Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2549 ATGGGTTCTGGAGACTGGTTTAAGACAGTAATTCGCTTAAAGAAAGTAAAAACCAGCAGTTCAAAACTTGCTAAGGAGAAGTCAAATGCTTTGAAACCGAATAATTTACAAAAAGATTCCTCGAAATTTAAAAATGGTGGTACTAATGGGAGCAGCAAGTCTCTTGGGATGCCAATTGAAGATGTAGCTGCAGTTCGGATTCAAACAGCATATCGAGCATATCGTGCCAGGAAAAATTTACGTCGCTTGAAAGGAGCTGTGAGACTGCAGAATCTGACTCAAGGCCACTCTGTTAGAAAGCATGCTACATCTACAATAGGTTACCTTCATTCATGGAGCAATATACAGGCTCAAATTAGGGCTCGTCGAATTTGTATGGTGACAGAAGGACGACTAAGACAAAAGAGATTGGAGAATCAACGAAAACTTGAGGCTAAGCTTCATGACATAGAGGTGGAGTGGTGTGGTGGTGCAGACACCATGGAGGAGATTCTTTCAAGGATACACGAGAGAGAAGAAGCAGCTGTTAAGCGTGAGCGTGCTATGGCATATGCATTCTCACATCAGTGGAGAGCAAACTCCAGTGAGATGTATGGGTTGGGTAAAGATGAACTTGGTAAAGCTGATTGGGGTTGGAGCTGGAAAGAACGATGGATTGCTGCTCGTCCATGGGAAAGCCGCATACCATCTCAGTTAGTTAGTCCGAAGAAATCGACAATTAGGCAATCGAACAAAGTCAGTAAGAAAAACTCACCATCTCCAAAAGCACGAGTTTTCGTTAAGCCTCCTTCCCCAAATGGGAAATCAACTCCAAAGGCTCGGAGGTTGTCTTATCCAGCAACTGAGAAAATCGAGAAACTGGCTACAGAAGAAAAGGGCGTCAAGAAAAGTGTTAAAGATGACGAAGGAAACACGAAGCAAGAAGAAACAGTGTCTTGA 939 43.13 MGSGDWFKTVIRLKKVKTSSSKLAKEKSNALKPNNLQKDSSKFKNGGTNGSSKSLGMPIEDVAAVRIQTAYRAYRARKNLRRLKGAVRLQNLTQGHSVRKHATSTIGYLHSWSNIQAQIRARRICMVTEGRLRQKRLENQRKLEAKLHDIEVEWCGGADTMEEILSRIHEREEAAVKRERAMAYAFSHQWRANSSEMYGLGKDELGKADWGWSWKERWIAARPWESRIPSQLVSPKKSTIRQSNKVSKKNSPSPKARVFVKPPSPNGKSTPKARRLSYPATEKIEKLATEEKGVKKSVKDDEGNTKQEETVS 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 78698596 78704359 + Tan0005666.1 Tan03g2549 748053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2549 312 ProSiteProfiles IQ motif profile. 82 111 - -
Tan03g2549 312 PANTHER IQ-DOMAIN 5-RELATED 40 263 - -
Tan03g2549 312 MobiDBLite consensus disorder prediction 23 55 - -
Tan03g2549 312 MobiDBLite consensus disorder prediction 231 312 - -
Tan03g2549 312 Gene3D - 60 105 - -
Tan03g2549 312 MobiDBLite consensus disorder prediction 278 312 - -
Tan03g2549 312 MobiDBLite consensus disorder prediction 18 55 - -
Tan03g2549 312 ProSiteProfiles IQ motif profile. 60 88 - -
Tan03g2549 312 MobiDBLite consensus disorder prediction 231 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0850 Tan-Chr1:8243214 Tan03g2549 Tan-Chr3:78698596 1.70E-57 dispersed
Tan03g2549 Tan-Chr3:78698596 Tan09g0678 Tan-Chr9:55436653 3.70E-35 dispersed
Tan03g2549 Tan-Chr3:78698596 Tan11g0812 Tan-Chr11:6799965 2.00E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2549 - - - 0.0