Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2584 ATGGCCGACCGGCCGGACCCCGACAAGAAGACCGAGACCACCAGGAAGGACATGCCGGCACTTCTTTTGGGCCGATACGAGATCGGGAAGCTCCTTGGCCATGGCACCTTCGCTAAGGTCTACCATGCCCGCAACATCAAAACTGACGAAAGCGTCGCCATTAAAGTTATCGACAAGGAGAAGATCCTCAAGGGTGGCCTAATCGCCCACATCAAACGCGAGATCTCAATCCTCCGCCGCGTCCGACACCCCAATATCGTGCAACTCTTCGAGGTTATGGCCACCAAGGCCAAGATCTACTTCGTTATGGAATATGTACGCGGCGGTGAGCTTTTCAAGAAGGTCTCCAAGGGCCGATTGAAGGAAGAGGTCGCTCGCAAGTACTTTCAGCAATTAATCTCCGCCGTTGCCTTTTGCCACGCGCGAGGCGTTTATCATCGCGACCTTAAACCGGAGAATTTGTTGCTCGATGAAAATGGGAATCTTAAGGTATCCGATTTTGGCCTCAGCGCCGTCTCCGATCAAATTCGACAAGATGGGTTGTTTCATACTTTTTGTGGTACACCAGCGTATGTTGCTCCGGAGGTTTTGGCCCGAAAGGGGTATGAGGCCGCTAAGGTCGATATTTGGTCATGTGGGGTTATTCTGTTCGTTCTGATGGCAGGTTATTTGCCCTTTCACGATCAAAATATTATGGCAATGTACAAGAAGATTTACAAGGGCGAGTTTCGTTGCCCGAGATGGTTCTCACCGGAGCTAATTCGACTCTTATCTCGTCTTTTGGATACAAATCCCGAAACCCGTTTCACAATTCCTGAAATTATGGAGAATAGATGGTTCAAAAAGGGGTACAAGCACATCAAATTCTACATCGAAGACGATAAGGTTTGCAGCGTTGAGGATGACAACGATGATGTCGATTCCTTGTCGGATCAATCTCAATCGGAATCGGATTCCGAAATTATTGAAACCAGAAGAAAGGTCGCTTCACTCCCAAGACCGGCAAGTTTGAATGCGTTTGACATCATTTCGTTTTCTCCTGGATTTGATCTTTCTGGGTTGTTTGAGGATGGAGGAGAAGAGGCAAGATTTGTGTCCAGTGCTCCGGTGTCGAAGATTATATCGAAATTGGAGGAGATTGCAAAATTGGTGAGTTTCACTGTGAGGAAGAAGGATTGCAGGGTAAGTTTAGAGGGGTCACGGGAAGGAGTAAAAGGGCCATTGACAATCGCGGCAGAGGTATTCGAGTTGACGCCTAAATTGGTGATGGTGGAGGTGAAGAGAAAAGGGGGAGATAAAGCAGAGTATGAACAGTTCTGTAATAACGAATTGAAACCGGCATTGTTGAATCTGAAGGTGGAGGAGTCTGCTGCTCCATCACATATACCATCGGATACTGAATGA 1404 47.72 MADRPDPDKKTETTRKDMPALLLGRYEIGKLLGHGTFAKVYHARNIKTDESVAIKVIDKEKILKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFKKVSKGRLKEEVARKYFQQLISAVAFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNIMAMYKKIYKGEFRCPRWFSPELIRLLSRLLDTNPETRFTIPEIMENRWFKKGYKHIKFYIEDDKVCSVEDDNDDVDSLSDQSQSESDSEIIETRRKVASLPRPASLNAFDIISFSPGFDLSGLFEDGGEEARFVSSAPVSKIISKLEEIAKLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEVFELTPKLVMVEVKRKGGDKAEYEQFCNNELKPALLNLKVEESAAPSHIPSDTE 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 78982431 78984642 - Tan0003658.1 Tan03g2584 748088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2584 467 ProSiteProfiles Protein kinase domain profile. 26 280 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2584 467 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524(InterPro)
Tan03g2584 467 FunFam Non-specific serine/threonine protein kinase 18 105 - -
Tan03g2584 467 MobiDBLite consensus disorder prediction 302 323 - -
Tan03g2584 467 Pfam Protein kinase domain 26 280 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2584 467 CDD STKc_SnRK3 25 279 - -
Tan03g2584 467 Gene3D Kinase associated domain 1, KA1 334 451 - -
Tan03g2584 467 Pfam NAF domain 334 390 IPR004041 GO:0007165(InterPro)
Tan03g2584 467 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 446 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Tan03g2584 467 SMART serkin_6 26 280 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2584 467 ProSiteProfiles NAF domain profile. 332 356 IPR018451 GO:0007165(InterPro)
Tan03g2584 467 SUPERFAMILY Protein kinase-like (PK-like) 22 319 IPR011009 -
Tan03g2584 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2584 467 Gene3D Transferase(Phosphotransferase) domain 1 17 333 - -
Tan03g2584 467 FunFam Non-specific serine/threonine protein kinase 16 326 - -
Tan03g2584 467 CDD CIPK_C 338 448 - -
Tan03g2584 467 FunFam Non-specific serine/threonine protein kinase 334 452 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2584 Tan-Chr3:78982431 Tan08g0370 Tan-Chr8:3345695 7.30E-144 dispersed
Tan03g2584 Tan-Chr3:78982431 Tan05g2507 Tan-Chr5:76422353 3.70E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67398 PF00069 Pkinase 7.20E-76 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2584 - - - 0.0