAGGCTTGCAAAGGATTCACAGCAAGGAGATATAGAATTTAGAAACGAAGTATTGTTGGTAGCCAAACTTCATCATAGAAACTTGGTTAGGCTGTTGGGATTTTGCTTGCAAAAAAATGAAAGACTTCTCATATATGAGTTTGTTCAAAATGCCAGCCTTGACCATTTCATATTTGATTTTGAGAACCGGATACTTTTAGAATGGGAAAAGCAATACAAAATTATAAATGGCATTGCACGAGGACTTCTTTATCTTCATGAAGATTCTCGTCTTCTAATTATTCATCGTGATCTCAAAGCTAGTAATATTTTGTTGGATGAGAACATGAATCCAAAAATTGCGGATTTTGACACAGCAAGAATGTTTGGAGTAGATGAGACTCATGGCAATACAAATAGAATTGCGGGAACCTATGGGTATATGACTCCAGAGTATGCATTAGAGGGACAATTTTCAGTAAAATCAGACATATTTAGTTTTGGTGTTTTGATTCTCGAAATTATAAGTGGCCAAAAAAATATTTGTTTTCGCAATGGACAAAAAGTGGAAGATATCTCGAGCTTTGCATGGAAAAACTGGAGGGCAGGAACACCTACCAATGTGATAGATCCAAAACTAAGGGATGGTTCTACCGTTGAAATGGTGAGATGCATCCATATTGGACTATTGTGTGTTCAAGAGAATGCAGTAGATCGACCAACAATGACTTCAGTAATTCTAATGCTCAGTAGTTTCTCTCTCACTCTTCCCGTACCCTCTAAACCTGCATTCTTTATGCACAATACTACTGAAGAATCTAACACTGATCACTGGTTGGAAATGGCTCAACCTGGTCATTCCAAAAGCACACTATCCAAAGCATCACTTGCTGAAATTTCAATTACTGAGCTCCATCCTCGTTAG 1443 38.18 MDVSLKSSQEEASEFSKGMTKTREINKEIRDRRSYSFLLFTNQNRFHRRKKEIMGSLAGRVFLLISLGVIAQIERLMARLGTNNTTTTVIIVVFSTLPVSILILFVFIFSRRRYRKQKLKRILETAESTNEIISIEMLQFDFETIKLGTNEFSSENKIGQGGFGAVYKGKLPNGRQIAVKRLAKDSQQGDIEFRNEVLLVAKLHHRNLVRLLGFCLQKNERLLIYEFVQNASLDHFIFDFENRILLEWEKQYKIINGIARGLLYLHEDSRLLIIHRDLKASNILLDENMNPKIADFDTARMFGVDETHGNTNRIAGTYGYMTPEYALEGQFSVKSDIFSFGVLILEIISGQKNICFRNGQKVEDISSFAWKNWRAGTPTNVIDPKLRDGSTVEMVRCIHIGLLCVQENAVDRPTMTSVILMLSSFSLTLPVPSKPAFFMHNTTEESNTDHWLEMAQPGHSKSTLSKASLAEISITELHPR 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77530275 77533398 + Tan0013755.1 Tan03g2370 747874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2370 480 FunFam Cysteine-rich receptor-like protein kinase 10 112 227 - -
Tan03g2370 480 SUPERFAMILY Protein kinase-like (PK-like) 140 451 IPR011009 -
Tan03g2370 480 Gene3D Phosphorylase Kinase; domain 1 113 227 - -
Tan03g2370 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2370 480 CDD STKc_IRAK 158 422 - -
Tan03g2370 480 FunFam Cysteine-rich receptor-like protein kinase 28 228 430 - -
Tan03g2370 480 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 48 438 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan03g2370 480 ProSitePatterns Protein kinases ATP-binding region signature. 158 180 IPR017441 GO:0005524(InterPro)
Tan03g2370 480 Pfam Protein kinase domain 153 361 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2370 480 ProSiteProfiles Protein kinase domain profile. 152 426 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2370 480 SMART serkin_6 152 426 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2370 480 Gene3D Transferase(Phosphotransferase) domain 1 228 429 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2370 Tan-Chr3:77530275 Tan05g3149 Tan-Chr5:83487339 3.50E-117 dispersed
Tan03g2369 Tan-Chr3:77524726 Tan03g2370 Tan-Chr3:77530275 8.40E-149 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67383 PF00069 Pkinase 2.40E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2370 - - - 0.0