Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2390 ATGGGTAGTAATTGCAGAAAGGTTGTTGGGTTTCTTCAATTCTTTGTCATTTCATTCTTCCTCTGTTCTTCTCCTCTGTTTTGTGACGCTGCAAATTCAATCACGAGGGGCAGAGATTTAAGAGACAGTGCTAATGAAACTCTCATATCCGAAAATGAGTCCTACGAGCTGGGGTTCTTCAGTCCCAAAAATTCTTCTTCACGATATGTTGGTATATGGTATCACAAGATCGACGAACAGTCCGTTATTTGGGTTGCAAATAGAGATAAACCACTTCTTAATAGAGATGGGGTTTTGAAAATCGGAGACGACGGGAACTTGGTCGTTCTAGATGGCAACAACGTCTCTGTTTGGACAAGCAATATCACAGCGAATGCGTCTGATCCGAGGAACTTAACTCTGCATCACAATGGAGAATTGATTCTCTCGAGCGACGACGACCCGTCGAAAGTCCATTGGAGCAGCTTCGAACACCCCACAGATACATTTCTTCCGAATATGGTGGTGCGAGTGAGATCAGATATGGGTGCAAAACGGATTTTTATGTCGTGGAAGTCAGAGACAAATCCGGCCGTCGGAAATTACTGTCTGGGTGTGGATCCTCGTGGAGCCGTACAGATTATCATTTGGAATGGGAAAAATCGATGGTGGCGAAGCGGCCACTGGGATAGGCAGATTTTTTCTGGGATTCCAACTATGCGTTCTACGTCTTTGTACGGTTTCAAGGTTACCCCCGAAAATGGAAATGTAAGTGTAACTTTTCATCCATTGAATGATTCTGATAAGCTGAAATTTCAAATACGGTGGGATGGTAAAGAAGCACAGCAACGATGGAACGAAGCGAATCGGGTATGGGAAACTATTCGTTTACTGCCTTCTAACGATTGCGATTTCTATAATTTTTGTGGGGATTTTGGGATTTGCTCTGAAACAAGTCGCCCCAAGTGTAGTTGCCCTCAAGGGTTTATACCAAAAAACGACGATCAATGGAAGAGAGGGATTTGGTCGGATGGGTGTCAGAGGAAGACTCCATTACTTCAGCAGAGGATGAACAGTAATCCGAATGGCACTGTTGAAGATGGTGAACAAGATGGGTTTGCGGCTGTACAGTTTGTGAAATTGCCCGATTTCATAACTACGGTATCTGTGGATTCTTGTAGAGATAGATGTGCGAACAGTTCTTCGTGTCTTGCATATTCTGATGCTCCTGGAATTGGGTGCCTTACCTGGGATGGACCTTTAATTGATATTCAGAGATTTGATGGTGTTGGGAATACTTTGAACATTCGTCTCGCTCATTCTGATTTGATATCTGTAGATAACGAGAGCAAATTGTCGACCTGGGTGATAGTATTGATATGTTTTGGGGGAGCAGCTGCCATAGCCATTCTAGCATTGCTGCTATGGAAATTCAGAGGCAAAATGAAAGCTCCACCAGCTTCTGCTTCGAGTAAACCTCAGAACAACACTGAAGTACCAATGTTTGACCTGAGCAAGAGCAGAGAATTTTCAGCAGAGCTTTCAGGGCCATACGATTTAGGCAGAGAAGGCGAACAATTGAGCGGACCAGATTTGCCAATGTTCAATTTCAACTGCATAGCTGTGGCTACTGATAATTTTTCCGAGGAAAACAAGCTTGGCCAGGGAGGTTTTGGCCCAGTATACAGGGGAAAGCTTCCATGTGGACAAGAAATTGCTGTGAAGAGGCTCTCAGTCCGGTCTGGTCAAGGTCTAGAAGAGTTTAAAAATGAGATTATACTGATAGGAAAGTTGCAGCATCGGAACCTCGTCAGACTGTTGGGCTATTGCATTCAAGGAGAGGACAAGATGCTGCTCTATGAATATATGCCAAATAAAAGCTTGGATTGGTTTCTTTTTGATCCAAATAAGCAGGCACTATTGGATTGGAAAAAACGGTTATCAATCATCGAGGGAATTGCTCGAGGACTGCTATATCTTCATCGAGACTCGAGACTTCTTATTATTCATAGAGACTTGAAAGCTAGCAACATTTTGCTAGACGAAGACATGAATCCCAAGATATCAGATTTTGGCATGGCTAGAATATTTGGTGGAAACCAAAATGAGGCAACAAATACAATTCGAGTTGTTGGCACATAG 2121 43.23 MGSNCRKVVGFLQFFVISFFLCSSPLFCDAANSITRGRDLRDSANETLISENESYELGFFSPKNSSSRYVGIWYHKIDEQSVIWVANRDKPLLNRDGVLKIGDDGNLVVLDGNNVSVWTSNITANASDPRNLTLHHNGELILSSDDDPSKVHWSSFEHPTDTFLPNMVVRVRSDMGAKRIFMSWKSETNPAVGNYCLGVDPRGAVQIIIWNGKNRWWRSGHWDRQIFSGIPTMRSTSLYGFKVTPENGNVSVTFHPLNDSDKLKFQIRWDGKEAQQRWNEANRVWETIRLLPSNDCDFYNFCGDFGICSETSRPKCSCPQGFIPKNDDQWKRGIWSDGCQRKTPLLQQRMNSNPNGTVEDGEQDGFAAVQFVKLPDFITTVSVDSCRDRCANSSSCLAYSDAPGIGCLTWDGPLIDIQRFDGVGNTLNIRLAHSDLISVDNESKLSTWVIVLICFGGAAAIAILALLLWKFRGKMKAPPASASSKPQNNTEVPMFDLSKSREFSAELSGPYDLGREGEQLSGPDLPMFNFNCIAVATDNFSEENKLGQGGFGPVYRGKLPCGQEIAVKRLSVRSGQGLEEFKNEIILIGKLQHRNLVRLLGYCIQGEDKMLLYEYMPNKSLDWFLFDPNKQALLDWKKRLSIIEGIARGLLYLHRDSRLLIIHRDLKASNILLDEDMNPKISDFGMARIFGGNQNEATNTIRVVGT 