Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2599 ATGATGTCCAAATCGTATACAAATCTTTTAGATTTAGCTTCTGGGAATTTTCCCATTATGGGTCGTGAGAAGAAGCGACTTCCTCGAGTAATGACTGTTGCGGGGGTAATATCAGAGCTTGATGATGACCAGGCAAATAGTGTGACTTCTGAGGGACCTTCGTCACTTGTGCAAGACCGCATAATTATTGTTGCCAATCAGCTTCCTATTAAAGCTAAGCGTAGACCAGATAATAAAGGCTGGAGTTTTAGTTGGGATGAAGACTCTTTGCTGTGGCAGCTCAAGGATGGTTTGCCTGAAGATATGGAGGTTTTGTATGTAGGATCTTTGCGGGTGGATGTTGATTCTTCCGAACAAGATGATGTATCACAGCTTTTGTTGGAGAGGTTTAAGTGTGTTCCTGCGTTTCTGCCTCATGACATTTTATCAAAATTTTATCATGGTTTTTGTAAGCAGCAATTGTGGCCACTCTTCCATTATATGCTTCCATTCTCAGCAACTCATGGTGGCCGGTTTGATCGGTCTCTGTGGGAGGCATATGTAGCAGCAAATAAAATTTTTTCTCAAAGGGTGATTGAGGTCATAAACCCAGATGATGACTTTGTATGGATTCACGATTACCATTTAATGGTGCTGCCTTCTTTTTTGAGGAGAAGGTTTACACGATTGAGAATGGGATTTTTTCTTCACAGTCCATTTCCTTCGTCAGAAATATATAGGACTTTGCCAGTGAGGGAAGAGATTCTTAAGGCTCTTTTGAATGCAGACCTTATTGGTTTTCACACTTTTGACTATGCTCGACATTTCCTGTCTTGTTGTAGTCGGATGTTGGGTTTGGAATATCAGTCAAAGAGGGGTTATATTGGGTTGGAATATTTTGGAAGGACCGTGGGGATAAAGATCATGCCTGTTGGAATTCACATGGGCCAGATGGAGTCTGTGTTGAGACTTGCTGATAAAGACTGGAGGGTACAGGAACTCAAGCGACAGTTTGAAGGAAAAGTCGTTGTACTTGGAGTTGATGACATGGACATTTTTAAAGGGGTCAATCTGAAGTTGTTGGCAATGGAACAAATGCTAAGGCAACATCCAAAGTGGCAGGGTAGAGCCGTTTTTGTACAAATTGCAAACCCAGCTAGAGGAAGAGGGAAGGATCTTGAGGAAATACAGGATGAAATACAGGAATGCTGCAAGAGAATTAATGAAAGTTTTGGACAGCCAAATTATGAACCAGTTGTGTTCATTGATCGGCCTGTTTCTCTCACTGAAAGAGCTGCATATTATACTATTGCTGAATGTGTTGTGGTCACTGCGGTGAGGGATGGCATGAACCTAACTCCTTATGAGTACGTTGTCTGCAGACAGGGAACCTCTGGCTCTGGATCAGATTATAGCTCAGAAACAAATGGACCCCCAAAAAGCATGCTAGTCATATCAGAGTTCATGGGATGTTCCCCTTCTCTTAGTGGTGCAATACGGGTTAACCCATGGAACATTGAAGCTACTGCTGAAGCATTGAATGAGGCAATATCAATGGCTGATGCTGAGAAGCAATTACGCCATGAAAAGCATTACAAATATGTGAGTACGCATGATGTGGCTTACTGGTCAAAGAGTTTTTTCCAAGATATGGAAAGAACGTGTAAGGATCACTTCAGAAGACGGTGCTGGGGAATTGGGTTGGGCTTTGGATTCAGAGTTGTAGCACTTGATCCTAACTTTAGAAAGTTGTCTATTGATGCCATTGTAGCTGCATATTCGAGGTCTAAAAGGAGGGCTATACTGTTGGATTATGATGGCACTGTCATGCCACAAACTTCAATTGATAAGACCCCAAGTAGTCAAGTTATTTCAATTATAGATTCACTTTGTGATGATGTTAGGAATACTGTTTTTGTCGTCAGTGGAAGAGGGCGTGAAAGTTTGGGCAACTGGTTTTCTCCTTGCAATAAACTTGGGATTGCTGCAGAGCATGGCTATTTTATGAGGTGGTCTGCCGACAAGGACTGGGAAAATTGTGGTCAAGGTAGTGATTTTGGCTGGATACAGATCGCAGAGCCAGTCATGAAATTATATACTGAAGCTACTGATGGCTCTTCCATTGAAACCAAGGAAAGTGCCTTGGTGTGGCACCACCAGGATGCGGACCCTGATTTTGGTTGCAGCCAGGCCAAGGAACTGTTGGATCACCTTGAAAGTGTGCTCGCTAATGAACCAGTTGCTGTAAAAAGTGGTCAGTTTATTGTAGAAGTGAAGCCACAGGTATTTTCTTCTACTTTAAACTTTTGA 