Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g2513 | ATGGAAGCCGCTGCTTCGGACGGCGAAAATCACAACCACAATAATGATAATATTAACAAAATTAGTAACTCAAGTGAGGGTCTTAGCAAGCCCAAGCGCCAGATGAAGACTCCGTATCAGCTTGAAACCCTCGAGAAAGCCTATGCCTTGGAGACGTACCCATCAGAGTCGATAAGGGCTGAACTGTCGGAGAAATTGGGGCTCACCGATCGGCAATTGCAGATGTGGTTTTGTCACCGGAGGTTGAAGGACAAGAAGGAACCGGCGAAGAAACCGCGAAAAGTGGCACATACGTTGCCTGATTCTCCCATTGACGAATTGAGAGTGGTAGCGGAGCCGGTTAGTGATTACGCTTCAGGGTCGGGCTCGGGTTCAAGTCCATACGGTGATGGTGGGTTACGTAATGTGGTACCTAGAAGTGGTGGAGACGATATGCCAATGATGAGAAGGTATTATGAAACTTCAAGGCCTGCTATGGAACTTAGAGCCATTGCTTGTGTGGAGTCGCAGTTAGGCGAACCATTGAGGGAGGACGGACCTATTCTTGGGATTGAATTTGATCCATTACCACCTGATGCTTTCGGAGCACCTATAGCGGCAGAACAGCAGAAGCGATCTGGACATTCATATGAACAACGGGATGCGAAATCTAATAAAGCAACTGCAAGGGCATTCCCCGAATATCCATTTATGCCAGACCAGCCTAATATTAGAGCTGATGCATATGGACCAATTGCCCCATCACATTATCCAGATTCATTAGTCGAGGTTTCAGCAGCCAGGACACCATCATTTTTGCTTGGTCATGAACAGTTGAACAGGAGCCATAATTACCATGGTCAGGTCTCAAGAGTTCGTCTTTTGCCTCAACAGGAGAAGCAGGGAGTTGCAATTCCATCTCCTGCTGATGATAACGCATTTGTTCCTGCAAGGGATTCTTTTGCAAGTATCAGAATGAATTCTCAGTTTACTGATCACCCAATTGTTGGACAAGAAACTTCGTATGTGTTGCCGGATGGGCATGTTTTTCCAAATGATGTCATCATTAGGATGGAAAGGAAACGCAAGAGTGAAGAAGCTCGTCTGAACAAAGAAGCTGAAGCCCATGAAATAAGAATGCGAAAAGAGCTTGAGAAACAAGATAATTTGAGGAAAAAGAGTGAAGAACGAATGAGGAAAGAAATGGAAAAGCAAGATCGTGAAAGAAGGAGAGAAGAGGAGAGGTTACTGCGAGAAAAGCAGCGGGAAGCAGAGAGATTGAAGCGTGAGGAAAGACGTGAACATGAACGGAGGGAAAAGTTTCTGCAGAGGGAATATTTGAGGGCTGAGAAGAGGAGGCAAAAAGAAGCTCTTCGCAAAGAAAAGGAAGCAGTGAGACGCAAAGCTGCTATTGAGAAGGCTACTGCTCGTAGAATTGCCCGTGAGTCTATGGAGCTTATTGAGGATGAACAGCTTGAACTGATGGAACTGGCAGCTGCAAACAAAGGATTACCCTCCATATTAAGTCTTGATCATGACACTTTGCAGAATCTTGAGTCTTTCCGAGATTATCTCGGTGCATTTCCACCCAAGTCTGTGCAATTGAAAAAACCTTTCAGCATTCAGCCTTGGATCAATTCCGAGGAGAACATCGGTAACCTTCTCATGGTCTGGAGATTTTTTATTACGTTTCCTGATGTTCTAGAGCTATGGCCCTTTACTCTTGATGAGTTTGTTCAAGCTCTTCATGACTATGATTCAAGATTACTGGGTGAGATTCACATTTGTCTTCTGAGACTGATTGTAAAAGATATTGAAGATGTTGCAAGGACACCTTCTGCTGGATTGGGAATGAATCAGAATGGTGTTGCCAACACTGGAGGTGGACATCCACAGATTGTTGAAGGGGCATATGCGTGGGGGTTTGACATTTGCAACTGGCAGAAACATTTAAACCCATTAACATGGCCTGAAATATTTCGACAATTAGCACTATCAGCTGGATTTGGACCTCAGTTGAAGAAGAGGAGCTTGGCATGGTCAGAAATGCGTAGCAACGATGAGGCTAAATGCGGTGAGGACGTAGTTTCTACTCTTCGCAATGGTTCAGCCGCTGAAAATGCATTTGCTATCATGCAAGAGAAAGGTTTGTTAGCTCCTCGAAGATCTAGGCATCGGCTAACTCCTGGAACTGTCAAATTTGCTGCTTTTCATGTCCTTTCACTAGAAGGCAGTGAGGGATTGACCGTACTAGAACTTGCGGAGAAGATACAGAGATCTGGACTTAGAGATCTGTCTACAAGCAAAACACCAGAGGCTTCCATTTCTGTTGCTTTGACTAGGGATACTAAGCTATTTGAAAGAATAGCTCCTTCAACATATCGTGTACGAGCTCCCTACAGGAAGGATCCAGATGATGCCGAGGAAATACTTTCAGTAGCCAGAAAGAAAATTCAGGTATTCCAGAATGGGTTTTTGGCTGGAGAAGATGCCGATGATGTTGAGAGAGATGAAGAATCTGAATGTGATGATGTTGATGAAGATCCAGAAGTTGATGATGTGGCAACAACATCTTTGGTGAATGAAGATGTTGGCAAAGGAGATGCTAACTTAGAAGTTGAGAATGAGAACTTATGTCATGATATTACTGGAAATCCACAAAATGAAATTCCCAAAGATATACCACCGTTCCCCCTAAGTGGCTCCAAGGATACAAAATATTTAAATATACCTACAGAGCAGTATGCTGCTGTTGATGAGACCACTAATGATCTAGATCAAGAAAATATGGAGATTGATGAAAGCAAGGAAGGTGAATCATGGATTCAAGGACTTACAGAAGGTGAATATCATGATCTTAGTGTTGAGGAGCGCTTAAATGCTCTTATTGCCTTAACCGGCATTGCAAATGAAGGAAACTCAATTCGCCTTGTTCTTGAGGATCGTTTGGAAGCTGCAAATTCTGTTAAGAAGCAAATGTTAGCAGAGGCTCAGATTGATAAATCTCGCCTAAAAGAAGAGATCATTACTAAATCTGATTTTCCAGTTCACATAGTGAGCAAGGTGGAAACTGAACTCAATGGTTCCGCTATGGAGGGTTGCCAAAGCCCTTTACCTGTTGCTGACAATAAGAACAATGAAACAACCCCAAGCACTGCAGAAAACCTTGGTAGTGTGCCTAATGAGAGGGCTACTTTAGTGCCAGATCTTTTCCCAGGCCCAGATAACTTTTTGGCTCAGCAATGTGGGCATGCTTCAAAGAGGTCACGTTCACAGTTAAAATCTTATATTGCCCACAGAGCTGAAGAAATGTACACATACAGGTCCTTGCCTCTTGGTCGAGATCGTAGGCGTAATCGATACTGGCAATTTGTTGCGTCTTCTTCAAGCAATGATCCTGGTTCTGGGAGAATCTTTGTTGAAATGTATGATGGAAAATGGAGGCTTATTGATTCTGAAGAGGGTTTTGATGCTCTTTCAATGGCTTTGGACACACGTGGGATTAGAGAATCACACCTACGCATAATGTTGCAAATGATAGAGACATCATTTAAGGAAAATGTTCGGAGGAATCTGCAGTGTGCCAATGTGATGGTTCAAAGTCGAATTACTCCTAAAGATGAAAATGATGAATCGAGTTCTAGTCCCGATTGCAACACCAGTTTTAATAGTCCTAGAAGTACTGTTTGTGGTTTAAATTTGGATACAATGGTAACATCATCTTCATTCAGAATTGAGCTTGGGAGAAATGAAAATGAAAAGAAGGCTGCATTTAGAAGGTATCAAGACTTGCAGAGGTGGATGTTAAGAGAGTGCTTTAGCACATCAACGTTATGTGCCATGAAATTTGGAGAAAAAAGGTGCACACCGCTGTTGGACATTTGTGATTCTTGTCTGTGCTTGTTTGATCCTCAACATTCTCACTGCTCTTCGTGCCATCAAACTTTTGGCACTAGTGGGAATGATATTAATTTTCTGGAACATAAACGTCACTGTGAGAGGGAAAGGAAGTCTTACCACTGGGATACACACGCTTTAGATGCATCTCTTCCCCTCAAAAGTAGATTGATCAAGGCCCTATTAGCTTTCATTGAGGTACATGTTCCATCAGAAGCTTTTCAATTGTTTTGGACAGAACATAGGAAAGATTGGGGTGTCAGGATGAAATTGTCATCAACTATTGAGGAGCTTCTACAGATATTGACCCTGTTTGAAAGTGTAATTAAGCGAGACTTTCTAAAATCAGACTTTACTACAACTGACGAGCACCTGAGCTCATGTTCCATATCTGGGAATGTTATACATGACGCAACAGATATTGGGTCTGTTCTTACGTTACCATGGATTCCACGGACTAGCGCAGCTGTTGCTTTAAGGCTTTGTGAGGTAGACGCATCCATTTATTTTATCGGGTGTGAGAAACCAGAGCCTGACCAGGATAGGGAAATTGGAGAACATATAAACTTTCCCAGTAGATATGTCCAGGTTAAGAATGATGAACGGACTAAACTAAACGAACTGGACTACGATGATCTGATGAAGAAAGAGAACTCAGCTGATCCAAAAAGTTTAAGGAACAACTACAAACGCAGTCGAGGGAGTCGAGATTATGGACGTCGTAGAAGGTGGCAGAAAAAAGTTAATGGTTCTAAATCTAGCCGTGTCCGGCCAAATGTCAAGAGTAATGAGAAGATGAATCAAGGACAGAGGGAACTGGGACAAGGAACACAGGTTATGGGGGTACGGGGCCGCCGCACGGTAAGGAAGAGAAGAGCTGAGAAGAGCATTCCTGATGATGGATTGTTGGGGCTAGGGCCTAGTTGTAGTACTCAGAATATAGATGAATCCCCCCCAAGAGATTATATTGGGGAATGGGAGGATGAAAAAATGGATAGGTTCGTGGATATGGAAGATGAAGAGAATGTGATGGAAGATGAAGAGAACGTTATGGAAGATGAAGAGAATGTAAACAACGTAGAAGCAATGGACTCAGACGAGGATGCACCGGGAGTTAGGTATGAGCAAGGGAGTTGGGAGTATGGTATTGATGATGATGGCACCTCCAACAGATGGAATGGTGATTTAGGGATGGGTAGTGATGAGGATGTGGATTTATCTGAGGACTACAATGGCACTGAAGAGGGTGGAAATGATGATATGGAGGAAGAGTTAGATGTTGATACCAGCGAGGACTCGGATTGCTCACCAAATAGGATAGGCAACAATGGTGGAGGAGAATCCGCTGTTTCCGATGATTATAGTGATTAA | 5247 | 43.21 | MEAAASDGENHNHNNDNINKISNSSEGLSKPKRQMKTPYQLETLEKAYALETYPSESIRAELSEKLGLTDRQLQMWFCHRRLKDKKEPAKKPRKVAHTLPDSPIDELRVVAEPVSDYASGSGSGSSPYGDGGLRNVVPRSGGDDMPMMRRYYETSRPAMELRAIACVESQLGEPLREDGPILGIEFDPLPPDAFGAPIAAEQQKRSGHSYEQRDAKSNKATARAFPEYPFMPDQPNIRADAYGPIAPSHYPDSLVEVSAARTPSFLLGHEQLNRSHNYHGQVSRVRLLPQQEKQGVAIPSPADDNAFVPARDSFASIRMNSQFTDHPIVGQETSYVLPDGHVFPNDVIIRMERKRKSEEARLNKEAEAHEIRMRKELEKQDNLRKKSEERMRKEMEKQDRERRREEERLLREKQREAERLKREERREHERREKFLQREYLRAEKRRQKEALRKEKEAVRRKAAIEKATARRIARESMELIEDEQLELMELAAANKGLPSILSLDHDTLQNLESFRDYLGAFPPKSVQLKKPFSIQPWINSEENIGNLLMVWRFFITFPDVLELWPFTLDEFVQALHDYDSRLLGEIHICLLRLIVKDIEDVARTPSAGLGMNQNGVANTGGGHPQIVEGAYAWGFDICNWQKHLNPLTWPEIFRQLALSAGFGPQLKKRSLAWSEMRSNDEAKCGEDVVSTLRNGSAAENAFAIMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSEGLTVLELAEKIQRSGLRDLSTSKTPEASISVALTRDTKLFERIAPSTYRVRAPYRKDPDDAEEILSVARKKIQVFQNGFLAGEDADDVERDEESECDDVDEDPEVDDVATTSLVNEDVGKGDANLEVENENLCHDITGNPQNEIPKDIPPFPLSGSKDTKYLNIPTEQYAAVDETTNDLDQENMEIDESKEGESWIQGLTEGEYHDLSVEERLNALIALTGIANEGNSIRLVLEDRLEAANSVKKQMLAEAQIDKSRLKEEIITKSDFPVHIVSKVETELNGSAMEGCQSPLPVADNKNNETTPSTAENLGSVPNERATLVPDLFPGPDNFLAQQCGHASKRSRSQLKSYIAHRAEEMYTYRSLPLGRDRRRNRYWQFVASSSSNDPGSGRIFVEMYDGKWRLIDSEEGFDALSMALDTRGIRESHLRIMLQMIETSFKENVRRNLQCANVMVQSRITPKDENDESSSSPDCNTSFNSPRSTVCGLNLDTMVTSSSFRIELGRNENEKKAAFRRYQDLQRWMLRECFSTSTLCAMKFGEKRCTPLLDICDSCLCLFDPQHSHCSSCHQTFGTSGNDINFLEHKRHCERERKSYHWDTHALDASLPLKSRLIKALLAFIEVHVPSEAFQLFWTEHRKDWGVRMKLSSTIEELLQILTLFESVIKRDFLKSDFTTTDEHLSSCSISGNVIHDATDIGSVLTLPWIPRTSAAVALRLCEVDASIYFIGCEKPEPDQDREIGEHINFPSRYVQVKNDERTKLNELDYDDLMKKENSADPKSLRNNYKRSRGSRDYGRRRRWQKKVNGSKSSRVRPNVKSNEKMNQGQRELGQGTQVMGVRGRRTVRKRRAEKSIPDDGLLGLGPSCSTQNIDESPPRDYIGEWEDEKMDRFVDMEDEENVMEDEENVMEDEENVNNVEAMDSDEDAPGVRYEQGSWEYGIDDDGTSNRWNGDLGMGSDEDVDLSEDYNGTEEGGNDDMEEELDVDTSEDSDCSPNRIGNNGGGESAVSDDYSD | 1748 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 78477165 | 78489441 | - | Tan0011856.1 | Tan03g2513 | 748017 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g2513 | 1748 | ProSiteProfiles | 'Homeobox' domain profile. | 27 | 87 | IPR001356 | GO:0003677(InterPro) | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 200 | 219 | - | - | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 1507 | 1526 | - | - | |
Tan03g2513 | 1748 | CDD | homeodomain | 32 | 87 | IPR001356 | GO:0003677(InterPro) | |