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77627159 77631220 - Tan0016437.3 Tan03g2390 747894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2390 706 SMART blect_4 39 159 IPR001480 -
Tan03g2390 706 ProSiteProfiles Protein kinase domain profile. 540 706 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2390 706 CDD PAN_AP_plant 359 432 - -
Tan03g2390 706 SMART ntp_6 361 431 IPR003609 -
Tan03g2390 706 CDD B_lectin 43 159 IPR001480 -
Tan03g2390 706 Gene3D Transferase(Phosphotransferase) domain 1 616 706 - -
Tan03g2390 706 ProSiteProfiles PAN/Apple domain profile. 361 432 IPR003609 -
Tan03g2390 706 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544(InterPro)
Tan03g2390 706 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 190 IPR036426 -
Tan03g2390 706 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 156 - -
Tan03g2390 706 Gene3D - 28 156 IPR036426 -
Tan03g2390 706 Pfam Protein tyrosine and serine/threonine kinase 543 692 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2390 706 Pfam D-mannose binding lectin 82 185 IPR001480 -
Tan03g2390 706 Pfam PAN-like domain 362 417 IPR003609 -
Tan03g2390 706 Gene3D Phosphorylase Kinase; domain 1 515 615 - -
Tan03g2390 706 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 616 706 - -
Tan03g2390 706 ProSiteProfiles EGF-like domain profile. 292 328 IPR000742 -
Tan03g2390 706 SUPERFAMILY Protein kinase-like (PK-like) 524 706 IPR011009 -
Tan03g2390 706 CDD EGF_CA 294 326 - -
Tan03g2390 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2390 706 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 511 615 - -
Tan03g2390 706 PIRSF SRK 4 706 IPR024171 GO:0004674(InterPro)
Tan03g2390 706 SMART serkin_6 540 703 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2390 706 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 35 706 - -
Tan03g2390 706 ProSiteProfiles Bulb-type lectin domain profile. 33 155 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2388 Tan-Chr3:77627159 Tan03g2390 Tan-Chr3:77627159 0.00E+00 dispersed
Tan03g2390 Tan-Chr3:77627159 Tan11g2173 Tan-Chr11:56792933 1.00E-157 dispersed
Tan03g2389 Tan-Chr3:77627159 Tan03g2390 Tan-Chr3:77627159 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67390 PF07714 PK_Tyr_Ser-Thr 3.90E-31 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2390 - - - 0.0