Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2514 ATGGAGTCGCAGTTTCTCTCACGCGCCACTTCCTTCGCCGGAGGCATTCCCACCCTCCGCAAGTTGCACAGAGAGACCACCGCCACCAACAACCACCTCTCCTTCGTTCACACCAGGCCGATCGCCGAGGGAGCCAACCTGATTTGGGGGCGACAATTACGGCCGTCTCTGCTTCTCGATAACCTCTCGGCGCCGAATCTAATCTCCGCCAAGCGGGAGACGGTTCGGCCTACCTATGCGGCGGCCTCTTCTTCTCCCGCCGGAGGCAGCGATTCCGCCGGGGAGGCGAAGGTTGCTCCGGTGGGTTTCTTCGAGAAGTATCCGGCGTTGGTCACCGGATTCTTCTTCTTCATGTGGTACTTCTTGAACGTGATTTTCAATATCCTCAACAAGAAGATCTATAATTACTTCCCCTATCCTTATTTTGTGTCGGTGATCCATTTGTTAGTTGGGGTGGTTTACTGTTTGATAAGCTGGGTTGTGGGTCTTCCTAAGCGAGCGCCTATTGACTCAACCCTCCTGAAGTTGCTGATTCCTGTAGCTTTCTGTCATGCACTTGGCCACGTCACTAGCAATGTTTCATTCGCAGCTGTTGCTGTCTCATTCACACACACAGTCAAAGCTCTGGAACCGTTCTTTAACGCCGCCGCTTCTCAATTCATTTTGGGACAATCCATTCCCATTACCTTGTGGCTTTCATTGGCTCCCGTTGTCATTGGTGTGTCAATGGCATCCTTGACTGAGCTTTCATTCAACTGGACTGGTTTCATCAGTGCTATGATTTCTAATATCTCATTTACCTACAGAAGTATTTATTCAAAGAAAGCCATGACTGACATGGACAGCACCAACGTCTACGCCTATATTTCCATCATTGCTCTCCTTTTCTGCATTCCACCTGCTGTAATTGTTGAGGGGCCTCAACTGCTGAAGTTTGGTTTCAATGATGCCATAGCTAAAGTTGGTCTAACCAAATTCGTCTCAGATCTCTTCTGGGTGGGAATGTTTTATCACCTTTACAATCAGTTAGCAACCAACACCCTGGAGAGGGTGGCACCACTTACCCATGCAGTTGGAAATGTGCTGAAACGTGTATTTGTGATTGGATTCTCCATCATTGTCTTTGGTAACAAAATTTCAACACAGACTGGTATTGGAACCAGCATTGCAATTGCAGGAGTCGCACTTTACTCTTACATCAAGGCTAAGATGGAAGAAGAGAAACGACGAACAAAGGTGGCTTGA 1245 48.27 MESQFLSRATSFAGGIPTLRKLHRETTATNNHLSFVHTRPIAEGANLIWGRQLRPSLLLDNLSAPNLISAKRETVRPTYAAASSSPAGGSDSAGEAKVAPVGFFEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLISWVVGLPKRAPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLFCIPPAVIVEGPQLLKFGFNDAIAKVGLTKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVALYSYIKAKMEEEKRRTKVA 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 78495374 78500363 - Tan0010535.1 Tan03g2514 748018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2514 414 PANTHER SOLUTE CARRIER FAMILY 35 104 402 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Tan03g2514 414 Pfam Triose-phosphate Transporter family 111 398 IPR004853 -
Tan03g2514 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 327 399 - -
Tan03g2514 414 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 110 408 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Tan03g2514 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 154 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2514 Tan-Chr3:78495374 Tan04g1011 Tan-Chr4:9011679 7.90E-150 dispersed
Tan03g2514 Tan-Chr3:78495374 Tan05g2003 Tan-Chr5:69968059 2.20E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2514 K15283 - csv:101220728 765.377