Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2383 ATGGCTGAGGATTTTCAAGCTGCTATTTGCGGCGATAATTGGTGGAGCTCTTCAAGAAGCATGTTGGTCGCCGTCGGTGGTTTGTCCCCCTGTTCTGTCGGCATCGGCGACCTTGGTTGGCCGCCGGCCGATGATTTTGTGGACATCAAGCCCAAGTCCGCCACTGATTCCGACCACAACAACAACTCCATGCTTTTTCAAGACTATTCCACCTTCCAAATGATGGGTTTTGCTCTTTCTTCTTCCACCACCTCCGATCACTGGAACCAATCTGATGATTTGCTTTGTGGCGGTGGACGAGGTGAGAGCAACTTCAATTCGAAGGGAATTGAGAGTTACAATGATGAAGAAATTAGAAAAGATTGGAGTTCAACGAAATATTTCTCTTGTGATACGAGCTCCATAAATGGATTGAAAGAAGGAGATCATGAAGATTATAATTTGTTGGAAGAAAATCGTTTGAATTCTATTAACTGTTCATCCACGAGTAGCAGAACCAGTTGCCAGGGTTTATTTCCTCTTGATTCAACTTTATATGGATACCCTTCGGCCTCTTCAACAAAGTTACTCCAAAGTTTATACGATGATCAACAACCACCACATGCCCACTCCCTTTTCAACACAACCCCTTCCATTAACACTAATTCAACTTTCCCCACAAACCCAAATGACTTATCTTTATCCTCAACTCCTAATTTTTCTTCTAATTACATTAAACCCTCACTCCCAAAGCCCCCTCAGCCTCCGCCTGTTTCTGCTGGCTTGCACTTCACCAATAACACTCCCTTTTGGAATGCCTCCGCCGCGGCTTCTTCCACTGACATTCGACAGGGCATTGCAGCTTCCTTACTTGAAGAGAAGAACCCCAAATCCCAAAATAATTCCCTTGTTTTGAAGCCTATTCATAGTGGTAATTGTGAAGATGGTCAAGAACCAAAGAAAGGTAGTGTAACTGAATCAGTACCAGTGTTCAAAAGGCCTCGAATTGAAACTCCTTCACCATTGCCAACATTTAAGGTGCGGAAAGAGAAGCTAGGGGACCGAGTCACTGCCCTTCAACAACTGGTTTCACCGTTTGGAAAGACTGATACTGCCTCCGTTCTACACGAAGCCATTGAGTACATCAAATTCCTCCACGATCAAGTTTTAAGTACTCCATATATGAAGAGCAACAATGGAATAACACCCATCCAACACCAACAGGTATGTGAAAAAGCAGACCCAGATTGGCCAAAACAAGATCTGAGAAGCAGAGGGCTTTGTTTGGTGCCGATTTCAAGCACATTCCCAGTGACGAATGCAGCGACGGCGGATTTCTGGACACCGACGTTCGGCGGAACATTCCGGTGA 1350 44.89 MAEDFQAAICGDNWWSSSRSMLVAVGGLSPCSVGIGDLGWPPADDFVDIKPKSATDSDHNNNSMLFQDYSTFQMMGFALSSSTTSDHWNQSDDLLCGGGRGESNFNSKGIESYNDEEIRKDWSSTKYFSCDTSSINGLKEGDHEDYNLLEENRLNSINCSSTSSRTSCQGLFPLDSTLYGYPSASSTKLLQSLYDDQQPPHAHSLFNTTPSINTNSTFPTNPNDLSLSSTPNFSSNYIKPSLPKPPQPPPVSAGLHFTNNTPFWNASAAASSTDIRQGIAASLLEEKNPKSQNNSLVLKPIHSGNCEDGQEPKKGSVTESVPVFKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVLSTPYMKSNNGITPIQHQQVCEKADPDWPKQDLRSRGLCLVPISSTFPVTNAATADFWTPTFGGTFR 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77601358 77604198 + Tan0010985.2 Tan03g2383 747887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2383 449 CDD bHLH_AtbHLH_like 335 382 IPR045239 -
Tan03g2383 449 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 329 378 IPR011598 GO:0046983(InterPro)
Tan03g2383 449 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 184 428 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Tan03g2383 449 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 339 383 IPR036638 GO:0046983(InterPro)
Tan03g2383 449 FunFam Transcription factor bHLH123 family 339 402 - -
Tan03g2383 449 MobiDBLite consensus disorder prediction 200 250 - -
Tan03g2383 449 Gene3D - 339 395 IPR036638 GO:0046983(InterPro)
Tan03g2383 449 MobiDBLite consensus disorder prediction 200 240 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2383 Tan-Chr3:77601358 Tan05g3182 Tan-Chr5:83865952 1.00E-41 dispersed
Tan03g2382 Tan-Chr3:77601358 Tan03g2383 Tan-Chr3:77601358 6.10E-265 tandem
Tan03g2383 Tan-Chr3:77601358 Tan03g2384 Tan-Chr3:77601358 1.50E-199 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2383 - - - 0.0