Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2374 ATGATCTTTGTAAAGTATAAAAGAAGAAAATCTAAGTTGCATTCATCTCTTGGCGTTCCGAAGGGTGATGGGAAGTTGAAAATTGAGGATAACGCAAAAGAGACCCTCACCTTGCCAATTAGTTCAGTCGTGATGGTTGAAAAGTTTGACAATGAAGATTTTATAGCCAATATCGGAAGCTGTTGTTATGATGTTTCTGTAATTCTTTCGTTAGTTTGCGCCATCCGGCCAGTCTTTGTCTACCACTACTGCATATATGATAGAGGGAACTTCACCAGTGACAGCACCTATAAGGCCAACCTCAATCATGCCCTCTCCTCCCTTGCTACTGCCAAAGATACAAGCAATGGCTTTTACAATTTTTCATACGGTCAAAGCTCAGACACGGCCAATGTTATCGGACTCTGTCGAGGCGATGTGAAGCCCAATGTATGTCGAAGCTGCCTCAATGACTCTGTACATCTTCTCACACAGCGATGTCCTCACCAGAAAGAAGCAATTGGGTGGTATGATAACTGCATGCTGCGCTATTCAAGTCGTCCCATATTTGGTGCTATGGACACTGAACCCTCGTTCTTAATGTGGGCAACAACCAATGTGACGGAGGAAGTTATATTCAGCCAGAAGTTGGAAACATTGCTGGATAGCTTGAAAAAGAATGCCATTTCAGGTGGTTCTCTACAGAAGTATGCAACTGGAGACATATCTGCACAAGGGTTATGGAGAATATATGGGCTTTTGCAGTGCACACCTGATCTGTCTCAGTTACAATGTGATGAGTGCTTAGTTTCAGCGTTTCGAGTAATTCCACCATGTTGTAGCGAAGGAATGAGAGTTTTTTCACCCAGCTGTAACGTTAGATATGAGATGACCCTCTTCTTTGAGCCTTCTGCTGATCCACCACCGCCACCTCCACCGCTACCACCACCGCCATTTGTATTTACATCTCCAACTAGTACCACGTCTACAGAAGGAAAGAAGTTCACAACACAAACTGTCATTATCATAGTTCTTTCAGTTATGGCTCTTTTAGTATTATTGACCATCGGCATCTACATCTTTTTGAGATCCAGGAAGTTGAGGGAAAGACTTGAGACTAATGACGATGATATTAGTAGCTCTATGGACTTCTTGCAATATGACTTTAAGACGATCAAAGATGCAACGGATGACTTTTCTACTACAAATAAACTTGGACAAGGTGGATTTGGTACCGTCTATAAGGGTAAACTTTTCAATGGACAAGAAGTGGCTGTTAAAAGGCTAGCTCAAGGTTCTCAACAGGGAGACCTCGAATTTAAGAATGAAGTTTTATTGGTTGCTAAGCTGCAACACCGGAATCTGGTTCGACTTCTTGGCTTTTGTTTCGAGAGAAGCGAAAGGCTCCTCATCTATGAGTTTTTACCTAATTCAAGCCTAGATCGCTTCATATTTGATCCAATTCAACGTCAAGATTTGGACTGGCCAAGACGTTATAAAATTATAGTAGGCATTAGTCGCGGCCTCATGTATCTACATGAAGATTCTCAATTCAAAGTCATCCATCATGATCTCAAACCTAGTAATATATTATTAGATGCAGAGCTCAATCCAAAAATTACTGACTTTGGAATGGCAAGATTGTGTTCGTTCAGTGGGTCTAATGGCGATACAAGTAAAATTAAGGGAACATATGGATATATGGCTCGAGAGTATGCAATGTATGGGCATTTCTCAGTGAAGTCAGATGTGTTTAGTTTTGGTGTGCTTCTTCTAGAGATCGTGAGTGGCCAAAAGAATAGTTGTTTTCGAGATGACAACAATATGGAACACCTTTTGAGCTGTACATGGGAAAACTGGACGAAAGGGACAATCACAAATATAATAGATCCAATATTGAGTGGAACTTGCTTCGATGAAATCTTGAAATGCATTCATCTAGGGTTACTATGTGTTCAAGAAAATGTAGCTAGCAGACCAACCATGGCTTCAGTTGTTCTTATGCTCAATAGCAACTCCTCTACTCTTCCTCTACCATCACGGCCTGGATTTTTGCTGCATAGTAAGATCAATTCCTTACCATATCCATTTGAAATTTGCAGCAAAAGCTTGGCAATGAAGAATCTTATGGCCAATATTGTACGCCAACATTATATTTATATGGCATTCTTGCTTCCTTTTTCTTTTTTTTTCTTTGCCAGAATTTGTGCTACCCAGCCAGTCTTAGGCAACCAGGTCTGCATGTATAAAGTAGGGAACTTCACCAGCAACAGCACCTACAAGACCAATCTCGATCATGTCCTCTCCTCCATTGCCACTACCAAAGATACTGGCAATGGCTTTTACAATTTTTCCTATGGTCAAGGCTCAGACGCAGCCAATGCTATTGGGCTCTGCCGAGGAGATACGAAGCCTGATGTTTGTCGAAGCTGCCTTAATGACTCTATATATTTTCTCACACAGCAATGTCCTAATCAGAAAGAAGCAATTGGGTGGTATGATAACTGTATGCTACGCTATTCAAGTCGTCCCATATTTGGTGCAATGGAAGCTGAACCCAGTTTCCTATGGGCGATGAAAGACTACCCTGTAATACAGGAAGATCTGTTCAGGCAGAACCTGAGGACATTGCTGGATAGCTTGAAAGATCATGCTTCTTCAGATAGTTCTTTACAGAAGTTTGCAGCTGGAGATATATTTGGAGAAGGGTTGGGGAGGATATATGCACTTCTGCAGTGCACACCTGATTTGTCTCAACTACAATGTGATGCCTGCTTAGATTCAGCGTTTAAATCAATTCCACCATGTTGTAAAATAACCTTGAATTATTTTTCACCCAGCTGTAACGTTAGATATCGGTTGTCCCCCTTCTTTGAGCCTTCTGCTGATTTGCCACCACCGGCGCCGCTAATTTTTGTTCCTTCAAGAAATACCACGTTTTCAGAAGCGAAGAAGAAGAACACCATTAGAACCACCATTGTAATAGTTCTCCCATTTGTGGCTCTCTTGGTTTTAGCCATTGTCATCTACACCTTTTTGAGATCCAGAAAGTTGAGGAAAAGATTTGAGACTAGTGATGATGACATTAGCCCCTTGAATTTCTTGCATTATGACCTCAAGACGATTAGAGATGCAACAGATGACTTTTCGATTTCAAATAAACTTGGACAAGGTGGATTTGGTATTGTTTTTAAGGGTAAGCTTTTCAATGGACAAGAAGTGGCCGTGAAAAGGCTAGCTCAAGGCTCGCAACAGGGAGACTTAGAATTTAAGAATGAAGTTTTACTGGTTGCTAAGCTGCAGCACCGGAATCTGGTTCGACTTCTTGGCTTTTGCTTCGAGAGAAATGAAAGGCTCCTCATTTACGAGTTTTTACTTAATTCGAGCCTAGATCGTTTGATATTTGATCCAATTCAACGCCAAAATTTAGACTGGTCAAGACGTCACAGAATTATAGTTGGCATCAGTCGTGGCCTCATGTATCTACACGAAGGTTCTCGATTCAAAGTCATCCACCATGATCTTAAATCTAGTAATATTTTATTGGATTCAGAGCTAAATCCAAAAATCACTGATTTTGGAATGGCAAGGTTGTGTTCAATCAATCAATCTCATGGTGATACGAATCACGAGTGGCCAAAAGAACAGTTGCTTTCAAGATGGGGAAAGTACAGAGCACCTTCTAAGCTATGGAATGTCACAGCCATCATAGACCCGATTTTGGCTGGAGCTTGCATTGATGAAATCGTGAGATGCATCCATCTCGGATTACTTTGTGTTCAAGAAGATGTAGCTAGCAGACCGACCATGTCTTCAGTTGTTCTCATGCTCAATAGCAACTCCTTCACTCTTCCTGTACCTTCGCGACCCGGTTTTTTGCTACAGAGCAATACCTCAAACTTGCCGCAGCATCTTGATACCACAGGAGGATCACGGCATAGTCTATCTGAGAGCCTTTATATTGAAGAAGAATCAGAAAATCAGTATTCAACAATTGATCTTCAAGCTTACTAG 3993 41.32 MIFVKYKRRKSKLHSSLGVPKGDGKLKIEDNAKETLTLPISSVVMVEKFDNEDFIANIGSCCYDVSVILSLVCAIRPVFVYHYCIYDRGNFTSDSTYKANLNHALSSLATAKDTSNGFYNFSYGQSSDTANVIGLCRGDVKPNVCRSCLNDSVHLLTQRCPHQKEAIGWYDNCMLRYSSRPIFGAMDTEPSFLMWATTNVTEEVIFSQKLETLLDSLKKNAISGGSLQKYATGDISAQGLWRIYGLLQCTPDLSQLQCDECLVSAFRVIPPCCSEGMRVFSPSCNVRYEMTLFFEPSADPPPPPPPLPPPPFVFTSPTSTTSTEGKKFTTQTVIIIVLSVMALLVLLTIGIYIFLRSRKLRERLETNDDDISSSMDFLQYDFKTIKDATDDFSTTNKLGQGGFGTVYKGKLFNGQEVAVKRLAQGSQQGDLEFKNEVLLVAKLQHRNLVRLLGFCFERSERLLIYEFLPNSSLDRFIFDPIQRQDLDWPRRYKIIVGISRGLMYLHEDSQFKVIHHDLKPSNILLDAELNPKITDFGMARLCSFSGSNGDTSKIKGTYGYMAREYAMYGHFSVKSDVFSFGVLLLEIVSGQKNSCFRDDNNMEHLLSCTWENWTKGTITNIIDPILSGTCFDEILKCIHLGLLCVQENVASRPTMASVVLMLNSNSSTLPLPSRPGFLLHSKINSLPYPFEICSKSLAMKNLMANIVRQHYIYMAFLLPFSFFFFARICATQPVLGNQVCMYKVGNFTSNSTYKTNLDHVLSSIATTKDTGNGFYNFSYGQGSDAANAIGLCRGDTKPDVCRSCLNDSIYFLTQQCPNQKEAIGWYDNCMLRYSSRPIFGAMEAEPSFLWAMKDYPVIQEDLFRQNLRTLLDSLKDHASSDSSLQKFAAGDIFGEGLGRIYALLQCTPDLSQLQCDACLDSAFKSIPPCCKITLNYFSPSCNVRYRLSPFFEPSADLPPPAPLIFVPSRNTTFSEAKKKNTIRTTIVIVLPFVALLVLAIVIYTFLRSRKLRKRFETSDDDISPLNFLHYDLKTIRDATDDFSISNKLGQGGFGIVFKGKLFNGQEVAVKRLAQGSQQGDLEFKNEVLLVAKLQHRNLVRLLGFCFERNERLLIYEFLLNSSLDRLIFDPIQRQNLDWSRRHRIIVGISRGLMYLHEGSRFKVIHHDLKSSNILLDSELNPKITDFGMARLCSINQSHGDTNHEWPKEQLLSRWGKYRAPSKLWNVTAIIDPILAGACIDEIVRCIHLGLLCVQEDVASRPTMSSVVLMLNSNSFTLPVPSRPGFLLQSNTSNLPQHLDTTGGSRHSLSESLYIEEESENQYSTIDLQAY 1330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77551222 77562076 + Tan0022650.1 Tan03g2374 747878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2374 1330 FunFam Cysteine-rich receptor-like protein kinase 10 190 293 - -
Tan03g2374 1330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1163 1175 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2374 1330 ProSiteProfiles Protein kinase domain profile. 392 669 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2374 1330 ProSiteProfiles Gnk2-homologous domain profile. 735 838 IPR002902 -
Tan03g2374 1330 ProSitePatterns Protein kinases ATP-binding region signature. 398 420 IPR017441 GO:0005524(InterPro)
Tan03g2374 1330 Pfam Protein tyrosine and serine/threonine kinase 394 659 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2374 1330 ProSiteProfiles Gnk2-homologous domain profile. 188 293 IPR002902 -
Tan03g2374 1330 Gene3D Phosphorylase Kinase; domain 1 1017 1117 - -
Tan03g2374 1330 Gene3D Phosphorylase Kinase; domain 1 366 467 - -
Tan03g2374 1330 ProSiteProfiles Gnk2-homologous domain profile. 843 950 IPR002902 -
Tan03g2374 1330 FunFam Cysteine-rich receptor-like protein kinase 28 468 670 - -
Tan03g2374 1330 ProSiteProfiles Protein kinase domain profile. 1042 1325 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2374 1330 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 77 182 - -
