Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2624 ATGGAGAAATCAACTTTCTTTTGCTTTCTACTGCTGCTCCTCCTCCTCCTCCCTCTAATTCAACAAGCCTCTTCTTCACACAATCAAAAACAGGCTTACATTGTGTACTTTGGAGAGCATGATGGAGAAAAGGCATGGAAGGAGATAGAAGAAATCCACCATTCGTATTTGGTGTCTGTAAAAGACACTGAAGAAGATGCAAAATCCTCTCTTCTTTACAGCTACAAACACACCATCAATGGCTTTGCTGCAATTCTTACCGAACAAGAAGCCTCCAAACTCTCAGAATTGGAGGAAGTGGTGAGTGTAATTGAGAGTAAAAAGTACAGCATGCACACAACAAGATCATGGGAGTTTTCTGGGGTTGAAGAAAACAAACCCAGAATTAATGACTTGGTTTCTAAAGCCAAGTATGGAAAAGATGTGGTCATTGGAATGCTTGACAGTGGTGTGTGGCCAAAATCCAAGAGCTTTAGTGATAAAGGAATGGGACCCATTCCAAAATCATGGAAGGGAATCTGCCAAACAGGACCTGGTTTTGAATCATGTAATAGGAAGATAATTGGAGGTAGATATTATCTAAAAGGATATGAGTATCACTACGGTCGTTTAAATGAAACAACGGACTACCGATCACCGTGCGATAAGGACGGCCATGGATCACACACCGCCTCCATTGCCGGCGGCCGGAGGGTGTACAATGTCTCAGCCTTCGGTGGCGTGGCTTGGGGCACGGCTTCCGGTGGTGCCCCGGGGGTCCGGCTGGCAATATACAAAGTTTGTTGGGCAATTCCCGACCAAATGAAAATTATGGGAAATGTTTGCTTCGACACTGACATGTTAGCAGCCATGGACGACGCCATTGCCGACGGCGTCCATGTTCTGAGCCTCTCCATTGGAAAATCGGATCCGTACAACTATACCGATGACGGAATCGCCATCGGAGCTCTGCACGCCGTTAAAAGAGACATTGTGGTGTCATGTAGCGCCGGAAATTTTGGCCCTACGCCGTCAGCGTTGACCAATATTGCACCCTGGATCATCACCGTCGGTGCTAGCACTGTGGATCGGGAATTTTACTCTCCTGTCCTCCTCGGAAATGGAATGAAGATTAAGGGATTGTCGGTGGCTCCATCGAAGTTGAAGTGGAAGAAGATGTACCCATTGGTGTATGCTGTAGATATACAAAAGCCACATGTACCCCGCAACGAATCCGGACAATGTGTTGCAGGTTCACTTTCACACGAGAAGGCCAAAGGAAAGATTGTGCTGTGCTACAGAGGAGAAGGAATCAGCATATACGCCGGCAGCCTCGAAGTGAGAAGGTCCGGCGGCGCCGGAATGATACTGGGGAACGTGCCGGCGGTGGGATCGAGACTGCATGCCGATCCCCATTTTGTTCCGGCAACGGCGGTGTCTTACGAGGATGCAAATATGATCCTCAAATATATAAAATCTCACGCAAATCCAACTGCAACTATTGTTCCACCCATCACCATCTATGGCTCTAGGCCGGCGCCGGCCATGGCCAACTTCTCAAGTAGAGGTCCAAACCTCATCGATCCTCATTTTCTCAAGCCTGATATAACAGCACCGGGAGTGGACATACTAGCAGCATGGTCAGAAGAAGATTCCCCGACAAAACTCCCAAAACGCTTTGACTCTCGTATTGTCAAATACAATATCTACTCCGGCACTTCCATGTCCTGTCCCCACGTCTCCGCCGCCGCCGCTCTCCTCCGTGCCATCCACCCCACCTGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACCACCGCCGGCACCACCAACAAATACGGCCACCCCATCACCGACGACTCCACCCCGGACAACTCCCCAGCCACCCCTTTCTCGTTCGGCTCCGGCCACTTCCGCCCCTCCAAGGCGGCGGACCCGGGCCTTGTCTACGACGCGAATTACACCGACTATCTCCACTACCTATGCGGCCTCAAAATGAACTCCATTGACCCTTCCTTCACGTGCCCTCCACGTGCTAATTTCCATCCCCACGACCTCAATTACCCTTCCATTGCTATCCCTAAACTGAGAGGCGCAGTGAGGATCAAAAGGACGGTGACCCACGTGGGCGGCGGCGGAGGTAAAAGTGTGTACTTTTTTCAGAGCCGGGCACCGGCGGGTGTGGTGTTGAGAGCTTCTCCTAATGTATTGTACTTCGATGGCGGAGTTGGGCAGAGAAAAACTTTCACGATTACGGTGAGTGGGAAAGTGAAAGGCGGCGTTGATGGAAGTGGATATTCTTTTGGTTGGTTTGCTTGGACTGATGGGATTCACCATGTTAGAAGCCCAATTGCTGTTTCTTCAACTTAA 2349 50.23 