Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2513 ATGGAAGCCGCTGCTTCGGACGGCGAAAATCACAACCACAATAATGATAATATTAACAAAATTAGTAACTCAAGTGAGGGTCTTAGCAAGCCCAAGCGCCAGATGAAGACTCCGTATCAGCTTGAAACCCTCGAGAAAGCCTATGCCTTGGAGACGTACCCATCAGAGTCGATAAGGGCTGAACTGTCGGAGAAATTGGGGCTCACCGATCGGCAATTGCAGATGTGGTTTTGTCACCGGAGGTTGAAGGACAAGAAGGAACCGGCGAAGAAACCGCGAAAAGTGGCACATACGTTGCCTGATTCTCCCATTGACGAATTGAGAGTGGTAGCGGAGCCGGTTAGTGATTACGCTTCAGGGTCGGGCTCGGGTTCAAGTCCATACGGTGATGGTGGGTTACGTAATGTGGTACCTAGAAGTGGTGGAGACGATATGCCAATGATGAGAAGGTATTATGAAACTTCAAGGCCTGCTATGGAACTTAGAGCCATTGCTTGTGTGGAGTCGCAGTTAGGCGAACCATTGAGGGAGGACGGACCTATTCTTGGGATTGAATTTGATCCATTACCACCTGATGCTTTCGGAGCACCTATAGCGGCAGAACAGCAGAAGCGATCTGGACATTCATATGAACAACGGGATGCGAAATCTAATAAAGCAACTGCAAGGGCATTCCCCGAATATCCATTTATGCCAGACCAGCCTAATATTAGAGCTGATGCATATGGACCAATTGCCCCATCACATTATCCAGATTCATTAGTCGAGGTTTCAGCAGCCAGGACACCATCATTTTTGCTTGGTCATGAACAGTTGAACAGGAGCCATAATTACCATGGTCAGGTCTCAAGAGTTCGTCTTTTGCCTCAACAGGAGAAGCAGGGAGTTGCAATTCCATCTCCTGCTGATGATAACGCATTTGTTCCTGCAAGGGATTCTTTTGCAAGTATCAGAATGAATTCTCAGTTTACTGATCACCCAATTGTTGGACAAGAAACTTCGTATGTGTTGCCGGATGGGCATGTTTTTCCAAATGATGTCATCATTAGGATGGAAAGGAAACGCAAGAGTGAAGAAGCTCGTCTGAACAAAGAAGCTGAAGCCCATGAAATAAGAATGCGAAAAGAGCTTGAGAAACAAGATAATTTGAGGAAAAAGAGTGAAGAACGAATGAGGAAAGAAATGGAAAAGCAAGATCGTGAAAGAAGGAGAGAAGAGGAGAGGTTACTGCGAGAAAAGCAGCGGGAAGCAGAGAGATTGAAGCGTGAGGAAAGACGTGAACATGAACGGAGGGAAAAGTTTCTGCAGAGGGAATATTTGAGGGCTGAGAAGAGGAGGCAAAAAGAAGCTCTTCGCAAAGAAAAGGAAGCAGTGAGACGCAAAGCTGCTATTGAGAAGGCTACTGCTCGTAGAATTGCCCGTGAGTCTATGGAGCTTATTGAGGATGAACAGCTTGAACTGATGGAACTGGCAGCTGCAAACAAAGGATTACCCTCCATATTAAGTCTTGATCATGACACTTTGCAGAATCTTGAGTCTTTCCGAGATTATCTCGGTGCATTTCCACCCAAGTCTGTGCAATTGAAAAAACCTTTCAGCATTCAGCCTTGGATCAATTCCGAGGAGAACATCGGTAACCTTCTCATGGTCTGGAGATTTTTTATTACGTTTCCTGATGTTCTAGAGCTATGGCCCTTTACTCTTGATGAGTTTGTTCAAGCTCTTCATGACTATGATTCAAGATTACTGGGTGAGATTCACATTTGTCTTCTGAGACTGATTGTAAAAGATATTGAAGATGTTGCAAGGACACCTTCTGCTGGATTGGGAATGAATCAGAATGGTGTTGCCAACACTGGAGGTGGACATCCACAGATTGTTGAAGGGGCATATGCGTGGGGGTTTGACATTTGCAACTGGCAGAAACATTTAAACCCATTAACATGGCCTGAAATATTTCGACAATTAGCACTATCAGCTGGATTTGGACCTCAGTTGAAGAAGAGGAGCTTGGCATGGTCAGAAATGCGTAGCAACGATGAGGCTAAATGCGGTGAGGACGTAGTTTCTACTCTTCGCAATGGTTCAGCCGCTGAAAATGCATTTGCTATCATGCAAGAGAAAGGTTTGTTAGCTCCTCGAAGATCTAGGCATCGGCTAACTCCTGGAACTGTCAAATTTGCTGCTTTTCATGTCCTTTCACTAGAAGGCAGTGAGGGATTGACCGTACTAGAACTTGCGGAGAAGATACAGAGATCTGGACTTAGAGATCTGTCTACAAGCAAAACACCAGAGGCTTCCATTTCTGTTGCTTTGACTAGGGATACTAAGCTATTTGAAAGAATAGCTCCTTCAACATATCGTGTACGAGCTCCCTACAGGAAGGATCCAGATGATGCCGAGGAAATACTTTCAGTAGCCAGAAAGAAAATTCAGGTATTCCAGAATGGGTTTTTGGCTGGAGAAGATGCCGATGATGTTGAGAGAGATGAAGAATCTGAATGTGATGATGTTGATGAAGATCCAGAAGTTGATGATGTGGCAACAACATCTTTGGTGAATGAAGATGTTGGCAAAGGAGATGCTAACTTAGAAGTTGAGAATGAGAACTTATGTCATGATATTACTGGAAATCCACAAAATGAAATTCCCAAAGATATACCACCGTTCCCCCTAAGTGGCTCCAAGGATACAAAATATTTAAATATACCTACAGAGCAGTATGCTGCTGTTGATGAGACCACTAATGATCTAGATCAAGAAAATATGGAGATTGATGAAAGCAAGGAAGGTGAATCATGGATTCAAGGACTTACAGAAGGTGAATATCATGATCTTAGTGTTGAGGAGCGCTTAAATGCTCTTATTGCCTTAACCGGCATTGCAAATGAAGGAAACTCAATTCGCCTTGTTCTTGAGGATCGTTTGGAAGCTGCAAATTCTGTTAAGAAGCAAATGTTAGCAGAGGCTCAGATTGATAAATCTCGCCTAAAAGAAGAGATCATTACTAAATCTGATTTTCCAGTTCACATAGTGAGCAAGGTGGAAACTGAACTCAATGGTTCCGCTATGGAGGGTTGCCAAAGCCCTTTACCTGTTGCTGACAATAAGAACAATGAAACAACCCCAAGCACTGCAGAAAACCTTGGTAGTGTGCCTAATGAGAGGGCTACTTTAGTGCCAGATCTTTTCCCAGGCCCAGATAACTTTTTGGCTCAGCAATGTGGGCATGCTTCAAAGAGGTCACGTTCACAGTTAAAATCTTATATTGCCCACAGAGCTGAAGAAATGTACACATACAGGTCCTTGCCTCTTGGTCGAGATCGTAGGCGTAATCGATACTGGCAATTTGTTGCGTCTTCTTCAAGCAATGATCCTGGTTCTGGGAGAATCTTTGTTGAAATGTATGATGGAAAATGGAGGCTTATTGATTCTGAAGAGGGTTTTGATGCTCTTTCAATGGCTTTGGACACACGTGGGATTAGAGAATCACACCTACGCATAATGTTGCAAATGATAGAGACATCATTTAAGGAAAATGTTCGGAGGAATCTGCAGTGTGCCAATGTGATGGTTCAAAGTCGAATTACTCCTAAAGATGAAAATGATGAATCGAGTTCTAGTCCCGATTGCAACACCAGTTTTAATAGTCCTAGAAGTACTGTTTGTGGTTTAAATTTGGATACAATGGTAACATCATCTTCATTCAGAATTGAGCTTGGGAGAAATGAAAATGAAAAGAAGGCTGCATTTAGAAGGTATCAAGACTTGCAGAGGTGGATGTTAAGAGAGTGCTTTAGCACATCAACGTTATGTGCCATGAAATTTGGAGAAAAAAGGTGCACACCGCTGTTGGACATTTGTGATTCTTGTCTGTGCTTGTTTGATCCTCAACATTCTCACTGCTCTTCGTGCCATCAAACTTTTGGCACTAGTGGGAATGATATTAATTTTCTGGAACATAAACGTCACTGTGAGAGGGAAAGGAAGTCTTACCACTGGGATACACACGCTTTAGATGCATCTCTTCCCCTCAAAAGTAGATTGATCAAGGCCCTATTAGCTTTCATTGAGGTACATGTTCCATCAGAAGCTTTTCAATTGTTTTGGACAGAACATAGGAAAGATTGGGGTGTCAGGATGAAATTGTCATCAACTATTGAGGAGCTTCTACAGATATTGACCCTGTTTGAAAGTGTAATTAAGCGAGACTTTCTAAAATCAGACTTTACTACAACTGACGAGCACCTGAGCTCATGTTCCATATCTGGGAATGTTATACATGACGCAACAGATATTGGGTCTGTTCTTACGTTACCATGGATTCCACGGACTAGCGCAGCTGTTGCTTTAAGGCTTTGTGAGGTAGACGCATCCATTTATTTTATCGGGTGTGAGAAACCAGAGCCTGACCAGGATAGGGAAATTGGAGAACATATAAACTTTCCCAGTAGATATGTCCAGGTTAAGAATGATGAACGGACTAAACTAAACGAACTGGACTACGATGATCTGATGAAGAAAGAGAACTCAGCTGATCCAAAAAGTTTAAGGAACAACTACAAACGCAGTCGAGGGAGTCGAGATTATGGACGTCGTAGAAGGTGGCAGAAAAAAGTTAATGGTTCTAAATCTAGCCGTGTCCGGCCAAATGTCAAGAGTAATGAGAAGATGAATCAAGGACAGAGGGAACTGGGACAAGGAACACAGGTTATGGGGGTACGGGGCCGCCGCACGGTAAGGAAGAGAAGAGCTGAGAAGAGCATTCCTGATGATGGATTGTTGGGGCTAGGGCCTAGTTGTAGTACTCAGAATATAGATGAATCCCCCCCAAGAGATTATATTGGGGAATGGGAGGATGAAAAAATGGATAGGTTCGTGGATATGGAAGATGAAGAGAATGTGATGGAAGATGAAGAGAACGTTATGGAAGATGAAGAGAATGTAAACAACGTAGAAGCAATGGACTCAGACGAGGATGCACCGGGAGTTAGGTATGAGCAAGGGAGTTGGGAGTATGGTATTGATGATGATGGCACCTCCAACAGATGGAATGGTGATTTAGGGATGGGTAGTGATGAGGATGTGGATTTATCTGAGGACTACAATGGCACTGAAGAGGGTGGAAATGATGATATGGAGGAAGAGTTAGATGTTGATACCAGCGAGGACTCGGATTGCTCACCAAATAGGATAGGCAACAATGGTGGAGGAGAATCCGCTGTTTCCGATGATTATAGTGATTAA 5247 43.21 MEAAASDGENHNHNNDNINKISNSSEGLSKPKRQMKTPYQLETLEKAYALETYPSESIRAELSEKLGLTDRQLQMWFCHRRLKDKKEPAKKPRKVAHTLPDSPIDELRVVAEPVSDYASGSGSGSSPYGDGGLRNVVPRSGGDDMPMMRRYYETSRPAMELRAIACVESQLGEPLREDGPILGIEFDPLPPDAFGAPIAAEQQKRSGHSYEQRDAKSNKATARAFPEYPFMPDQPNIRADAYGPIAPSHYPDSLVEVSAARTPSFLLGHEQLNRSHNYHGQVSRVRLLPQQEKQGVAIPSPADDNAFVPARDSFASIRMNSQFTDHPIVGQETSYVLPDGHVFPNDVIIRMERKRKSEEARLNKEAEAHEIRMRKELEKQDNLRKKSEERMRKEMEKQDRERRREEERLLREKQREAERLKREERREHERREKFLQREYLRAEKRRQKEALRKEKEAVRRKAAIEKATARRIARESMELIEDEQLELMELAAANKGLPSILSLDHDTLQNLESFRDYLGAFPPKSVQLKKPFSIQPWINSEENIGNLLMVWRFFITFPDVLELWPFTLDEFVQALHDYDSRLLGEIHICLLRLIVKDIEDVARTPSAGLGMNQNGVANTGGGHPQIVEGAYAWGFDICNWQKHLNPLTWPEIFRQLALSAGFGPQLKKRSLAWSEMRSNDEAKCGEDVVSTLRNGSAAENAFAIMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSEGLTVLELAEKIQRSGLRDLSTSKTPEASISVALTRDTKLFERIAPSTYRVRAPYRKDPDDAEEILSVARKKIQVFQNGFLAGEDADDVERDEESECDDVDEDPEVDDVATTSLVNEDVGKGDANLEVENENLCHDITGNPQNEIPKDIPPFPLSGSKDTKYLNIPTEQYAAVDETTNDLDQENMEIDESKEGESWIQGLTEGEYHDLSVEERLNALIALTGIANEGNSIRLVLEDRLEAANSVKKQMLAEAQIDKSRLKEEIITKSDFPVHIVSKVETELNGSAMEGCQSPLPVADNKNNETTPSTAENLGSVPNERATLVPDLFPGPDNFLAQQCGHASKRSRSQLKSYIAHRAEEMYTYRSLPLGRDRRRNRYWQFVASSSSNDPGSGRIFVEMYDGKWRLIDSEEGFDALSMALDTRGIRESHLRIMLQMIETSFKENVRRNLQCANVMVQSRITPKDENDESSSSPDCNTSFNSPRSTVCGLNLDTMVTSSSFRIELGRNENEKKAAFRRYQDLQRWMLRECFSTSTLCAMKFGEKRCTPLLDICDSCLCLFDPQHSHCSSCHQTFGTSGNDINFLEHKRHCERERKSYHWDTHALDASLPLKSRLIKALLAFIEVHVPSEAFQLFWTEHRKDWGVRMKLSSTIEELLQILTLFESVIKRDFLKSDFTTTDEHLSSCSISGNVIHDATDIGSVLTLPWIPRTSAAVALRLCEVDASIYFIGCEKPEPDQDREIGEHINFPSRYVQVKNDERTKLNELDYDDLMKKENSADPKSLRNNYKRSRGSRDYGRRRRWQKKVNGSKSSRVRPNVKSNEKMNQGQRELGQGTQVMGVRGRRTVRKRRAEKSIPDDGLLGLGPSCSTQNIDESPPRDYIGEWEDEKMDRFVDMEDEENVMEDEENVMEDEENVNNVEAMDSDEDAPGVRYEQGSWEYGIDDDGTSNRWNGDLGMGSDEDVDLSEDYNGTEEGGNDDMEEELDVDTSEDSDCSPNRIGNNGGGESAVSDDYSD 1748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 78477165 78489441 - Tan0011856.1 Tan03g2513 748017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2513 1748 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677(InterPro)
Tan03g2513 1748 MobiDBLite consensus disorder prediction 200 219 - -
