Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2663 ATGGAGAAAGAGCCTCTTCTTCCATATATGAGCCCAAGAGGGAAACCACCTTCTCTACCTCCTCAATTATGTCCACTCCCTGAAAATGATGAAATTACTCTGCCTATGACGCCCACGGAGTTCAAAGACCGCCTGATCTTTGGCCCTTCATCTTCCCCTCAAGATGTTTCTCCTGTGTTCGACGCTTTGACGCTATCTCTTTCCTCGTCCAGACCCTCTGCTTCATCTTCTCTTCAAGACCCATCTTCCCCTTTGGACTCGAAATCCCAATCGCAGTCTCAACAGGGGTGGCTCGTGGATTCCAATTACTCATGGCACAAAAGCAACCTCCATCGCTCCAAAACAGCACCTGCCATGGCGGTCATCAACGATGTCAACCATTCGCAGGAGCCCAAGCCACAATTTGGTAAACAATCTATAATCCGCCAAGCTGTTGTTCTTCTAATTATGTACTTATCGTTGGGCGTGCTTATCTATTGGATTAATCGCGATAAGTTTTCGGCTACCGAGACTCATCCTGTGGTCGACGCATTGTATTTTTGCATTGTAACAATGTGCACTATTGGGTATGGAGATATTACGCCGAATAGTGCGGCGACGAAGCTGTTCTCAGTTTTGTTTGTGTTGGTGGGCTTTGGGTTTATTGATATATTGCTGTCTGGAATGGTCAGTTATGTGCTTGATTTGCAGGAGAGTTATTTGTTAAGGAATGTAAAGAGGGGGGTGCAGCATGAATCGGGGAAGTCCTATATAATTGATGTGAAGAAGGGAAGAATGAGGATCAGAATGAAAGTGGCATTGGCCTTGGGTGTTGTGATACTTTGTATAGGAATTGGCATGGGTGTTATGCATTTTGTTGAGGACCTGGGGTGGTTGGATTCATTTTACCTTTCAGTTATGTCTGTGACAACGGTTGGATATGGTGATCAGGCATTCAAGTCGATGACTGGTCGTATTTTTGCTTCAATCTGGTTGCTTGTATCAACCCTTGCTGTTGCTCGGGCGTTCCTTTATTTAGCAGAGGCAAGAGTTGATAAGCGGCATAGGATGATGGCAAAATGGATACTTGGTCAGGATATGACTGTCTCTGAGTTTCTTGCTGCTGATATTGACAACAATGGCTTTGTGAGTAGGTCAGAATATGTGGTATACAAGCTGAAGGAGATGGGTAAGGTATCAGAGAAAGATGTCATGCAGATATCTAATAACTTTGATAGGTTAGACACTGGCAAATGTGGGAAGATTACACTGGCTGATCTCTTGGAAAGTCATCACTGA 1278 44.52 MEKEPLLPYMSPRGKPPSLPPQLCPLPENDEITLPMTPTEFKDRLIFGPSSSPQDVSPVFDALTLSLSSSRPSASSSLQDPSSPLDSKSQSQSQQGWLVDSNYSWHKSNLHRSKTAPAMAVINDVNHSQEPKPQFGKQSIIRQAVVLLIMYLSLGVLIYWINRDKFSATETHPVVDALYFCIVTMCTIGYGDITPNSAATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLRNVKRGVQHESGKSYIIDVKKGRMRIRMKVALALGVVILCIGIGMGVMHFVEDLGWLDSFYLSVMSVTTVGYGDQAFKSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADIDNNGFVSRSEYVVYKLKEMGKVSEKDVMQISNNFDRLDTGKCGKITLADLLESHH 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 79677610 79682634 + Tan0011080.1 Tan03g2663 748167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2663 425 MobiDBLite consensus disorder prediction 71 92 - -
Tan03g2663 425 Gene3D - 270 333 - -
Tan03g2663 425 PRINTS Two pore domain K+ channel signature 183 211 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan03g2663 425 PRINTS Two pore domain K+ channel signature 303 312 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan03g2663 425 FunFam Two-pore potassium channel 5 129 239 - -
Tan03g2663 425 Gene3D - 137 237 - -
Tan03g2663 425 SUPERFAMILY EF-hand 364 421 IPR011992 -
Tan03g2663 425 SUPERFAMILY Voltage-gated potassium channels 140 226 - -
Tan03g2663 425 MobiDBLite consensus disorder prediction 10 24 - -
Tan03g2663 425 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 145 372 IPR003280 GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(InterPro)|GO:0071805(PANTHER)
Tan03g2663 425 Pfam Ion channel 272 341 IPR013099 -
Tan03g2663 425 Pfam Ion channel 147 226 IPR013099 -
Tan03g2663 425 SUPERFAMILY Voltage-gated potassium channels 255 362 - -
Tan03g2663 425 Gene3D - 334 425 - -
Tan03g2663 425 FunFam Two-pore potassium channel 3 248 362 - -
Tan03g2663 425 MobiDBLite consensus disorder prediction 1 30 - -
Tan03g2663 425 ProSitePatterns EF-hand calcium-binding domain. 369 381 IPR018247 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2663 Tan-Chr3:79677610 Tan05g1889 Tan-Chr5:65513505 3.60E-49 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2663 K05389 - csv:101220017 744.191