Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2527 ATGGGAAAGCATTCAAAGACCAGTTGCAAGTCGGCTTCCCACAGGCTCTTTAAGGATAAGGCAAAGAACCGGGTCGATGATCTGCAAAGCATATTTGTAGATTTGCAATATGCAAGGAAAGAGAGCCGCACAGTGGATGTGGCAGTTCTCGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAAGCTGAGCTGAACGAGCCCTCTCCGGCCTCCTCTTTGCAACAAGGTGGAAGTCTTGGGTCATTTTCATCGGACATTTGTCGATTGTTACAACTTTGTGAGGAGGATGATGATGCATCTAGTCCATTAGCTGCTCCTAAGCCCGAACCCAATGAACAAAATCTGCAGGTTGGGGATACTATGGAAGTTCAAGAGGGATTTAACATGAATCGTGTACACCAAGAACCAAGCTTCCCTCTTGTTGATCAATGCAAGAACTCCCCTTCAGGAGTTCATGGTATGGCTATGAATAACTTGGAAGGAGCTACATATTTGGAGTGTCATCAGTTTGATTTACATCAAGGCATTGAGCACAACTTTTACTCGTTCCTTAATGGTAGAGGTTTGTGTGGGGAGGGTGCAATTCCTCATGTTTCTAGCTACTGTCCCAGCATATGTCCTCCGCCTGCTGCTTTCTTAGGCCCCAAGTGTGCGCTATGGGATTGCCCACGACCTGCCCAAGGGTTGGATTGGTGTGAGGACTACTGTAGCAGTTTTCATGCTGCCTTAGCATTGAATGAAGGCCCTCCTGGAATGGGTCCAGTTTTACGACCTGGTGGAATCGGTCTGAAGGATGGTTTGCTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGTATTCCTGAATGTGAGGGAGCTGCCACGGCAAAATCCCCATGGAATGCTCCTGAGCTTTTTGATCTGTCAATATTGGAGGGTGAGATGATTAGGGAGTGGCTTTTCTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGAAATAGGAAGCAGAGGTCGTTGCCTGATTATAGTGGACGTGGTTGGCATGAGTCAAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAAAGATCTTATTACATGGATCCTCAGCCATTGAACCACTTTGAGTGGCATCTTTATGAATATGAAATCAATAAGTATGATGTCTGCGCTTTGTATAGATTGGAGCTGAAACTTGTTGATGGGAAAAAGAGTTCTAAGGCAAAGGTAACAAATGACTCGGTTGCTGATTTACAGAGGCAAATGGGGAGACTGACTGCTGAGTTTCCTGATAATAAACGCTTTGTCAAGGGGAGGACCAAAGTTAACACAAAAGTTGGTATTGGAAATGTTTACCCCTCAGCAAATAGGATCATGCCACCCAATGGAACATATGACTATATGCTTCATGCACAATATGATTACCTTGTGGAGAATTTGAGCGAATATTACCTTTAA 1449 44.79 MGKHSKTSCKSASHRLFKDKAKNRVDDLQSIFVDLQYARKESRTVDVAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSSDICRLLQLCEEDDDASSPLAAPKPEPNEQNLQVGDTMEVQEGFNMNRVHQEPSFPLVDQCKNSPSGVHGMAMNNLEGATYLECHQFDLHQGIEHNFYSFLNGRGLCGEGAIPHVSSYCPSICPPPAAFLGPKCALWDCPRPAQGLDWCEDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSILEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDVCALYRLELKLVDGKKSSKAKVTNDSVADLQRQMGRLTAEFPDNKRFVKGRTKVNTKVGIGNVYPSANRIMPPNGTYDYMLHAQYDYLVENLSEYYL 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 78603553 78607728 + Tan0007893.1 Tan03g2527 748031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2527 482 PANTHER TRANSCRIPTION FACTOR VOZ1 1 481 IPR039277 GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0045893(PANTHER)|GO:0048578(PANTHER)|GO:0048578(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2527 Tan-Chr3:78603553 Tan05g0926 Tan-Chr5:7440464 6.40E-143 dispersed
Tan03g2527 Tan-Chr3:78603553 Tan03g2528 Tan-Chr3:78603553 1.70E-217 tandem
Tan03g2527 Tan-Chr3:78603553 Tan05g0925 Tan-Chr5:7440464 6.40E-143 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27100 None None None None Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2527 - - - 0.0