2289 42.38 MMSKSYTNLLDLASGNFPIMGREKKRLPRVMTVAGVISELDDDQANSVTSEGPSSLVQDRIIIVANQLPIKAKRRPDNKGWSFSWDEDSLLWQLKDGLPEDMEVLYVGSLRVDVDSSEQDDVSQLLLERFKCVPAFLPHDILSKFYHGFCKQQLWPLFHYMLPFSATHGGRFDRSLWEAYVAANKIFSQRVIEVINPDDDFVWIHDYHLMVLPSFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTVGIKIMPVGIHMGQMESVLRLADKDWRVQELKRQFEGKVVVLGVDDMDIFKGVNLKLLAMEQMLRQHPKWQGRAVFVQIANPARGRGKDLEEIQDEIQECCKRINESFGQPNYEPVVFIDRPVSLTERAAYYTIAECVVVTAVRDGMNLTPYEYVVCRQGTSGSGSDYSSETNGPPKSMLVISEFMGCSPSLSGAIRVNPWNIEATAEALNEAISMADAEKQLRHEKHYKYVSTHDVAYWSKSFFQDMERTCKDHFRRRCWGIGLGFGFRVVALDPNFRKLSIDAIVAAYSRSKRRAILLDYDGTVMPQTSIDKTPSSQVISIIDSLCDDVRNTVFVVSGRGRESLGNWFSPCNKLGIAAEHGYFMRWSADKDWENCGQGSDFGWIQIAEPVMKLYTEATDGSSIETKESALVWHHQDADPDFGCSQAKELLDHLESVLANEPVAVKSGQFIVEVKPQVFSSTLNF 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 79127018 79132538 + Tan0020847.2 Tan03g2599 748103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2599 762 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Tan03g2599 762 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 757 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER)
Tan03g2599 762 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Tan03g2599 762 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 549 - -
Tan03g2599 762 Pfam Trehalose-phosphatase 595 756 IPR003337 GO:0005992(InterPro)
Tan03g2599 762 Gene3D Glycogen Phosphorylase B; 50 320 - -
Tan03g2599 762 NCBIfam trehalose-phosphatase 589 755 IPR003337 GO:0005992(InterPro)
Tan03g2599 762 FunFam Alpha,alpha-trehalose-phosphate synthase 314 529 - -
Tan03g2599 762 Gene3D Glycogen Phosphorylase B; 321 530 - -
Tan03g2599 762 Gene3D - 594 674 IPR023214 -
Tan03g2599 762 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Tan03g2599 762 FunFam Trehalose-6-phosphate synthase 2 675 754 - -
Tan03g2599 762 CDD GT20_TPS 60 545 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Tan03g2599 762 SUPERFAMILY HAD-like 592 754 IPR036412 -
Tan03g2599 762 Gene3D - 675 754 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0192 Tan-Chr2:1658752 Tan03g2599 Tan-Chr3:79127018 0.00E+00 dispersed
Tan03g2599 Tan-Chr3:79127018 Tan04g1480 Tan-Chr4:18882171 1.1e-311 dispersed
Tan03g2598 Tan-Chr3:79127018 Tan03g2599 Tan-Chr3:79127018 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2599 K16055 - csv:101213082 1496.1