Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g2483 | ATGGACGAAGAGGCTAATTCTTGGCTTAGGAGAACGAAGTTTTCTCACACGGTTTATCATCGATGGGACTCATTAAGATTGAACCCTGTTCCTTTCATCATCGAACCACCTCGCAATTCCGGCTTGAAATCGAGGCCTCAGTCAACTTCATCTCCCCAGAAACTGAATCCTGATATTTCGAAGATTCAACGAAGTTTCATATCCAACAAGCAGAGGTCTCTGTCTCCTCTTCCCGAGAGCAACCTCTCTGAAGTTTTCGAGGAAGCAAAATCCGCGAGTAAGAGATTCTCAACTCCAACTCCTCGACTTAGAGAGCGAACGAAGGAATTCAAGAAGAAGCTATTCAACAAGGAACCTCAAGATTCAAAATCGGCCAATTTCAAGCCATCGTTGAATACCAGTCCTCTGAAACACCTAGCCACCGCGAAAGGGAGTGATAAGTCTAAGTTCCGGAGGGACTCATCCTGGACCAAGTATTTTGAGTCCGGAGGTGGAAGAGTCACCGCCGTGGAAACGGCCGATGACTGGAGTGTTGATCTCTCCGAGTTGTTTCTTGGGTTAAGGTTTGCTCATGGAGCTCACAGTCGTCTTTATCATGGAAAATACAAGGAGGAACCTGTTGCTGTTAAAATTATTCGAGTGCCTGAGGACGACGAAAATGGAGTGCTTGGTTCTCGATTGGAGAAGCAATTCACCAGAGAAGTTACTCTTTTATCTCGTCTCCATCATCCGAATGTTATAAAGTTTGTAGCGGCCTGTAGGAAGCCGCCAGTTTACTGTATCATTACTGAATATTTATCTCAAGGATCATTAAGGGCATACTTGCACAAACTTGAGCACCAATCTCTTCCTTTGCATAAACTAATTGCAATTGCTTTAGATGTCGCTCGTGGCATGGAATACATTCACTCACAAGGCATAATTCATCGGGATCTTAAGCCTGAGAATGTTCTTATTGACGAGGACTTCCATCTGAAAATTGCAGATTTTGGTATAGCTTGTCCTGAGGCCTTTTTTGACCCATTAGCTGATGATCCCGGAACTTATCGATGGATGGCACCAGAGATGATCAAACATAAACCCTATGGCCGAAAGGTCGATGTGTACAGCTTTGGGCTTATGTTGTGGGAAATGGTGGCTGGTGCAATTCCTTACGAGGATATGACTCCCATTCAAGCAGCCTTTGCTGTTGTGAATAAGAATCTTAGGCCTGTTATCTCAAGTGATTGCCCATTGGCAATGCGAGCATTGATTGAGCAATGTTGGTCCATAAATCCAGACAAGAGACCCGATTTCTGGCAGGTTGTGAAGGTATTAGAGCAATTCGAGTCTTCGCTTGCCCATGATGGCTCACTGAATTTAATAGGGAACCCTCTGTCTAGTTTCCAAGACCATAAGAAAGGGCTCCTCCATTGGATTCAAAAGCTTGGTCCCCTACATCCTGAAGCGTTGCCCGTCCCCAAACCGAAATTCTCATAA | 1479 | 44.83 | MDEEANSWLRRTKFSHTVYHRWDSLRLNPVPFIIEPPRNSGLKSRPQSTSSPQKLNPDISKIQRSFISNKQRSLSPLPESNLSEVFEEAKSASKRFSTPTPRLRERTKEFKKKLFNKEPQDSKSANFKPSLNTSPLKHLATAKGSDKSKFRRDSSWTKYFESGGGRVTAVETADDWSVDLSELFLGLRFAHGAHSRLYHGKYKEEPVAVKIIRVPEDDENGVLGSRLEKQFTREVTLLSRLHHPNVIKFVAACRKPPVYCIITEYLSQGSLRAYLHKLEHQSLPLHKLIAIALDVARGMEYIHSQGIIHRDLKPENVLIDEDFHLKIADFGIACPEAFFDPLADDPGTYRWMAPEMIKHKPYGRKVDVYSFGLMLWEMVAGAIPYEDMTPIQAAFAVVNKNLRPVISSDCPLAMRALIEQCWSINPDKRPDFWQVVKVLEQFESSLAHDGSLNLIGNPLSSFQDHKKGLLHWIQKLGPLHPEALPVPKPKFS | 492 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 78269237 | 78273245 | - | Tan0014810.1 | Tan03g2483 | 747987 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g2483 | 492 | SMART | serkin_6 | 183 | 442 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g2483 | 492 | MobiDBLite | consensus disorder prediction | 114 | 147 | - | - | |
Tan03g2483 | 492 | MobiDBLite | consensus disorder prediction | 37 | 59 | - | - | |
Tan03g2483 | 492 | Pfam | Protein tyrosine and serine/threonine kinase | 190 | 439 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g2483 | 492 | Gene3D | Phosphorylase Kinase; domain 1 | 171 | 267 | - | - | |
Tan03g2483 | 492 | FunFam | serine/threonine-protein kinase HT1 | 268 | 457 | - | - | |
Tan03g2483 | 492 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 307 | 319 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g2483 | 492 | MobiDBLite | consensus disorder prediction | 120 | 139 | - | - | |
Tan03g2483 | 492 | CDD | STKc_MAP3K-like | 190 | 439 | - | - | |
Tan03g2483 | 492 | MobiDBLite | consensus disorder prediction | 41 | 59 | - | - | |
Tan03g2483 | 492 | FunFam | Serine/threonine-protein kinase isoform 1 | 173 | 267 | - | - | |
Tan03g2483 | 492 | Gene3D | Transferase(Phosphotransferase) domain 1 | 268 | 461 | - | - | |
Tan03g2483 | 492 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 72 | 441 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Tan03g2483 | 492 | SUPERFAMILY | Protein kinase-like (PK-like) | 166 | 439 | IPR011009 | - | |
Tan03g2483 | 492 | ProSiteProfiles | Protein kinase domain profile. | 183 | 443 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g2483 | 492 | PRINTS | Tyrosine kinase catalytic domain signature | 347 | 357 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g2483 | 492 | PRINTS | Tyrosine kinase catalytic domain signature | 263 | 276 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g2483 | 492 | PRINTS | Tyrosine kinase catalytic domain signature | 410 | 432 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g2483 | 492 | PRINTS | Tyrosine kinase catalytic domain signature | 301 | 319 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g2483 | 492 | PRINTS | Tyrosine kinase catalytic domain signature | 366 | 388 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g2483 | Tan-Chr3:78269237 | Tan05g2017 | Tan-Chr5:70162549 | 3.20E-97 | dispersed | |
Tan03g2483 | Tan-Chr3:78269237 | Tan03g2484 | Tan-Chr3:78269237 | 1.60E-234 | tandem | |
Tan05g0514 | Tan-Chr5:3547143 | Tan03g2483 | Tan-Chr3:78269237 | 6.70E-30 | transposed | |
Tan10g0174 | Tan-Chr10:1797450 | Tan03g2483 | Tan-Chr3:78269237 | 3.80E-24 | transposed | |
Tan03g2483 | Tan-Chr3:78269237 | Tan05g3305 | Tan-Chr5:84958429 | 2.80E-178 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67394 | PF07714 | PK_Tyr_Ser-Thr | 7.00E-60 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g2483 | - | - | - | 0.0 |