Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2619 ATGAAGAGTCCAGTGAGATTTAGGTTGGGGAAACAATCGTCCCTAGCACCGGATGGGCATCTTGATTTGTTGGAGGAGCTAGTCAACGAGCATGAAACTGTGGTGGAGATCGATCCGAGGGTGCGGTTGATGTATTTGGCCAATGAAGGTGATTTGGAAGGGATTAATGAACTGTTGGATTCGGGAGTCGATGTCAATTTCCATGATATCGATAATCGGACGGCTCTGCATATTGCTGCTTGCCAGGGATTCGCCGACGTTGTCGATTTGTTGCTCGAACGTGGCGCTCAAGTTGACTCCAAAGATCGCTGGGGGAGCACGCCTCTTAGGGATGCTGTACATTACAAAAACCACGATGTGATCAAACTTTTGGAGCAGCATGGTGCAAAGCCTCTGGTGGCCCCCATGCTCGTCAAGAATGCCCGTGAAGTGCCAGATTATGAAATTGATCCTAAGGAACTTGATTTTACCAACAGTGTGAACATTACCAAGGGAACATTCCGCATAGCATCTTGGCGTGGAACTGAGGTTGCTGTGAAAGTGCTTGGAGAAGATCTATTCACTGACGAGGATAAAGTGAAGGCTTTCAGAGATGAGCTTGCATTGCTTCAGAAAATACGACACCCCAATGTTGTCCAGTTTCTAGGTGCTGTTACTCAAAGTTGCCCGATGATGATCATTACAGAATATTTGCCGAAGGGAGATCTTGGAGTATTATTGAGTAGAAAACGAGCAATAAAAACAATGACCGTTGTGAGACTTGCCCTTGATATTGCAAGAAATATTCTGAGGGATGATTCTGGCCACCTGAAAGTAGCAGACTTTGGAGTTAGCAAGTTATTGACAGTTAAAGATACACCTTCGACTTGTTCAGATACTTCTAGAAGATATCAGGCTCCGGAGGTTTTCAAAAATGAAGAATATGATACTAAGGTGGACGTATTTTCATTTGCTTTGATTCTACAAGAGATGATTGAAGCCTGTCCTCCATTTCCTGATGAGTCAGATAGTGAAGTTCCTACATTATATGCGGCAGGAGAACGCCCCCTATTTAGAGCACCAGTTAAACGTTATGCAAATGGATTAAAAGAGCTAATTGAAGAATGCTGGAACGAGAAGCCAATTAAGAGACCGACTTTTAGGCAGATAATAACCCAGCTGGAATTCATTTACAACAGATTCGGTCATAAGAGGCGCTGGAAGGTAGCTCATTGCCCCTCTGCTTTTGCTCGTCTCCCCATCCCTAGAATTGTTTTAGTGCATAATCTTCAAAGATGA 1278 44.05 MKSPVRFRLGKQSSLAPDGHLDLLEELVNEHETVVEIDPRVRLMYLANEGDLEGINELLDSGVDVNFHDIDNRTALHIAACQGFADVVDLLLERGAQVDSKDRWGSTPLRDAVHYKNHDVIKLLEQHGAKPLVAPMLVKNAREVPDYEIDPKELDFTNSVNITKGTFRIASWRGTEVAVKVLGEDLFTDEDKVKAFRDELALLQKIRHPNVVQFLGAVTQSCPMMIITEYLPKGDLGVLLSRKRAIKTMTVVRLALDIARNILRDDSGHLKVADFGVSKLLTVKDTPSTCSDTSRRYQAPEVFKNEEYDTKVDVFSFALILQEMIEACPPFPDESDSEVPTLYAAGERPLFRAPVKRYANGLKELIEECWNEKPIKRPTFRQIITQLEFIYNRFGHKRRWKVAHCPSAFARLPIPRIVLVHNLQR 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 79250923 79256059 + Tan0013203.1 Tan03g2619 748123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2619 425 Gene3D Transferase(Phosphotransferase) domain 1 244 404 - -
Tan03g2619 425 FunFam Integrin-linked protein kinase family 23 147 - -
Tan03g2619 425 SUPERFAMILY Protein kinase-like (PK-like) 164 394 IPR011009 -
Tan03g2619 425 FunFam serine/threonine-protein kinase STY46-like 149 232 - -
Tan03g2619 425 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Tan03g2619 425 SUPERFAMILY Ankyrin repeat 19 132 IPR036770 -
Tan03g2619 425 Pfam Ankyrin repeats (3 copies) 43 131 IPR002110 GO:0005515(InterPro)
Tan03g2619 425 Pfam Protein kinase domain 171 386 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2619 425 Gene3D - 16 143 IPR036770 -
Tan03g2619 425 PIRSF ILK 2 409 - -
Tan03g2619 425 Gene3D Phosphorylase Kinase; domain 1 148 231 - -
Tan03g2619 425 ProSiteProfiles Protein kinase domain profile. 121 390 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2619 425 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 61 388 IPR051681 GO:0004674(PANTHER)
Tan03g2619 425 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515(InterPro)
Tan03g2619 425 SMART ANK_2a 104 133 IPR002110 GO:0005515(InterPro)
Tan03g2619 425 SMART ANK_2a 38 67 IPR002110 GO:0005515(InterPro)
Tan03g2619 425 SMART ANK_2a 71 100 IPR002110 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2619 Tan-Chr3:79250923 Tan05g0639 Tan-Chr5:4753182 4.80E-110 dispersed
Tan03g2619 Tan-Chr3:79250923 Tan05g2543 Tan-Chr5:76764397 5.80E-124 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67403 PF07714 PK_Tyr_Ser-Thr 1.20E-21 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2619 - - - 0.0