Tan03g2374 1330 Pfam Protein kinase domain 1043 1206 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2374 1330 Gene3D Transferase(Phosphotransferase) domain 1 1120 1277 - -
Tan03g2374 1330 Pfam Salt stress response/antifungal 84 179 IPR002902 -
Tan03g2374 1330 Pfam Salt stress response/antifungal 860 946 IPR002902 -
Tan03g2374 1330 Pfam Salt stress response/antifungal 740 835 IPR002902 -
Tan03g2374 1330 Pfam Salt stress response/antifungal 199 290 IPR002902 -
Tan03g2374 1330 SUPERFAMILY Protein kinase-like (PK-like) 1016 1270 IPR011009 -
Tan03g2374 1330 CDD STKc_IRAK 398 663 - -
Tan03g2374 1330 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1221 1285 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan03g2374 1330 SMART serkin_6 392 669 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2374 1330 SMART serkin_6 1042 1276 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2374 1330 FunFam Cysteine-rich receptor-like protein kinase 10 355 467 - -
Tan03g2374 1330 FunFam Os07g0541700 protein 1118 1205 - -
Tan03g2374 1330 ProSitePatterns Protein kinases ATP-binding region signature. 1048 1070 IPR017441 GO:0005524(InterPro)
Tan03g2374 1330 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 733 838 - -
Tan03g2374 1330 Gene3D - 736 837 IPR038408 -
Tan03g2374 1330 Gene3D - 77 181 IPR038408 -
Tan03g2374 1330 Gene3D - 189 293 IPR038408 -
Tan03g2374 1330 Gene3D - 850 950 IPR038408 -
Tan03g2374 1330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2374 1330 SUPERFAMILY Protein kinase-like (PK-like) 372 662 IPR011009 -
Tan03g2374 1330 Gene3D Transferase(Phosphotransferase) domain 1 468 669 - -
Tan03g2374 1330 FunFam Cysteine-rich receptor-like protein kinase 10 1006 1117 - -
Tan03g2374 1330 ProSiteProfiles Gnk2-homologous domain profile. 79 182 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2374 Tan-Chr3:77551222 Tan05g3161 Tan-Chr5:83559974 5.40E-269 dispersed
Tan03g2373 Tan-Chr3:77547937 Tan03g2374 Tan-Chr3:77551222 3.10E-116 tandem
Tan03g2374 Tan-Chr3:77551222 Tan03g2375 Tan-Chr3:77562423 2.30E-66 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67387 PF07714 PK_Tyr_Ser-Thr 1.10E-42 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2374 - - - 0.0