Tan03g2513 1748 MobiDBLite consensus disorder prediction 1507 1526 - -
Tan03g2513 1748 CDD homeodomain 32 87 IPR001356 GO:0003677(InterPro)
Tan03g2513 1748 Pfam HB1, ASXL, restriction endonuclease HTH domain 723 790 IPR007759 GO:0006355(InterPro)
Tan03g2513 1748 MobiDBLite consensus disorder prediction 1507 1615 - -
Tan03g2513 1748 MobiDBLite consensus disorder prediction 1726 1748 - -
Tan03g2513 1748 Coils Coil 348 468 - -
Tan03g2513 1748 MobiDBLite consensus disorder prediction 115 142 - -
Tan03g2513 1748 SMART HOX_1 29 91 IPR001356 GO:0003677(InterPro)
Tan03g2513 1748 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1748 IPR044977 GO:0006357(InterPro)
Tan03g2513 1748 SMART testlast3 541 600 IPR018501 -
Tan03g2513 1748 Coils Coil 911 931 - -
Tan03g2513 1748 Gene3D - 21 100 - -
Tan03g2513 1748 ProSiteProfiles HARE-type HTH domain profile. 723 792 IPR007759 GO:0006355(InterPro)
Tan03g2513 1748 Pfam Homeodomain 30 86 IPR001356 GO:0003677(InterPro)
Tan03g2513 1748 SUPERFAMILY Homeodomain-like 19 87 IPR009057 -
Tan03g2513 1748 MobiDBLite consensus disorder prediction 1196 1217 - -
Tan03g2513 1748 MobiDBLite consensus disorder prediction 1543 1567 - -
Tan03g2513 1748 ProSiteProfiles DDT domain profile. 541 600 IPR018501 -
Tan03g2513 1748 MobiDBLite consensus disorder prediction 1635 1748 - -
Tan03g2513 1748 MobiDBLite consensus disorder prediction 1 37 - -
Tan03g2513 1748 MobiDBLite consensus disorder prediction 1527 1542 - -
Tan03g2513 1748 MobiDBLite consensus disorder prediction 355 408 - -
Tan03g2513 1748 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 929 972 IPR028942 -
Tan03g2513 1748 Pfam DDT domain 542 597 IPR018501 -
Tan03g2513 1748 MobiDBLite consensus disorder prediction 8 31 - -
Tan03g2513 1748 Coils Coil 1629 1655 - -
Tan03g2513 1748 MobiDBLite consensus disorder prediction 1635 1654 - -
Tan03g2513 1748 Coils Coil 980 1000 - -
Tan03g2513 1748 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1100 1172 IPR028941 -
Tan03g2513 1748 MobiDBLite consensus disorder prediction 1693 1723 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0402 Tan-Chr2:3448200 Tan03g2513 Tan-Chr3:78477165 5.20E-304 dispersed
Tan02g1498 Tan-Chr2:64095764 Tan03g2513 Tan-Chr3:78477165 2.10E-68 dispersed
Tan03g2513 Tan-Chr3:78477165 Tan07g0786 Tan-Chr7:12574172 7.40E-16 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27097 PF15613 WSD 2.70E-13 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2513 - - - 0.0