Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2598 ATGATGTCCAAATCGTATACAAATCTTTTAGATTTAGCTTCTGGGAATTTTCCCATTATGGGTCGTGAGAAGAAGCGACTTCCTCGAGTAATGACTGTTGCGGGGGTAATATCAGAGCTTGATGATGACCAGGCAAATAGTGTGACTTCTGAGGGACCTTCGTCACTTGTGCAAGACCGCATAATTATTGTTGCCAATCAGCTTCCTATTAAAGCTAAGCGTAGACCAGATAATAAAGGCTGGAGTTTTAGTTGGGATGAAGACTCTTTGCTGTGGCAGCTCAAGGATGGTTTGCCTGAAGATATGGAGGTTTTGTATGTAGGATCTTTGCGGGTGGATGTTGATTCTTCCGAACAAGATGATGTATCACAGCTTTTGTTGGAGAGGTTTAAGTGTGTTCCTGCGTTTCTGCCTCATGACATTTTATCAAAATTTTATCATGGTTTTTGTAAGCAGCAATTGTGGCCACTCTTCCATTATATGCTTCCATTCTCAGCAACTCATGGTGGCCGGTTTGATCGGTCTCTGTGGGAGGCATATGTAGCAGCAAATAAAATTTTTTCTCAAAGGGTGATTGAGGTCATAAACCCAGATGATGACTTTGTATGGATTCACGATTACCATTTAATGGTGCTGCCTTCTTTTTTGAGGAGAAGGTTTACACGATTGAGAATGGGATTTTTTCTTCACAGTCCATTTCCTTCGTCAGAAATATATAGGACTTTGCCAGTGAGGGAAGAGATTCTTAAGGCTCTTTTGAATGCAGACCTTATTGGTTTTCACACTTTTGACTATGCTCGACATTTCCTGTCTTGTTGTAGTCGGATGTTGGGTTTGGAATATCAGTCAAAGAGGGGTTATATTGGGTTGGAATATTTTGGAAGGACCGTGGGGATAAAGATCATGCCTGTTGGAATTCACATGGGCCAGATGGAGTCTGTGTTGAGACTTGCTGATAAAGACTGGAGGGTACAGGAACTCAAGCGACAGTTTGAAGGAAAAGTCGTTGTACTTGGAGTTGATGACATGGACATTTTTAAAGGGGTCAATCTGAAGTTGTTGGCAATGGAACAAATGCTAAGGCAACATCCAAAGTGGCAGGGTAGAGCCGTTTTTGTACAAATTGCAAACCCAGCTAGAGGAAGAGGGAAGGATCTTGAGGAAATACAGGATGAAATACAGGAATGCTGCAAGAGAATTAATGAAAGTTTTGGACAGCCAAATTATGAACCAGTTGTGTTCATTGATCGGCCTGTTTCTCTCACTGAAAGAGCTGCATATTATACTATTGCTGAATGTGTTGTGGTCACTGCGGTGAGGGATGGCATGAACCTAACTCCTTATGAGTACGTTGTCTGCAGACAGGGAACCTCTGGCTCTGGATCAGATTATAGCTCAGAAACAAATGGACCCCCAAAAAGCATGCTAGTCATATCAGAGTTCATGGGATGTTCCCCTTCTCTTAGTGGTGCAATACGGGTTAACCCATGGAACATTGAAGCTACTGCTGAAGCATTGAATGAGGCAATATCAATGGCTGATGCTGAGAAGCAATTACGCCATGAAAAGCATTACAAATATGTGAGTACGCATGATGTGGCTTACTGGTCAAAGAGTTTTTTCCAAGATATGGAAAGAACGTGTAAGGATCACTTCAGAAGACGGTGCTGGGGAATTGGGTTGGGCTTTGGATTCAGAGTTGTAGCACTTGATCCTAACTTTAGAAAGTTGTCTATTGATGCCATTGTAGCTGCATATTCGAGGTCTAAAAGGAGGGCTATACTGTTGGATTATGATGGCACTGTCATGCCACAAACTTCAATTGATAAGACCCCAAGTAGTCAAGTTATTTCAATTATAGATTCACTTTGTGATGATGTTAGGAATACTGTTTTTGTCGTCAGTGGAAGAGGGCGTGAAAGTTTGGGCAACTGGTTTTCTCCTTGCAATAAACTTGGGATTGCTGCAGAGCATGGCTATTTTATGAGGTGGTCTGCCGACAAGGACTGGGAAAATTGTGGTCAAGGTAGTGATTTTGGCTGGATACAGATCGCAGAGCCAGTCATGAAATTATATACTGAAGCTACTGATGGCTCTTCCATTGAAACCAAGGAAAGTGCCTTGGTGTGGCACCACCAGGATGCGGACCCTGATTTTGGTTGCAGCCAGGCCAAGGAACTGTTGGATCACCTTGAAAGTGTGCTCGCTAATGAACCAGTTGCTGTAAAAAGTGGTCAGTTTATTGTAGAAGTGAAGCCACAGGGAGTCAGTAAAGGTGTGGTGGCAGAAAAGATCTTTGCGACAATGGCAGATGCAGGAAGACGGGCTGATTTTGTGCTATGCATTGGTGATGATAGATCTGACGAAGACATGTTTGAGATCATTGGCAATGCAGTATCAAGTGGTGTCCTCTCTTCCAATACATTAGTTTTTGCATGCACAGTGGGACAGAAACCTAGCAAGGCCAAGTATTACTTGGATGACACAACTGAGGTCATAAACATGCTTGAAGCCCTTGCAGAAGTTTCAGACATCTCTTCTCCTCCAGAATCCCCTTGA 