Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g2599 | ATGATGTCCAAATCGTATACAAATCTTTTAGATTTAGCTTCTGGGAATTTTCCCATTATGGGTCGTGAGAAGAAGCGACTTCCTCGAGTAATGACTGTTGCGGGGGTAATATCAGAGCTTGATGATGACCAGGCAAATAGTGTGACTTCTGAGGGACCTTCGTCACTTGTGCAAGACCGCATAATTATTGTTGCCAATCAGCTTCCTATTAAAGCTAAGCGTAGACCAGATAATAAAGGCTGGAGTTTTAGTTGGGATGAAGACTCTTTGCTGTGGCAGCTCAAGGATGGTTTGCCTGAAGATATGGAGGTTTTGTATGTAGGATCTTTGCGGGTGGATGTTGATTCTTCCGAACAAGATGATGTATCACAGCTTTTGTTGGAGAGGTTTAAGTGTGTTCCTGCGTTTCTGCCTCATGACATTTTATCAAAATTTTATCATGGTTTTTGTAAGCAGCAATTGTGGCCACTCTTCCATTATATGCTTCCATTCTCAGCAACTCATGGTGGCCGGTTTGATCGGTCTCTGTGGGAGGCATATGTAGCAGCAAATAAAATTTTTTCTCAAAGGGTGATTGAGGTCATAAACCCAGATGATGACTTTGTATGGATTCACGATTACCATTTAATGGTGCTGCCTTCTTTTTTGAGGAGAAGGTTTACACGATTGAGAATGGGATTTTTTCTTCACAGTCCATTTCCTTCGTCAGAAATATATAGGACTTTGCCAGTGAGGGAAGAGATTCTTAAGGCTCTTTTGAATGCAGACCTTATTGGTTTTCACACTTTTGACTATGCTCGACATTTCCTGTCTTGTTGTAGTCGGATGTTGGGTTTGGAATATCAGTCAAAGAGGGGTTATATTGGGTTGGAATATTTTGGAAGGACCGTGGGGATAAAGATCATGCCTGTTGGAATTCACATGGGCCAGATGGAGTCTGTGTTGAGACTTGCTGATAAAGACTGGAGGGTACAGGAACTCAAGCGACAGTTTGAAGGAAAAGTCGTTGTACTTGGAGTTGATGACATGGACATTTTTAAAGGGGTCAATCTGAAGTTGTTGGCAATGGAACAAATGCTAAGGCAACATCCAAAGTGGCAGGGTAGAGCCGTTTTTGTACAAATTGCAAACCCAGCTAGAGGAAGAGGGAAGGATCTTGAGGAAATACAGGATGAAATACAGGAATGCTGCAAGAGAATTAATGAAAGTTTTGGACAGCCAAATTATGAACCAGTTGTGTTCATTGATCGGCCTGTTTCTCTCACTGAAAGAGCTGCATATTATACTATTGCTGAATGTGTTGTGGTCACTGCGGTGAGGGATGGCATGAACCTAACTCCTTATGAGTACGTTGTCTGCAGACAGGGAACCTCTGGCTCTGGATCAGATTATAGCTCAGAAACAAATGGACCCCCAAAAAGCATGCTAGTCATATCAGAGTTCATGGGATGTTCCCCTTCTCTTAGTGGTGCAATACGGGTTAACCCATGGAACATTGAAGCTACTGCTGAAGCATTGAATGAGGCAATATCAATGGCTGATGCTGAGAAGCAATTACGCCATGAAAAGCATTACAAATATGTGAGTACGCATGATGTGGCTTACTGGTCAAAGAGTTTTTTCCAAGATATGGAAAGAACGTGTAAGGATCACTTCAGAAGACGGTGCTGGGGAATTGGGTTGGGCTTTGGATTCAGAGTTGTAGCACTTGATCCTAACTTTAGAAAGTTGTCTATTGATGCCATTGTAGCTGCATATTCGAGGTCTAAAAGGAGGGCTATACTGTTGGATTATGATGGCACTGTCATGCCACAAACTTCAATTGATAAGACCCCAAGTAGTCAAGTTATTTCAATTATAGATTCACTTTGTGATGATGTTAGGAATACTGTTTTTGTCGTCAGTGGAAGAGGGCGTGAAAGTTTGGGCAACTGGTTTTCTCCTTGCAATAAACTTGGGATTGCTGCAGAGCATGGCTATTTTATGAGGTGGTCTGCCGACAAGGACTGGGAAAATTGTGGTCAAGGTAGTGATTTTGGCTGGATACAGATCGCAGAGCCAGTCATGAAATTATATACTGAAGCTACTGATGGCTCTTCCATTGAAACCAAGGAAAGTGCCTTGGTGTGGCACCACCAGGATGCGGACCCTGATTTTGGTTGCAGCCAGGCCAAGGAACTGTTGGATCACCTTGAAAGTGTGCTCGCTAATGAACCAGTTGCTGTAAAAAGTGGTCAGTTTATTGTAGAAGTGAAGCCACAGGTATTTTCTTCTACTTTAAACTTTTGA | 2289 | 42.38 | MMSKSYTNLLDLASGNFPIMGREKKRLPRVMTVAGVISELDDDQANSVTSEGPSSLVQDRIIIVANQLPIKAKRRPDNKGWSFSWDEDSLLWQLKDGLPEDMEVLYVGSLRVDVDSSEQDDVSQLLLERFKCVPAFLPHDILSKFYHGFCKQQLWPLFHYMLPFSATHGGRFDRSLWEAYVAANKIFSQRVIEVINPDDDFVWIHDYHLMVLPSFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTVGIKIMPVGIHMGQMESVLRLADKDWRVQELKRQFEGKVVVLGVDDMDIFKGVNLKLLAMEQMLRQHPKWQGRAVFVQIANPARGRGKDLEEIQDEIQECCKRINESFGQPNYEPVVFIDRPVSLTERAAYYTIAECVVVTAVRDGMNLTPYEYVVCRQGTSGSGSDYSSETNGPPKSMLVISEFMGCSPSLSGAIRVNPWNIEATAEALNEAISMADAEKQLRHEKHYKYVSTHDVAYWSKSFFQDMERTCKDHFRRRCWGIGLGFGFRVVALDPNFRKLSIDAIVAAYSRSKRRAILLDYDGTVMPQTSIDKTPSSQVISIIDSLCDDVRNTVFVVSGRGRESLGNWFSPCNKLGIAAEHGYFMRWSADKDWENCGQGSDFGWIQIAEPVMKLYTEATDGSSIETKESALVWHHQDADPDFGCSQAKELLDHLESVLANEPVAVKSGQFIVEVKPQVFSSTLNF | 762 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 79127018 | 79132538 | + | Tan0020847.2 | Tan03g2599 | 748103 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g2599 | 762 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 53 | 312 | - | - | |
Tan03g2599 | 762 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 24 | 757 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER) | |
Tan03g2599 | 762 | Pfam | Glycosyltransferase family 20 | 60 | 545 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Tan03g2599 | 762 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 59 | 549 | - | - | |
Tan03g2599 | 762 | Pfam | Trehalose-phosphatase | 595 | 756 | IPR003337 | GO:0005992(InterPro) | |
Tan03g2599 | 762 | Gene3D | Glycogen Phosphorylase B; | 50 | 320 | - | - | |
Tan03g2599 | 762 | NCBIfam | trehalose-phosphatase | 589 | 755 | IPR003337 | GO:0005992(InterPro) | |
Tan03g2599 | 762 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 314 | 529 | - | - | |
Tan03g2599 | 762 | Gene3D | Glycogen Phosphorylase B; | 321 | 530 | - | - | |
Tan03g2599 | 762 | Gene3D | - | 594 | 674 | IPR023214 | - | |
Tan03g2599 | 762 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 591 | 708 | - | - | |
Tan03g2599 | 762 | FunFam | Trehalose-6-phosphate synthase 2 | 675 | 754 | - | - | |
Tan03g2599 | 762 | CDD | GT20_TPS | 60 | 545 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Tan03g2599 | 762 | SUPERFAMILY | HAD-like | 592 | 754 | IPR036412 | - | |
Tan03g2599 | 762 | Gene3D | - | 675 | 754 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0192 | Tan-Chr2:1658752 | Tan03g2599 | Tan-Chr3:79127018 | 0.00E+00 | dispersed | |
Tan03g2599 | Tan-Chr3:79127018 | Tan04g1480 | Tan-Chr4:18882171 | 1.1e-311 | dispersed | |
Tan03g2598 | Tan-Chr3:79127018 | Tan03g2599 | Tan-Chr3:79127018 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g2599 | K16055 | - | csv:101213082 | 1496.1 |