Tan03g2513 | 1748 | Pfam | HB1, ASXL, restriction endonuclease HTH domain | 723 | 790 | IPR007759 | GO:0006355(InterPro) | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 1507 | 1615 | - | - | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 1726 | 1748 | - | - | |
Tan03g2513 | 1748 | Coils | Coil | 348 | 468 | - | - | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 115 | 142 | - | - | |
Tan03g2513 | 1748 | SMART | HOX_1 | 29 | 91 | IPR001356 | GO:0003677(InterPro) | |
Tan03g2513 | 1748 | PANTHER | HOMEOBOX-DDT DOMAIN PROTEIN RLT2 | 1 | 1748 | IPR044977 | GO:0006357(InterPro) | |
Tan03g2513 | 1748 | SMART | testlast3 | 541 | 600 | IPR018501 | - | |
Tan03g2513 | 1748 | Coils | Coil | 911 | 931 | - | - | |
Tan03g2513 | 1748 | Gene3D | - | 21 | 100 | - | - | |
Tan03g2513 | 1748 | ProSiteProfiles | HARE-type HTH domain profile. | 723 | 792 | IPR007759 | GO:0006355(InterPro) | |
Tan03g2513 | 1748 | Pfam | Homeodomain | 30 | 86 | IPR001356 | GO:0003677(InterPro) | |
Tan03g2513 | 1748 | SUPERFAMILY | Homeodomain-like | 19 | 87 | IPR009057 | - | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 1196 | 1217 | - | - | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 1543 | 1567 | - | - | |
Tan03g2513 | 1748 | ProSiteProfiles | DDT domain profile. | 541 | 600 | IPR018501 | - | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 1635 | 1748 | - | - | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 1527 | 1542 | - | - | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 355 | 408 | - | - | |
Tan03g2513 | 1748 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 929 | 972 | IPR028942 | - | |
Tan03g2513 | 1748 | Pfam | DDT domain | 542 | 597 | IPR018501 | - | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 8 | 31 | - | - | |
Tan03g2513 | 1748 | Coils | Coil | 1629 | 1655 | - | - | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 1635 | 1654 | - | - | |
Tan03g2513 | 1748 | Coils | Coil | 980 | 1000 | - | - | |
Tan03g2513 | 1748 | Pfam | Williams-Beuren syndrome DDT (WSD), D-TOX E motif | 1100 | 1172 | IPR028941 | - | |
Tan03g2513 | 1748 | MobiDBLite | consensus disorder prediction | 1693 | 1723 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0402 | Tan-Chr2:3448200 | Tan03g2513 | Tan-Chr3:78477165 | 5.20E-304 | dispersed | |
Tan02g1498 | Tan-Chr2:64095764 | Tan03g2513 | Tan-Chr3:78477165 | 2.10E-68 | dispersed | |
Tan03g2513 | Tan-Chr3:78477165 | Tan07g0786 | Tan-Chr7:12574172 | 7.40E-16 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27097 | PF15613 | WSD | 2.70E-13 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g2513 | - | - | - | 0.0 |