MEKSTFFCFLLLLLLLLPLIQQASSSHNQKQAYIVYFGEHDGEKAWKEIEEIHHSYLVSVKDTEEDAKSSLLYSYKHTINGFAAILTEQEASKLSELEEVVSVIESKKYSMHTTRSWEFSGVEENKPRINDLVSKAKYGKDVVIGMLDSGVWPKSKSFSDKGMGPIPKSWKGICQTGPGFESCNRKIIGGRYYLKGYEYHYGRLNETTDYRSPCDKDGHGSHTASIAGGRRVYNVSAFGGVAWGTASGGAPGVRLAIYKVCWAIPDQMKIMGNVCFDTDMLAAMDDAIADGVHVLSLSIGKSDPYNYTDDGIAIGALHAVKRDIVVSCSAGNFGPTPSALTNIAPWIITVGASTVDREFYSPVLLGNGMKIKGLSVAPSKLKWKKMYPLVYAVDIQKPHVPRNESGQCVAGSLSHEKAKGKIVLCYRGEGISIYAGSLEVRRSGGAGMILGNVPAVGSRLHADPHFVPATAVSYEDANMILKYIKSHANPTATIVPPITIYGSRPAPAMANFSSRGPNLIDPHFLKPDITAPGVDILAAWSEEDSPTKLPKRFDSRIVKYNIYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTAGTTNKYGHPITDDSTPDNSPATPFSFGSGHFRPSKAADPGLVYDANYTDYLHYLCGLKMNSIDPSFTCPPRANFHPHDLNYPSIAIPKLRGAVRIKRTVTHVGGGGGKSVYFFQSRAPAGVVLRASPNVLYFDGGVGQRKTFTITVSGKVKGGVDGSGYSFGWFAWTDGIHHVRSPIAVSST 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 79321570 79331193 + Tan0006558.1 Tan03g2624 748128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2624 782 FunFam Subtilisin-like protease SBT5.3 21 112 - -
Tan03g2624 782 Gene3D - 356 501 - -
Tan03g2624 782 Gene3D - 654 782 - -
Tan03g2624 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 777 IPR045051 -
Tan03g2624 782 Pfam Fibronectin type-III domain 678 779 IPR041469 -
Tan03g2624 782 CDD Peptidases_S8_3 109 600 IPR034197 -
Tan03g2624 782 Gene3D Peptidase S8/S53 domain 141 650 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan03g2624 782 PRINTS Subtilisin serine protease family (S8) signature 564 580 IPR015500 -
Tan03g2624 782 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Tan03g2624 782 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Tan03g2624 782 SUPERFAMILY Subtilisin-like 112 641 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan03g2624 782 FunFam Subtilisin-like protease SBT1.5 141 367 - -
Tan03g2624 782 Pfam PA domain 387 479 IPR003137 -
Tan03g2624 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 565 575 IPR023828 -
Tan03g2624 782 CDD PA_subtilisin_like 363 494 - -
Tan03g2624 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 112 IPR037045 -
Tan03g2624 782 ProSiteProfiles Serine proteases, subtilase domain profile. 116 637 - -
Tan03g2624 782 Pfam Subtilase family 139 629 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan03g2624 782 FunFam subtilisin-like protease SBT1.5 356 501 - -
Tan03g2624 782 Pfam Peptidase inhibitor I9 33 112 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2624 Tan-Chr3:79321570 Tan06g0124 Tan-Chr6:1147046 9.00E-155 dispersed
Tan03g2624 Tan-Chr3:79321570 Tan02g1756 Tan-Chr2:81557999 3.60E-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2624 - - - 0.0