Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2484 ATGGACGAAGAGGCTAATTCTTGGCTTAGGAGAACGAAGTTTTCTCACACGGTTTATCATCGATGGGACTCATTAAGATTGAACCCTGTTCCTTTCATCATCGAACCACCTCGCAATTCCGGCTTGAAATCGAGGCCTCAGTCAACTTCATCTCCCCAGAAACTGAATCCTGATATTTCGAAGATTCAACGAAGTTTCATATCCAACAAGCAGAGGTCTCTGTCTCCTCTTCCCGAGAGCAACCTCTCTGAAGTTTTCGAGGAAGCAAAATCCGCGAGTAAGAGATTCTCAACTCCAACTCCTCGACTTAGAGAGCGAACGAAGGAATTCAAGAAGAAGCTATTCAACAAGGAACCTCAAGATTCAAAATCGGCCAATTTCAAGCCATCGTTGAATACCAGTCCTCTGAAACACCTAGCCACCGCGAAAGGGAGTGATAAGTCTAAGTTCCGGAGGGACTCATCCTGGACCAAGTATTTTGAGTCCGGAGGTGGAAGAGTCACCGCCGTGGAAACGGCCGATGACTGGAGTGTTGATCTCTCCGAGTTGTTTCTTGGGTTAAGGTTTGCTCATGGAGCTCACAGTCGTCTTTATCATGGAAAATACAAGGAGGAACCTGTTGCTGTTAAAATTATTCGAGTGCCTGAGGACGACGAAAATGGAGTGCTTGGTTCTCGATTGGAGAAGCAATTCACCAGAGAAGTTACTCTTTTATCTCGTCTCCATCATCCGAATGTTATAAAGTTTGTAGCGGCCTGTAGGAAGCCGCCAGTTTACTGTATCATTACTGAATATTTATCTCAAGGATCATTAAGGGCATACTTGCACAAACTTGAGCACCAATCTCTTCCTTTGCATAAACTAATTGCAATTGCTTTAGATGTCGCTCGTGGCATGGAATACATTCACTCACAAGGCATAATTCATCGGGATCTTAAGCCTGAGAATGTTCTTATTGACGAGGACTTCCATCTGAAAATTGCAGATTTTGGTATAGCTTGTCCTGAGGCCTTTTTTGACCCATTAGCTGATGATCCCGGAACTTATCGATGGATGGCACCAGAGATGATCAAACATAAACCCTATGGCCGAAAGGTCGATGTGTACAGCTTTGGGCTTATGTTGTGGGAAATGGTGGCTGGTGCAATTCCTTACGAGGATATGACTCCCATTCAAGCAGCCTTTGCTGTTGTGAATAAGGTCAGTTTTATTGATCACATGTTCCTTGACTATCTTCTTTTTCTGGTTTATCATGTGAGTCATTGTTTCTGA 1272 43.95 MDEEANSWLRRTKFSHTVYHRWDSLRLNPVPFIIEPPRNSGLKSRPQSTSSPQKLNPDISKIQRSFISNKQRSLSPLPESNLSEVFEEAKSASKRFSTPTPRLRERTKEFKKKLFNKEPQDSKSANFKPSLNTSPLKHLATAKGSDKSKFRRDSSWTKYFESGGGRVTAVETADDWSVDLSELFLGLRFAHGAHSRLYHGKYKEEPVAVKIIRVPEDDENGVLGSRLEKQFTREVTLLSRLHHPNVIKFVAACRKPPVYCIITEYLSQGSLRAYLHKLEHQSLPLHKLIAIALDVARGMEYIHSQGIIHRDLKPENVLIDEDFHLKIADFGIACPEAFFDPLADDPGTYRWMAPEMIKHKPYGRKVDVYSFGLMLWEMVAGAIPYEDMTPIQAAFAVVNKVSFIDHMFLDYLLFLVYHVSHCF 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 78269237 78273245 - Tan0014810.2 Tan03g2484 747988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2484 423 ProSiteProfiles Protein kinase domain profile. 183 423 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2484 423 MobiDBLite consensus disorder prediction 114 147 - -
Tan03g2484 423 SMART serkin_6 183 423 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2484 423 MobiDBLite consensus disorder prediction 37 59 - -
Tan03g2484 423 CDD STKc_MAP3K-like 190 400 - -
Tan03g2484 423 PRINTS Tyrosine kinase catalytic domain signature 347 357 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2484 423 PRINTS Tyrosine kinase catalytic domain signature 301 319 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2484 423 PRINTS Tyrosine kinase catalytic domain signature 263 276 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2484 423 PRINTS Tyrosine kinase catalytic domain signature 366 388 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2484 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2484 423 MobiDBLite consensus disorder prediction 120 139 - -
Tan03g2484 423 PANTHER SERINE-THREONINE PROTEIN KINASE 66 400 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan03g2484 423 FunFam Serine/threonine-protein kinase isoform 1 173 267 - -
Tan03g2484 423 MobiDBLite consensus disorder prediction 41 59 - -
Tan03g2484 423 SUPERFAMILY Protein kinase-like (PK-like) 170 409 IPR011009 -
Tan03g2484 423 Pfam Protein kinase domain 192 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2484 423 Gene3D Phosphorylase Kinase; domain 1 171 267 - -
Tan03g2484 423 Gene3D Transferase(Phosphotransferase) domain 1 268 411 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2484 Tan-Chr3:78269237 Tan05g3305 Tan-Chr5:84958429 6.00E-145 dispersed
Tan03g2483 Tan-Chr3:78269237 Tan03g2484 Tan-Chr3:78269237 1.60E-234 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67395 PF00069 Pkinase 5.20E-51 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2484 - - - 0.0