2559 42.87 MMSKSYTNLLDLASGNFPIMGREKKRLPRVMTVAGVISELDDDQANSVTSEGPSSLVQDRIIIVANQLPIKAKRRPDNKGWSFSWDEDSLLWQLKDGLPEDMEVLYVGSLRVDVDSSEQDDVSQLLLERFKCVPAFLPHDILSKFYHGFCKQQLWPLFHYMLPFSATHGGRFDRSLWEAYVAANKIFSQRVIEVINPDDDFVWIHDYHLMVLPSFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTVGIKIMPVGIHMGQMESVLRLADKDWRVQELKRQFEGKVVVLGVDDMDIFKGVNLKLLAMEQMLRQHPKWQGRAVFVQIANPARGRGKDLEEIQDEIQECCKRINESFGQPNYEPVVFIDRPVSLTERAAYYTIAECVVVTAVRDGMNLTPYEYVVCRQGTSGSGSDYSSETNGPPKSMLVISEFMGCSPSLSGAIRVNPWNIEATAEALNEAISMADAEKQLRHEKHYKYVSTHDVAYWSKSFFQDMERTCKDHFRRRCWGIGLGFGFRVVALDPNFRKLSIDAIVAAYSRSKRRAILLDYDGTVMPQTSIDKTPSSQVISIIDSLCDDVRNTVFVVSGRGRESLGNWFSPCNKLGIAAEHGYFMRWSADKDWENCGQGSDFGWIQIAEPVMKLYTEATDGSSIETKESALVWHHQDADPDFGCSQAKELLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGVVAEKIFATMADAGRRADFVLCIGDDRSDEDMFEIIGNAVSSGVLSSNTLVFACTVGQKPSKAKYYLDDTTEVINMLEALAEVSDISSPPESP 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 79127018 79132538 + Tan0020847.1 Tan03g2598 748102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2598 852 Gene3D - 721 847 IPR023214 -
Tan03g2598 852 Gene3D - 591 697 IPR023214 -
Tan03g2598 852 FunFam Trehalose-6-phosphate synthase 2 675 754 - -
Tan03g2598 852 Gene3D Glycogen Phosphorylase B; 50 320 - -
Tan03g2598 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Tan03g2598 852 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 549 - -
Tan03g2598 852 Gene3D Glycogen Phosphorylase B; 321 530 - -
Tan03g2598 852 CDD HAD_TPP 593 834 - -
Tan03g2598 852 Pfam Trehalose-phosphatase 595 829 IPR003337 GO:0005992(InterPro)
Tan03g2598 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Tan03g2598 852 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 851 - -
Tan03g2598 852 NCBIfam trehalose-phosphatase 589 840 IPR003337 GO:0005992(InterPro)
Tan03g2598 852 SUPERFAMILY HAD-like 592 840 IPR036412 -
Tan03g2598 852 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Tan03g2598 852 NCBIfam HAD-IIB family hydrolase 594 800 IPR006379 -
Tan03g2598 852 CDD GT20_TPS 60 545 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Tan03g2598 852 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 842 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER)
Tan03g2598 852 FunFam Alpha,alpha-trehalose-phosphate synthase 314 529 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2598 Tan-Chr3:79127018 Tan04g1479 Tan-Chr4:18882171 0.00E+00 dispersed
Tan03g2598 Tan-Chr3:79127018 Tan03g2599 Tan-Chr3:79127018 0.00E+00 tandem
Tan02g0192 Tan-Chr2:1658752 Tan03g2598 Tan-Chr3:79127018 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2598 K16055 - csv:101213082 1675.99